Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.18□□□□□ -2.06
SMIM28A0A1B0GU29 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SMIM28A0A1B0GU29 RNU6-641P-201ENST00000384006 107 ntBASIC2.18□□□□□ -2.06
SMIM28A0A1B0GU29 RNY3P9-201ENST00000384727 106 ntBASIC2.18□□□□□ -2.06
SMIM28A0A1B0GU29 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.18□□□□□ -2.06
SMIM28A0A1B0GU29 RNU2-39P-201ENST00000410604 198 ntBASIC2.18□□□□□ -2.06
SMIM28A0A1B0GU29 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.18□□□□□ -2.06
SMIM28A0A1B0GU29 AF274854.1-201ENST00000413236 615 ntBASIC2.18□□□□□ -2.06
SMIM28A0A1B0GU29 CALM2P2-201ENST00000428512 440 ntBASIC2.18□□□□□ -2.06
SMIM28A0A1B0GU29 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.18□□□□□ -2.06
SMIM28A0A1B0GU29 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.18□□□□□ -2.06
SMIM28A0A1B0GU29 CR769767.1-201ENST00000436337 346 ntBASIC2.18□□□□□ -2.06
SMIM28A0A1B0GU29 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.18□□□□□ -2.06
SMIM28A0A1B0GU29 AP000852.1-201ENST00000472460 573 ntBASIC2.18□□□□□ -2.06
SMIM28A0A1B0GU29 RPL21P99-201ENST00000480369 423 ntBASIC2.18□□□□□ -2.06
SMIM28A0A1B0GU29 RBBP4P6-201ENST00000508098 202 ntBASIC2.18□□□□□ -2.06
SMIM28A0A1B0GU29 RNU6-123P-201ENST00000516163 102 ntBASIC2.18□□□□□ -2.06
SMIM28A0A1B0GU29 RNU6-572P-201ENST00000516724 80 ntBASIC2.18□□□□□ -2.06
SMIM28A0A1B0GU29 SNORA31.19-201ENST00000517079 126 ntBASIC2.18□□□□□ -2.06
SMIM28A0A1B0GU29 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.18□□□□□ -2.06
SMIM28A0A1B0GU29 AC021739.1-201ENST00000559631 174 ntBASIC2.18□□□□□ -2.06
SMIM28A0A1B0GU29 MIR3117-201ENST00000584034 78 ntBASIC2.18□□□□□ -2.06
SMIM28A0A1B0GU29 AC126118.1-201ENST00000607744 628 ntBASIC2.18□□□□□ -2.06
SMIM28A0A1B0GU29 AC093648.1-201ENST00000623546 606 ntBASIC2.18□□□□□ -2.06
SMIM28A0A1B0GU29 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SMIM28A0A1B0GU29 ZNF355P-201ENST00000427301 3216 ntBASIC2.18□□□□□ -2.06
SMIM28A0A1B0GU29 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SMIM28A0A1B0GU29 FARSBP1-201ENST00000435808 1778 ntBASIC2.18□□□□□ -2.06
SMIM28A0A1B0GU29 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.17□□□□□ -2.06
SMIM28A0A1B0GU29 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SMIM28A0A1B0GU29 SNORA75-201ENST00000384158 137 ntBASIC2.17□□□□□ -2.06
SMIM28A0A1B0GU29 SNORA40C-201ENST00000391285 128 ntBASIC2.17□□□□□ -2.06
SMIM28A0A1B0GU29 CISD1P1-201ENST00000393907 327 ntBASIC2.17□□□□□ -2.06
SMIM28A0A1B0GU29 RNU6-1025P-201ENST00000410629 104 ntBASIC2.17□□□□□ -2.06
SMIM28A0A1B0GU29 EEF1A1P40-201ENST00000412883 573 ntBASIC2.17□□□□□ -2.06
SMIM28A0A1B0GU29 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.17□□□□□ -2.06
SMIM28A0A1B0GU29 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.17□□□□□ -2.06
SMIM28A0A1B0GU29 MTCO3P30-201ENST00000426425 670 ntBASIC2.17□□□□□ -2.06
SMIM28A0A1B0GU29 TOMM20P4-201ENST00000427861 435 ntBASIC2.17□□□□□ -2.06
SMIM28A0A1B0GU29 RPS15AP9-201ENST00000439856 381 ntBASIC2.17□□□□□ -2.06
SMIM28A0A1B0GU29 USP9YP8-201ENST00000441913 500 ntBASIC2.17□□□□□ -2.06
SMIM28A0A1B0GU29 BRK1P2-201ENST00000442875 223 ntBASIC2.17□□□□□ -2.06
SMIM28A0A1B0GU29 AC092001.1-201ENST00000453012 261 ntBASIC2.17□□□□□ -2.06
SMIM28A0A1B0GU29 AC233279.1-201ENST00000455300 423 ntBASIC2.17□□□□□ -2.06
SMIM28A0A1B0GU29 AL121769.1-201ENST00000469473 401 ntBASIC2.17□□□□□ -2.06
SMIM28A0A1B0GU29 AC022493.1-201ENST00000492984 337 ntBASIC2.17□□□□□ -2.06
SMIM28A0A1B0GU29 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.17□□□□□ -2.06
SMIM28A0A1B0GU29 FAM92A1P2-202ENST00000504766 877 ntBASIC2.17□□□□□ -2.06
SMIM28A0A1B0GU29 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.17□□□□□ -2.06
SMIM28A0A1B0GU29 Y_RNA.688-201ENST00000516565 95 ntBASIC2.17□□□□□ -2.06
SMIM28A0A1B0GU29 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.17□□□□□ -2.06
SMIM28A0A1B0GU29 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.17□□□□□ -2.06
SMIM28A0A1B0GU29 AC137800.2-201ENST00000574375 120 ntBASIC2.17□□□□□ -2.06
SMIM28A0A1B0GU29 NRBF2P1-201ENST00000587407 859 ntBASIC2.17□□□□□ -2.06
SMIM28A0A1B0GU29 AC040904.1-201ENST00000590850 223 ntBASIC2.17□□□□□ -2.06
SMIM28A0A1B0GU29 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.17□□□□□ -2.06
SMIM28A0A1B0GU29 DEFB131E-202ENST00000602581 683 ntBASIC2.17□□□□□ -2.06
SMIM28A0A1B0GU29 AC011939.3-201ENST00000613686 466 ntBASIC2.17□□□□□ -2.06
SMIM28A0A1B0GU29 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC2.17□□□□□ -2.06
SMIM28A0A1B0GU29 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.17□□□□□ -2.06
SMIM28A0A1B0GU29 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.17□□□□□ -2.06
SMIM28A0A1B0GU29 U6.99-201ENST00000637524 83 ntBASIC2.17□□□□□ -2.06
SMIM28A0A1B0GU29 CKAP2P1-201ENST00000555477 2049 ntBASIC2.17□□□□□ -2.06
SMIM28A0A1B0GU29 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.16□□□□□ -2.06
SMIM28A0A1B0GU29 AC005336.3-201ENST00000623833 2679 ntBASIC2.16□□□□□ -2.06
SMIM28A0A1B0GU29 RNU6-166P-201ENST00000384371 107 ntBASIC2.16□□□□□ -2.06
SMIM28A0A1B0GU29 MIR518D-201ENST00000385014 87 ntBASIC2.16□□□□□ -2.06
SMIM28A0A1B0GU29 RNU2-8P-201ENST00000410727 190 ntBASIC2.16□□□□□ -2.06
SMIM28A0A1B0GU29 AC096649.2-201ENST00000416186 393 ntBASIC2.16□□□□□ -2.06
SMIM28A0A1B0GU29 BX295541.1-201ENST00000417774 250 ntBASIC2.16□□□□□ -2.06
SMIM28A0A1B0GU29 C1DP2-201ENST00000418167 426 ntBASIC2.16□□□□□ -2.06
SMIM28A0A1B0GU29 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.16□□□□□ -2.06
SMIM28A0A1B0GU29 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.16□□□□□ -2.06
SMIM28A0A1B0GU29 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.16□□□□□ -2.06
SMIM28A0A1B0GU29 KLF3P2-201ENST00000465138 268 ntBASIC2.16□□□□□ -2.06
SMIM28A0A1B0GU29 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.16□□□□□ -2.06
SMIM28A0A1B0GU29 RNU6-581P-201ENST00000516214 105 ntBASIC2.16□□□□□ -2.06
SMIM28A0A1B0GU29 AL121821.2-201ENST00000556081 394 ntBASIC2.16□□□□□ -2.06
SMIM28A0A1B0GU29 AC012213.3-201ENST00000577199 777 ntBASIC2.16□□□□□ -2.06
SMIM28A0A1B0GU29 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
SMIM28A0A1B0GU29 MIR5089-201ENST00000580047 84 ntBASIC2.16□□□□□ -2.06
SMIM28A0A1B0GU29 RSL24D1P11-201ENST00000591045 491 ntBASIC2.16□□□□□ -2.06
SMIM28A0A1B0GU29 AL391813.1-201ENST00000603098 260 ntBASIC2.16□□□□□ -2.06
SMIM28A0A1B0GU29 AC174048.1-201ENST00000603389 144 ntBASIC2.16□□□□□ -2.06
SMIM28A0A1B0GU29 AC091152.3-201ENST00000604227 325 ntBASIC2.16□□□□□ -2.06
SMIM28A0A1B0GU29 AL022154.1-201ENST00000604698 785 ntBASIC2.16□□□□□ -2.06
SMIM28A0A1B0GU29 AL158032.1-201ENST00000605401 106 ntBASIC2.16□□□□□ -2.06
SMIM28A0A1B0GU29 MIR98-201ENST00000606724 119 ntBASIC2.16□□□□□ -2.06
SMIM28A0A1B0GU29 AC135507.1-201ENST00000607214 561 ntBASIC2.16□□□□□ -2.06
SMIM28A0A1B0GU29 AL449363.1-201ENST00000617815 186 ntBASIC2.16□□□□□ -2.06
SMIM28A0A1B0GU29 AL157786.1-207ENST00000627771 695 ntBASIC2.16□□□□□ -2.06
SMIM28A0A1B0GU29 MIR7515-201ENST00000637837 67 ntBASIC2.16□□□□□ -2.06
SMIM28A0A1B0GU29 AC241585.2-209ENST00000638217 143 ntBASIC2.16□□□□□ -2.06
SMIM28A0A1B0GU29 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
SMIM28A0A1B0GU29 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.16□□□□□ -2.06
SMIM28A0A1B0GU29 ADAM3A-203ENST00000461344 2157 ntBASIC2.16□□□□□ -2.06
SMIM28A0A1B0GU29 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.16□□□□□ -2.06
SMIM28A0A1B0GU29 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
SMIM28A0A1B0GU29 CDC27P3-201ENST00000635418 1910 ntBASIC2.15□□□□□ -2.06
SMIM28A0A1B0GU29 AL356292.1-201ENST00000283110 373 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 165.5 ms