Protein–RNA interactions for Protein: A0A087X179

TBC1D3E, TBC1 domain family member 3E, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3EA0A087X179 SCARNA4.1-201ENST00000628597 123 ntBASIC3.19□□□□□ -1.9
TBC1D3EA0A087X179 AL133216.2-202ENST00000634512 349 ntBASIC3.19□□□□□ -1.9
TBC1D3EA0A087X179 MTND5P7-201ENST00000413558 1798 ntBASIC3.19□□□□□ -1.9
TBC1D3EA0A087X179 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
TBC1D3EA0A087X179 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TBC1D3EA0A087X179 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.19□□□□□ -1.9
TBC1D3EA0A087X179 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TBC1D3EA0A087X179 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.19□□□□□ -1.9
TBC1D3EA0A087X179 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.18□□□□□ -1.9
TBC1D3EA0A087X179 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.18□□□□□ -1.9
TBC1D3EA0A087X179 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TBC1D3EA0A087X179 AC138393.1-203ENST00000327086 343 ntBASIC3.18□□□□□ -1.9
TBC1D3EA0A087X179 Y_RNA.301-201ENST00000364990 103 ntBASIC3.18□□□□□ -1.9
TBC1D3EA0A087X179 U3.26-201ENST00000391236 204 ntBASIC3.18□□□□□ -1.9
TBC1D3EA0A087X179 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.18□□□□□ -1.9
TBC1D3EA0A087X179 MIR450B-201ENST00000401182 78 ntBASIC3.18□□□□□ -1.9
TBC1D3EA0A087X179 RPL5P18-201ENST00000406671 891 ntBASIC3.18□□□□□ -1.9
TBC1D3EA0A087X179 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.18□□□□□ -1.9
TBC1D3EA0A087X179 RN7SKP32-201ENST00000410167 303 ntBASIC3.18□□□□□ -1.9
TBC1D3EA0A087X179 RNA5SP31-201ENST00000411144 127 ntBASIC3.18□□□□□ -1.9
TBC1D3EA0A087X179 BPY2DP-201ENST00000422208 265 ntBASIC3.18□□□□□ -1.9
TBC1D3EA0A087X179 COTL1P1-201ENST00000422309 375 ntBASIC3.18□□□□□ -1.9
TBC1D3EA0A087X179 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.18□□□□□ -1.9
TBC1D3EA0A087X179 HMGN2P20-201ENST00000437531 273 ntBASIC3.18□□□□□ -1.9
TBC1D3EA0A087X179 AC098831.1-201ENST00000440661 216 ntBASIC3.18□□□□□ -1.9
TBC1D3EA0A087X179 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.18□□□□□ -1.9
TBC1D3EA0A087X179 HMGN2P13-201ENST00000476476 274 ntBASIC3.18□□□□□ -1.9
TBC1D3EA0A087X179 AL049873.1-201ENST00000480540 376 ntBASIC3.18□□□□□ -1.9
TBC1D3EA0A087X179 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.18□□□□□ -1.9
TBC1D3EA0A087X179 AC079140.5-201ENST00000507882 310 ntBASIC3.18□□□□□ -1.9
TBC1D3EA0A087X179 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.18□□□□□ -1.9
TBC1D3EA0A087X179 NDUFB9P3-201ENST00000521269 501 ntBASIC3.18□□□□□ -1.9
TBC1D3EA0A087X179 RNU6-323P-201ENST00000521915 107 ntBASIC3.18□□□□□ -1.9
TBC1D3EA0A087X179 AP000889.1-201ENST00000530968 660 ntBASIC3.18□□□□□ -1.9
TBC1D3EA0A087X179 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.18□□□□□ -1.9
TBC1D3EA0A087X179 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.18□□□□□ -1.9
TBC1D3EA0A087X179 MIR3672-201ENST00000584290 82 ntBASIC3.18□□□□□ -1.9
TBC1D3EA0A087X179 AC123912.5-201ENST00000605470 343 ntBASIC3.18□□□□□ -1.9
TBC1D3EA0A087X179 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.18□□□□□ -1.9
TBC1D3EA0A087X179 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.18□□□□□ -1.9
TBC1D3EA0A087X179 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.18□□□□□ -1.9
TBC1D3EA0A087X179 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TBC1D3EA0A087X179 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TBC1D3EA0A087X179 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
TBC1D3EA0A087X179 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.17□□□□□ -1.9
TBC1D3EA0A087X179 SNORD15B-201ENST00000384714 146 ntBASIC3.17□□□□□ -1.9
TBC1D3EA0A087X179 MIR518D-201ENST00000385014 87 ntBASIC3.17□□□□□ -1.9
TBC1D3EA0A087X179 VN1R36P-201ENST00000414936 291 ntBASIC3.17□□□□□ -1.9
TBC1D3EA0A087X179 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.17□□□□□ -1.9
TBC1D3EA0A087X179 HMGB1P9-201ENST00000429856 646 ntBASIC3.17□□□□□ -1.9
TBC1D3EA0A087X179 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.17□□□□□ -1.9
TBC1D3EA0A087X179 SNRPEP8-201ENST00000442866 260 ntBASIC3.17□□□□□ -1.9
TBC1D3EA0A087X179 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.17□□□□□ -1.9
TBC1D3EA0A087X179 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.17□□□□□ -1.9
TBC1D3EA0A087X179 AL031183.1-201ENST00000457667 207 ntBASIC3.17□□□□□ -1.9
TBC1D3EA0A087X179 AC021205.2-201ENST00000480069 347 ntBASIC3.17□□□□□ -1.9
TBC1D3EA0A087X179 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.17□□□□□ -1.9
TBC1D3EA0A087X179 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.17□□□□□ -1.9
TBC1D3EA0A087X179 RNU6-256P-201ENST00000516747 97 ntBASIC3.17□□□□□ -1.9
TBC1D3EA0A087X179 RNU6-1088P-201ENST00000516850 104 ntBASIC3.17□□□□□ -1.9
TBC1D3EA0A087X179 AP000889.2-201ENST00000532684 490 ntBASIC3.17□□□□□ -1.9
TBC1D3EA0A087X179 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.17□□□□□ -1.9
TBC1D3EA0A087X179 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.17□□□□□ -1.9
TBC1D3EA0A087X179 LINC00933-203ENST00000559812 219 ntBASIC3.17□□□□□ -1.9
TBC1D3EA0A087X179 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.17□□□□□ -1.9
TBC1D3EA0A087X179 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.17□□□□□ -1.9
TBC1D3EA0A087X179 LARP7P3-201ENST00000579888 337 ntBASIC3.17□□□□□ -1.9
TBC1D3EA0A087X179 AC005498.1-201ENST00000592125 465 ntBASIC3.17□□□□□ -1.9
TBC1D3EA0A087X179 NUTF2P8-201ENST00000604593 363 ntBASIC3.17□□□□□ -1.9
TBC1D3EA0A087X179 uc_338.25-201ENST00000613756 156 ntBASIC3.17□□□□□ -1.9
TBC1D3EA0A087X179 Y_RNA.804-201ENST00000615262 101 ntBASIC3.17□□□□□ -1.9
TBC1D3EA0A087X179 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TBC1D3EA0A087X179 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TBC1D3EA0A087X179 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
TBC1D3EA0A087X179 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.17□□□□□ -1.9
TBC1D3EA0A087X179 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TBC1D3EA0A087X179 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.16□□□□□ -1.9
TBC1D3EA0A087X179 MAPK10-322ENST00000641485 4530 ntBASIC3.16□□□□□ -1.9
TBC1D3EA0A087X179 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.16□□□□□ -1.9
TBC1D3EA0A087X179 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
TBC1D3EA0A087X179 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.16□□□□□ -1.9
TBC1D3EA0A087X179 RNU1-75P-201ENST00000347264 129 ntBASIC3.16□□□□□ -1.9
TBC1D3EA0A087X179 RNU1-140P-201ENST00000365040 165 ntBASIC3.16□□□□□ -1.9
TBC1D3EA0A087X179 AP002088.1-201ENST00000382740 395 ntBASIC3.16□□□□□ -1.9
TBC1D3EA0A087X179 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
TBC1D3EA0A087X179 RNU6-1009P-201ENST00000390996 107 ntBASIC3.16□□□□□ -1.9
TBC1D3EA0A087X179 AL356432.1-201ENST00000405809 419 ntBASIC3.16□□□□□ -1.9
TBC1D3EA0A087X179 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.16□□□□□ -1.9
TBC1D3EA0A087X179 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.16□□□□□ -1.9
TBC1D3EA0A087X179 AC016831.2-201ENST00000417179 352 ntBASIC3.16□□□□□ -1.9
TBC1D3EA0A087X179 HIGD1AP11-201ENST00000438361 280 ntBASIC3.16□□□□□ -1.9
TBC1D3EA0A087X179 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.16□□□□□ -1.9
TBC1D3EA0A087X179 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.16□□□□□ -1.9
TBC1D3EA0A087X179 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.16□□□□□ -1.9
TBC1D3EA0A087X179 snoU109.2-201ENST00000459316 135 ntBASIC3.16□□□□□ -1.9
TBC1D3EA0A087X179 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.16□□□□□ -1.9
TBC1D3EA0A087X179 RPS4XP22-201ENST00000480755 780 ntBASIC3.16□□□□□ -1.9
TBC1D3EA0A087X179 AC026801.1-201ENST00000497178 464 ntBASIC3.16□□□□□ -1.9
TBC1D3EA0A087X179 TRBVA-201ENST00000498804 316 ntBASIC3.16□□□□□ -1.9
TBC1D3EA0A087X179 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 134.6 ms