Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
AP4B1Q9Y6B7 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.22□□□□□ -2.05
AP4B1Q9Y6B7 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.22□□□□□ -2.05
AP4B1Q9Y6B7 IPO7P1-201ENST00000442031 636 ntBASIC2.22□□□□□ -2.05
AP4B1Q9Y6B7 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.22□□□□□ -2.05
AP4B1Q9Y6B7 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.22□□□□□ -2.05
AP4B1Q9Y6B7 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
AP4B1Q9Y6B7 RPL36AP48-201ENST00000485521 314 ntBASIC2.22□□□□□ -2.05
AP4B1Q9Y6B7 AC011005.2-201ENST00000487324 359 ntBASIC2.22□□□□□ -2.05
AP4B1Q9Y6B7 AC079804.2-201ENST00000490376 200 ntBASIC2.22□□□□□ -2.05
AP4B1Q9Y6B7 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.22□□□□□ -2.05
AP4B1Q9Y6B7 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.22□□□□□ -2.05
AP4B1Q9Y6B7 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.22□□□□□ -2.05
AP4B1Q9Y6B7 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.22□□□□□ -2.05
AP4B1Q9Y6B7 SNORA25.11-201ENST00000515935 105 ntBASIC2.22□□□□□ -2.05
AP4B1Q9Y6B7 RNA5SP24-201ENST00000516478 95 ntBASIC2.22□□□□□ -2.05
AP4B1Q9Y6B7 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.22□□□□□ -2.05
AP4B1Q9Y6B7 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.22□□□□□ -2.05
AP4B1Q9Y6B7 AC121758.2-201ENST00000553271 193 ntBASIC2.22□□□□□ -2.05
AP4B1Q9Y6B7 AC012213.3-201ENST00000577199 777 ntBASIC2.22□□□□□ -2.05
AP4B1Q9Y6B7 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.22□□□□□ -2.05
AP4B1Q9Y6B7 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.22□□□□□ -2.05
AP4B1Q9Y6B7 AC025165.5-201ENST00000602802 578 ntBASIC2.22□□□□□ -2.05
AP4B1Q9Y6B7 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.22□□□□□ -2.05
AP4B1Q9Y6B7 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.22□□□□□ -2.05
AP4B1Q9Y6B7 U4atac.1-201ENST00000618345 95 ntBASIC2.22□□□□□ -2.05
AP4B1Q9Y6B7 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
AP4B1Q9Y6B7 AC025034.2-201ENST00000623264 286 ntBASIC2.22□□□□□ -2.05
AP4B1Q9Y6B7 AC091931.1-201ENST00000623488 728 ntBASIC2.22□□□□□ -2.05
AP4B1Q9Y6B7 AP003400.5-201ENST00000624827 617 ntBASIC2.22□□□□□ -2.05
AP4B1Q9Y6B7 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.22□□□□□ -2.05
AP4B1Q9Y6B7 AC069528.2-201ENST00000624849 1991 ntBASIC2.21□□□□□ -2.05
AP4B1Q9Y6B7 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
AP4B1Q9Y6B7 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
AP4B1Q9Y6B7 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.21□□□□□ -2.06
AP4B1Q9Y6B7 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
AP4B1Q9Y6B7 SNORD114-30-201ENST00000364448 72 ntBASIC2.21□□□□□ -2.06
AP4B1Q9Y6B7 RNU6-301P-201ENST00000384277 107 ntBASIC2.21□□□□□ -2.06
AP4B1Q9Y6B7 HMGN1P14-201ENST00000412459 517 ntBASIC2.21□□□□□ -2.06
AP4B1Q9Y6B7 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.21□□□□□ -2.06
AP4B1Q9Y6B7 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.21□□□□□ -2.06
AP4B1Q9Y6B7 AL160275.3-201ENST00000423876 471 ntBASIC2.21□□□□□ -2.06
AP4B1Q9Y6B7 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.21□□□□□ -2.06
AP4B1Q9Y6B7 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.21□□□□□ -2.06
AP4B1Q9Y6B7 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.21□□□□□ -2.06
AP4B1Q9Y6B7 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.21□□□□□ -2.06
AP4B1Q9Y6B7 RPS6P15-201ENST00000431996 751 ntBASIC2.21□□□□□ -2.06
AP4B1Q9Y6B7 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.21□□□□□ -2.06
AP4B1Q9Y6B7 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC2.21□□□□□ -2.06
AP4B1Q9Y6B7 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
AP4B1Q9Y6B7 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.21□□□□□ -2.06
AP4B1Q9Y6B7 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.21□□□□□ -2.06
AP4B1Q9Y6B7 AC022493.1-201ENST00000492984 337 ntBASIC2.21□□□□□ -2.06
AP4B1Q9Y6B7 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.21□□□□□ -2.06
AP4B1Q9Y6B7 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.21□□□□□ -2.06
AP4B1Q9Y6B7 Vault.3-201ENST00000516676 95 ntBASIC2.21□□□□□ -2.06
AP4B1Q9Y6B7 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC2.21□□□□□ -2.06
AP4B1Q9Y6B7 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.21□□□□□ -2.06
AP4B1Q9Y6B7 AC025678.1-201ENST00000567861 338 ntBASIC2.21□□□□□ -2.06
AP4B1Q9Y6B7 MIR5694-201ENST00000581190 76 ntBASIC2.21□□□□□ -2.06
AP4B1Q9Y6B7 MIR3682-201ENST00000581338 84 ntBASIC2.21□□□□□ -2.06
AP4B1Q9Y6B7 MIR4298-201ENST00000584380 73 ntBASIC2.21□□□□□ -2.06
AP4B1Q9Y6B7 DEFB131E-202ENST00000602581 683 ntBASIC2.21□□□□□ -2.06
AP4B1Q9Y6B7 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.21□□□□□ -2.06
AP4B1Q9Y6B7 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.21□□□□□ -2.06
AP4B1Q9Y6B7 AC024581.2-201ENST00000619986 252 ntBASIC2.21□□□□□ -2.06
AP4B1Q9Y6B7 AC138627.2-201ENST00000624202 601 ntBASIC2.21□□□□□ -2.06
AP4B1Q9Y6B7 AC120349.3-201ENST00000624377 529 ntBASIC2.21□□□□□ -2.06
AP4B1Q9Y6B7 AC016717.2-201ENST00000609089 5141 ntBASIC2.21□□□□□ -2.06
AP4B1Q9Y6B7 Z75746.1-201ENST00000440243 2080 ntBASIC2.21□□□□□ -2.06
AP4B1Q9Y6B7 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
AP4B1Q9Y6B7 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.2□□□□□ -2.06
AP4B1Q9Y6B7 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.2□□□□□ -2.06
AP4B1Q9Y6B7 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.2□□□□□ -2.06
AP4B1Q9Y6B7 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
AP4B1Q9Y6B7 MIR449A-201ENST00000362113 91 ntBASIC2.2□□□□□ -2.06
AP4B1Q9Y6B7 RNU6-169P-201ENST00000365336 107 ntBASIC2.2□□□□□ -2.06
AP4B1Q9Y6B7 RNA5SP37-201ENST00000365420 130 ntBASIC2.2□□□□□ -2.06
AP4B1Q9Y6B7 OR5H15-201ENST00000383696 930 ntBASIC2.2□□□□□ -2.06
AP4B1Q9Y6B7 SNORA40.3-201ENST00000390964 122 ntBASIC2.2□□□□□ -2.06
AP4B1Q9Y6B7 SNORA26.8-201ENST00000391306 124 ntBASIC2.2□□□□□ -2.06
AP4B1Q9Y6B7 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
AP4B1Q9Y6B7 AL133475.1-201ENST00000404414 305 ntBASIC2.2□□□□□ -2.06
AP4B1Q9Y6B7 AL355497.1-201ENST00000406262 551 ntBASIC2.2□□□□□ -2.06
AP4B1Q9Y6B7 Y_RNA.623-201ENST00000411128 95 ntBASIC2.2□□□□□ -2.06
AP4B1Q9Y6B7 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.2□□□□□ -2.06
AP4B1Q9Y6B7 AC107081.1-201ENST00000414975 361 ntBASIC2.2□□□□□ -2.06
AP4B1Q9Y6B7 AC016831.2-201ENST00000417179 352 ntBASIC2.2□□□□□ -2.06
AP4B1Q9Y6B7 AL365338.1-201ENST00000422282 858 ntBASIC2.2□□□□□ -2.06
AP4B1Q9Y6B7 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.2□□□□□ -2.06
AP4B1Q9Y6B7 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
AP4B1Q9Y6B7 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.2□□□□□ -2.06
AP4B1Q9Y6B7 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
AP4B1Q9Y6B7 AC090255.1-201ENST00000495779 349 ntBASIC2.2□□□□□ -2.06
AP4B1Q9Y6B7 AF213884.2-201ENST00000510417 903 ntBASIC2.2□□□□□ -2.06
AP4B1Q9Y6B7 AC112206.3-201ENST00000514578 389 ntBASIC2.2□□□□□ -2.06
AP4B1Q9Y6B7 SMURF2P1-201ENST00000514992 481 ntBASIC2.2□□□□□ -2.06
AP4B1Q9Y6B7 SCARNA24.1-201ENST00000516465 137 ntBASIC2.2□□□□□ -2.06
AP4B1Q9Y6B7 AC060788.1-201ENST00000521318 469 ntBASIC2.2□□□□□ -2.06
AP4B1Q9Y6B7 DUXAP5-201ENST00000529668 529 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms