Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 AC108479.2-201ENST00000617314 601 ntBASIC1.73□□□□□ -2.13
TRAV40A0A0B4J280 UCA1.1-201ENST00000620952 75 ntBASIC1.73□□□□□ -2.13
TRAV40A0A0B4J280 AP003122.6-201ENST00000623831 495 ntBASIC1.73□□□□□ -2.13
TRAV40A0A0B4J280 AL157786.1-207ENST00000627771 695 ntBASIC1.73□□□□□ -2.13
TRAV40A0A0B4J280 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
TRAV40A0A0B4J280 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
TRAV40A0A0B4J280 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.73□□□□□ -2.13
TRAV40A0A0B4J280 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.73□□□□□ -2.13
TRAV40A0A0B4J280 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
TRAV40A0A0B4J280 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC1.72□□□□□ -2.13
TRAV40A0A0B4J280 NACAP2-201ENST00000318548 624 ntBASIC1.72□□□□□ -2.13
TRAV40A0A0B4J280 SNORA62.1-201ENST00000364287 154 ntBASIC1.72□□□□□ -2.13
TRAV40A0A0B4J280 Y_RNA.318-201ENST00000365131 97 ntBASIC1.72□□□□□ -2.13
TRAV40A0A0B4J280 RNU6-1027P-201ENST00000383998 107 ntBASIC1.72□□□□□ -2.13
TRAV40A0A0B4J280 RNU6-1119P-201ENST00000384349 108 ntBASIC1.72□□□□□ -2.13
TRAV40A0A0B4J280 RNU6-606P-201ENST00000384721 111 ntBASIC1.72□□□□□ -2.13
TRAV40A0A0B4J280 MIR578-201ENST00000384828 96 ntBASIC1.72□□□□□ -2.13
TRAV40A0A0B4J280 SNORA48.3-201ENST00000391081 134 ntBASIC1.72□□□□□ -2.13
TRAV40A0A0B4J280 RNU6-817P-201ENST00000391083 104 ntBASIC1.72□□□□□ -2.13
TRAV40A0A0B4J280 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
TRAV40A0A0B4J280 MIR888-201ENST00000401186 77 ntBASIC1.72□□□□□ -2.13
TRAV40A0A0B4J280 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.72□□□□□ -2.13
TRAV40A0A0B4J280 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.72□□□□□ -2.13
TRAV40A0A0B4J280 AL353729.1-201ENST00000425044 720 ntBASIC1.72□□□□□ -2.13
TRAV40A0A0B4J280 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC1.72□□□□□ -2.13
TRAV40A0A0B4J280 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.72□□□□□ -2.13
TRAV40A0A0B4J280 TOMM20P4-201ENST00000427861 435 ntBASIC1.72□□□□□ -2.13
TRAV40A0A0B4J280 MED13P1-201ENST00000428342 171 ntBASIC1.72□□□□□ -2.13
TRAV40A0A0B4J280 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
TRAV40A0A0B4J280 AL451074.3-201ENST00000437709 472 ntBASIC1.72□□□□□ -2.13
TRAV40A0A0B4J280 AL121769.1-201ENST00000469473 401 ntBASIC1.72□□□□□ -2.13
TRAV40A0A0B4J280 AC107626.1-201ENST00000471084 183 ntBASIC1.72□□□□□ -2.13
TRAV40A0A0B4J280 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.72□□□□□ -2.13
TRAV40A0A0B4J280 MTCO3P9-201ENST00000506989 781 ntBASIC1.72□□□□□ -2.13
TRAV40A0A0B4J280 MTND4P2-201ENST00000507767 1203 ntBASIC1.72□□□□□ -2.13
TRAV40A0A0B4J280 AC114786.4-201ENST00000508771 728 ntBASIC1.72□□□□□ -2.13
TRAV40A0A0B4J280 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.72□□□□□ -2.13
TRAV40A0A0B4J280 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.72□□□□□ -2.13
TRAV40A0A0B4J280 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC1.72□□□□□ -2.13
TRAV40A0A0B4J280 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
TRAV40A0A0B4J280 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.72□□□□□ -2.13
TRAV40A0A0B4J280 AC011979.2-201ENST00000527568 352 ntBASIC1.72□□□□□ -2.13
TRAV40A0A0B4J280 GLYCAM1-201ENST00000546596 285 ntBASIC1.72□□□□□ -2.13
TRAV40A0A0B4J280 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.72□□□□□ -2.13
TRAV40A0A0B4J280 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.72□□□□□ -2.13
TRAV40A0A0B4J280 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.72□□□□□ -2.13
TRAV40A0A0B4J280 MIR4524B-201ENST00000581569 115 ntBASIC1.72□□□□□ -2.13
TRAV40A0A0B4J280 AL391646.1-201ENST00000603860 190 ntBASIC1.72□□□□□ -2.13
TRAV40A0A0B4J280 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.72□□□□□ -2.13
TRAV40A0A0B4J280 AC013562.2-201ENST00000611632 603 ntBASIC1.72□□□□□ -2.13
TRAV40A0A0B4J280 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.72□□□□□ -2.13
TRAV40A0A0B4J280 AL589743.7-201ENST00000612637 233 ntBASIC1.72□□□□□ -2.13
TRAV40A0A0B4J280 DUSP12P1-201ENST00000612874 516 ntBASIC1.72□□□□□ -2.13
TRAV40A0A0B4J280 AC012409.4-201ENST00000612923 249 ntBASIC1.72□□□□□ -2.13
TRAV40A0A0B4J280 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.72□□□□□ -2.13
TRAV40A0A0B4J280 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.72□□□□□ -2.13
TRAV40A0A0B4J280 AC048344.4-201ENST00000619744 527 ntBASIC1.72□□□□□ -2.13
TRAV40A0A0B4J280 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.72□□□□□ -2.13
TRAV40A0A0B4J280 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.72□□□□□ -2.13
TRAV40A0A0B4J280 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
TRAV40A0A0B4J280 MTND4P35-201ENST00000604257 1375 ntBASIC1.72□□□□□ -2.13
TRAV40A0A0B4J280 AC073343.1-201ENST00000328239 651 ntBASIC1.71□□□□□ -2.14
TRAV40A0A0B4J280 Y_RNA.41-201ENST00000362646 102 ntBASIC1.71□□□□□ -2.14
TRAV40A0A0B4J280 SNORD56.5-201ENST00000364281 72 ntBASIC1.71□□□□□ -2.14
TRAV40A0A0B4J280 SNORD115-7-201ENST00000365306 82 ntBASIC1.71□□□□□ -2.14
TRAV40A0A0B4J280 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
TRAV40A0A0B4J280 Y_RNA.436-201ENST00000384097 102 ntBASIC1.71□□□□□ -2.14
TRAV40A0A0B4J280 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.71□□□□□ -2.14
TRAV40A0A0B4J280 RNU6-1025P-201ENST00000410629 104 ntBASIC1.71□□□□□ -2.14
TRAV40A0A0B4J280 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC1.71□□□□□ -2.14
TRAV40A0A0B4J280 EEF1A1P40-201ENST00000412883 573 ntBASIC1.71□□□□□ -2.14
TRAV40A0A0B4J280 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.71□□□□□ -2.14
TRAV40A0A0B4J280 AL109913.1-201ENST00000421173 514 ntBASIC1.71□□□□□ -2.14
TRAV40A0A0B4J280 AL353193.1-201ENST00000421444 268 ntBASIC1.71□□□□□ -2.14
TRAV40A0A0B4J280 AL160275.3-201ENST00000423876 471 ntBASIC1.71□□□□□ -2.14
TRAV40A0A0B4J280 AC098831.1-201ENST00000440661 216 ntBASIC1.71□□□□□ -2.14
TRAV40A0A0B4J280 UBBP3-201ENST00000445497 241 ntBASIC1.71□□□□□ -2.14
TRAV40A0A0B4J280 DPPA3P1-201ENST00000448050 469 ntBASIC1.71□□□□□ -2.14
TRAV40A0A0B4J280 AL118520.1-201ENST00000450770 291 ntBASIC1.71□□□□□ -2.14
TRAV40A0A0B4J280 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.71□□□□□ -2.14
TRAV40A0A0B4J280 AC233279.1-201ENST00000455300 423 ntBASIC1.71□□□□□ -2.14
TRAV40A0A0B4J280 SNRPFP4-201ENST00000456366 242 ntBASIC1.71□□□□□ -2.14
TRAV40A0A0B4J280 RPS29P15-201ENST00000458329 171 ntBASIC1.71□□□□□ -2.14
TRAV40A0A0B4J280 TRBV1-201ENST00000476502 284 ntBASIC1.71□□□□□ -2.14
TRAV40A0A0B4J280 RPL31P41-201ENST00000477967 372 ntBASIC1.71□□□□□ -2.14
TRAV40A0A0B4J280 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.71□□□□□ -2.14
TRAV40A0A0B4J280 AC116562.3-201ENST00000506136 177 ntBASIC1.71□□□□□ -2.14
TRAV40A0A0B4J280 SEM1P1-201ENST00000506694 209 ntBASIC1.71□□□□□ -2.14
TRAV40A0A0B4J280 AC098591.2-201ENST00000510152 315 ntBASIC1.71□□□□□ -2.14
TRAV40A0A0B4J280 SNORA31.6-201ENST00000516241 130 ntBASIC1.71□□□□□ -2.14
TRAV40A0A0B4J280 RNU6-572P-201ENST00000516724 80 ntBASIC1.71□□□□□ -2.14
TRAV40A0A0B4J280 RNU6-677P-201ENST00000516914 101 ntBASIC1.71□□□□□ -2.14
TRAV40A0A0B4J280 RNU6-1183P-201ENST00000517054 60 ntBASIC1.71□□□□□ -2.14
TRAV40A0A0B4J280 SNORA31.19-201ENST00000517079 126 ntBASIC1.71□□□□□ -2.14
TRAV40A0A0B4J280 AC068587.5-201ENST00000528506 175 ntBASIC1.71□□□□□ -2.14
TRAV40A0A0B4J280 OR5AL2P-201ENST00000532185 920 ntBASIC1.71□□□□□ -2.14
TRAV40A0A0B4J280 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.71□□□□□ -2.14
TRAV40A0A0B4J280 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.71□□□□□ -2.14
TRAV40A0A0B4J280 AC103987.3-201ENST00000582071 292 ntBASIC1.71□□□□□ -2.14
TRAV40A0A0B4J280 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms