Protein–RNA interactions for Protein: Q9Y5T5

USP16, Ubiquitin carboxyl-terminal hydrolase 16, humanhuman

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP16Q9Y5T5 FABP5P15-201ENST00000453566 214 ntBASIC2.35□□□□□ -2.03
USP16Q9Y5T5 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.35□□□□□ -2.03
USP16Q9Y5T5 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC2.35□□□□□ -2.03
USP16Q9Y5T5 SNORD13-201ENST00000459299 104 ntBASIC2.35□□□□□ -2.03
USP16Q9Y5T5 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.35□□□□□ -2.03
USP16Q9Y5T5 AC107393.1-201ENST00000512403 346 ntBASIC2.35□□□□□ -2.03
USP16Q9Y5T5 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.35□□□□□ -2.03
USP16Q9Y5T5 FABP5P5-201ENST00000515537 406 ntBASIC2.35□□□□□ -2.03
USP16Q9Y5T5 RNU6-250P-201ENST00000516958 103 ntBASIC2.35□□□□□ -2.03
USP16Q9Y5T5 RNA5SP471-201ENST00000516971 106 ntBASIC2.35□□□□□ -2.03
USP16Q9Y5T5 RNA5SP165-201ENST00000517142 115 ntBASIC2.35□□□□□ -2.03
USP16Q9Y5T5 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.35□□□□□ -2.03
USP16Q9Y5T5 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.35□□□□□ -2.03
USP16Q9Y5T5 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.35□□□□□ -2.03
USP16Q9Y5T5 MIR3616-201ENST00000584070 92 ntBASIC2.35□□□□□ -2.03
USP16Q9Y5T5 AP000860.1-201ENST00000605250 559 ntBASIC2.35□□□□□ -2.03
USP16Q9Y5T5 MIR6840-201ENST00000611937 71 ntBASIC2.35□□□□□ -2.03
USP16Q9Y5T5 AC091834.1-201ENST00000614543 472 ntBASIC2.35□□□□□ -2.03
USP16Q9Y5T5 AC104010.1-201ENST00000616889 150 ntBASIC2.35□□□□□ -2.03
USP16Q9Y5T5 AL589994.2-201ENST00000621124 579 ntBASIC2.35□□□□□ -2.03
USP16Q9Y5T5 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
USP16Q9Y5T5 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.34□□□□□ -2.03
USP16Q9Y5T5 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
USP16Q9Y5T5 Y_RNA.169-201ENST00000363745 96 ntBASIC2.34□□□□□ -2.03
USP16Q9Y5T5 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
USP16Q9Y5T5 AC096649.2-201ENST00000416186 393 ntBASIC2.34□□□□□ -2.03
USP16Q9Y5T5 MTND2P18-201ENST00000419962 1030 ntBASIC2.34□□□□□ -2.03
USP16Q9Y5T5 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.34□□□□□ -2.03
USP16Q9Y5T5 AL445687.1-201ENST00000439946 251 ntBASIC2.34□□□□□ -2.03
USP16Q9Y5T5 EPS15P1-201ENST00000448836 336 ntBASIC2.34□□□□□ -2.03
USP16Q9Y5T5 CECR9-201ENST00000453421 199 ntBASIC2.34□□□□□ -2.03
USP16Q9Y5T5 RN7SKP210-201ENST00000459176 261 ntBASIC2.34□□□□□ -2.03
USP16Q9Y5T5 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.34□□□□□ -2.03
USP16Q9Y5T5 AC010486.2-201ENST00000505572 483 ntBASIC2.34□□□□□ -2.03
USP16Q9Y5T5 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.34□□□□□ -2.03
USP16Q9Y5T5 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.34□□□□□ -2.03
USP16Q9Y5T5 GNAI2P1-201ENST00000541815 315 ntBASIC2.34□□□□□ -2.03
USP16Q9Y5T5 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.34□□□□□ -2.03
USP16Q9Y5T5 MIR3682-201ENST00000581338 84 ntBASIC2.34□□□□□ -2.03
USP16Q9Y5T5 MIR3118-1-201ENST00000581787 76 ntBASIC2.34□□□□□ -2.03
USP16Q9Y5T5 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.34□□□□□ -2.03
USP16Q9Y5T5 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.34□□□□□ -2.03
USP16Q9Y5T5 AC174048.1-201ENST00000603389 144 ntBASIC2.34□□□□□ -2.03
USP16Q9Y5T5 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.34□□□□□ -2.03
USP16Q9Y5T5 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.34□□□□□ -2.03
USP16Q9Y5T5 AC011939.3-201ENST00000613686 466 ntBASIC2.34□□□□□ -2.03
USP16Q9Y5T5 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.34□□□□□ -2.03
USP16Q9Y5T5 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.34□□□□□ -2.04
USP16Q9Y5T5 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.34□□□□□ -2.04
USP16Q9Y5T5 RNU6-960P-201ENST00000364056 120 ntBASIC2.33□□□□□ -2.04
USP16Q9Y5T5 RNU5E-6P-201ENST00000365574 115 ntBASIC2.33□□□□□ -2.04
USP16Q9Y5T5 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
USP16Q9Y5T5 RNU6-190P-201ENST00000384154 102 ntBASIC2.33□□□□□ -2.04
USP16Q9Y5T5 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
USP16Q9Y5T5 AL356583.2-201ENST00000426536 280 ntBASIC2.33□□□□□ -2.04
USP16Q9Y5T5 SRIP2-201ENST00000428470 166 ntBASIC2.33□□□□□ -2.04
USP16Q9Y5T5 AC098831.1-201ENST00000440661 216 ntBASIC2.33□□□□□ -2.04
USP16Q9Y5T5 MTND4P25-201ENST00000441039 533 ntBASIC2.33□□□□□ -2.04
USP16Q9Y5T5 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.33□□□□□ -2.04
USP16Q9Y5T5 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2.33□□□□□ -2.04
USP16Q9Y5T5 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.33□□□□□ -2.04
USP16Q9Y5T5 RPL39P36-201ENST00000490784 156 ntBASIC2.33□□□□□ -2.04
USP16Q9Y5T5 Y_RNA.672-201ENST00000516289 104 ntBASIC2.33□□□□□ -2.04
USP16Q9Y5T5 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.33□□□□□ -2.04
USP16Q9Y5T5 AC026407.1-201ENST00000518369 204 ntBASIC2.33□□□□□ -2.04
USP16Q9Y5T5 AC025755.1-201ENST00000521306 278 ntBASIC2.33□□□□□ -2.04
USP16Q9Y5T5 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.33□□□□□ -2.04
USP16Q9Y5T5 ARL2BPP2-201ENST00000550907 489 ntBASIC2.33□□□□□ -2.04
USP16Q9Y5T5 RPL21P5-201ENST00000554662 472 ntBASIC2.33□□□□□ -2.04
USP16Q9Y5T5 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC2.33□□□□□ -2.04
USP16Q9Y5T5 MIR3915-201ENST00000578518 97 ntBASIC2.33□□□□□ -2.04
USP16Q9Y5T5 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.33□□□□□ -2.04
USP16Q9Y5T5 BNIP3P8-201ENST00000597863 560 ntBASIC2.33□□□□□ -2.04
USP16Q9Y5T5 BNIP3P9-201ENST00000603714 553 ntBASIC2.33□□□□□ -2.04
USP16Q9Y5T5 AL358072.1-201ENST00000604156 575 ntBASIC2.33□□□□□ -2.04
USP16Q9Y5T5 AL365204.3-201ENST00000612448 685 ntBASIC2.33□□□□□ -2.04
USP16Q9Y5T5 AC120349.3-201ENST00000624377 529 ntBASIC2.33□□□□□ -2.04
USP16Q9Y5T5 AC007494.3-201ENST00000624660 743 ntBASIC2.33□□□□□ -2.04
USP16Q9Y5T5 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
USP16Q9Y5T5 AC110491.1-201ENST00000562191 2010 ntBASIC2.33□□□□□ -2.04
USP16Q9Y5T5 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
USP16Q9Y5T5 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
USP16Q9Y5T5 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
USP16Q9Y5T5 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
USP16Q9Y5T5 AC073343.1-201ENST00000328239 651 ntBASIC2.32□□□□□ -2.04
USP16Q9Y5T5 RNU6-461P-201ENST00000364195 107 ntBASIC2.32□□□□□ -2.04
USP16Q9Y5T5 RNU6-512P-201ENST00000364438 103 ntBASIC2.32□□□□□ -2.04
USP16Q9Y5T5 SNORA6-201ENST00000384033 151 ntBASIC2.32□□□□□ -2.04
USP16Q9Y5T5 RNU6-1072P-201ENST00000384703 107 ntBASIC2.32□□□□□ -2.04
USP16Q9Y5T5 RNU6-443P-201ENST00000384780 107 ntBASIC2.32□□□□□ -2.04
USP16Q9Y5T5 MIR301A-201ENST00000385261 86 ntBASIC2.32□□□□□ -2.04
USP16Q9Y5T5 RNU2-36P-201ENST00000410361 191 ntBASIC2.32□□□□□ -2.04
USP16Q9Y5T5 Y_RNA.595-201ENST00000410403 105 ntBASIC2.32□□□□□ -2.04
USP16Q9Y5T5 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.32□□□□□ -2.04
USP16Q9Y5T5 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.32□□□□□ -2.04
USP16Q9Y5T5 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.32□□□□□ -2.04
USP16Q9Y5T5 MTATP6P7-201ENST00000453315 681 ntBASIC2.32□□□□□ -2.04
USP16Q9Y5T5 MTND1P3-201ENST00000484956 952 ntBASIC2.32□□□□□ -2.04
USP16Q9Y5T5 RPS27AP10-201ENST00000496103 208 ntBASIC2.32□□□□□ -2.04
USP16Q9Y5T5 AC010587.1-201ENST00000505809 469 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms