Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AL670379.9-201ENST00000605428 253 ntBASIC3.83□□□□□ -1.8
COL4A3BPQ9Y5P4 U7.8-201ENST00000619968 63 ntBASIC3.83□□□□□ -1.8
COL4A3BPQ9Y5P4 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.83□□□□□ -1.8
COL4A3BPQ9Y5P4 MTND5P1-201ENST00000445440 1375 ntBASIC3.83□□□□□ -1.8
COL4A3BPQ9Y5P4 AC032011.1-201ENST00000611703 1549 ntBASIC3.83□□□□□ -1.8
COL4A3BPQ9Y5P4 AC058791.1-201ENST00000608412 3198 ntBASIC3.83□□□□□ -1.8
COL4A3BPQ9Y5P4 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.83□□□□□ -1.8
COL4A3BPQ9Y5P4 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
COL4A3BPQ9Y5P4 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
COL4A3BPQ9Y5P4 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
COL4A3BPQ9Y5P4 RNU6-942P-201ENST00000363002 107 ntBASIC3.82□□□□□ -1.8
COL4A3BPQ9Y5P4 Y_RNA.160-201ENST00000363677 92 ntBASIC3.82□□□□□ -1.8
COL4A3BPQ9Y5P4 Y_RNA.333-201ENST00000365274 102 ntBASIC3.82□□□□□ -1.8
COL4A3BPQ9Y5P4 RNU6-128P-201ENST00000383976 107 ntBASIC3.82□□□□□ -1.8
COL4A3BPQ9Y5P4 RNU6-214P-201ENST00000384130 107 ntBASIC3.82□□□□□ -1.8
COL4A3BPQ9Y5P4 RNU6-1013P-201ENST00000384180 107 ntBASIC3.82□□□□□ -1.8
COL4A3BPQ9Y5P4 MT-TL1-201ENST00000386347 75 ntBASIC3.82□□□□□ -1.8
COL4A3BPQ9Y5P4 MIR450B-201ENST00000401182 78 ntBASIC3.82□□□□□ -1.8
COL4A3BPQ9Y5P4 AL122016.1-201ENST00000403365 367 ntBASIC3.82□□□□□ -1.8
COL4A3BPQ9Y5P4 SNORD56-201ENST00000413522 71 ntBASIC3.82□□□□□ -1.8
COL4A3BPQ9Y5P4 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.82□□□□□ -1.8
COL4A3BPQ9Y5P4 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.82□□□□□ -1.8
COL4A3BPQ9Y5P4 AC005019.1-201ENST00000436455 431 ntBASIC3.82□□□□□ -1.8
COL4A3BPQ9Y5P4 AL359672.1-201ENST00000442302 409 ntBASIC3.82□□□□□ -1.8
COL4A3BPQ9Y5P4 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.82□□□□□ -1.8
COL4A3BPQ9Y5P4 RPL23AP67-201ENST00000465341 474 ntBASIC3.82□□□□□ -1.8
COL4A3BPQ9Y5P4 RPL27AP5-201ENST00000469428 449 ntBASIC3.82□□□□□ -1.8
COL4A3BPQ9Y5P4 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.82□□□□□ -1.8
COL4A3BPQ9Y5P4 MED28P2-201ENST00000475771 317 ntBASIC3.82□□□□□ -1.8
COL4A3BPQ9Y5P4 RPL31P41-201ENST00000477967 372 ntBASIC3.82□□□□□ -1.8
COL4A3BPQ9Y5P4 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.82□□□□□ -1.8
COL4A3BPQ9Y5P4 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.82□□□□□ -1.8
COL4A3BPQ9Y5P4 AC010186.2-204ENST00000537668 439 ntBASIC3.82□□□□□ -1.8
COL4A3BPQ9Y5P4 CR383656.8-201ENST00000549046 145 ntBASIC3.82□□□□□ -1.8
COL4A3BPQ9Y5P4 AC011611.1-201ENST00000552179 197 ntBASIC3.82□□□□□ -1.8
COL4A3BPQ9Y5P4 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.82□□□□□ -1.8
COL4A3BPQ9Y5P4 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.82□□□□□ -1.8
COL4A3BPQ9Y5P4 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.82□□□□□ -1.8
COL4A3BPQ9Y5P4 RMST_8.1-201ENST00000610287 165 ntBASIC3.82□□□□□ -1.8
COL4A3BPQ9Y5P4 AC096577.2-201ENST00000611455 153 ntBASIC3.82□□□□□ -1.8
COL4A3BPQ9Y5P4 AC010378.1-201ENST00000619270 362 ntBASIC3.82□□□□□ -1.8
COL4A3BPQ9Y5P4 DUXAP9-208ENST00000622815 614 ntBASIC3.82□□□□□ -1.8
COL4A3BPQ9Y5P4 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.82□□□□□ -1.8
COL4A3BPQ9Y5P4 HAUS6P2-201ENST00000433254 2404 ntBASIC3.82□□□□□ -1.8
COL4A3BPQ9Y5P4 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
COL4A3BPQ9Y5P4 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
COL4A3BPQ9Y5P4 AL513302.2-201ENST00000562313 1842 ntBASIC3.81□□□□□ -1.8
COL4A3BPQ9Y5P4 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
COL4A3BPQ9Y5P4 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.81□□□□□ -1.8
COL4A3BPQ9Y5P4 RNA5SP267-201ENST00000364893 126 ntBASIC3.81□□□□□ -1.8
COL4A3BPQ9Y5P4 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
COL4A3BPQ9Y5P4 MIR1289-1-201ENST00000408836 144 ntBASIC3.81□□□□□ -1.8
COL4A3BPQ9Y5P4 AC009237.5-201ENST00000414271 501 ntBASIC3.81□□□□□ -1.8
COL4A3BPQ9Y5P4 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.81□□□□□ -1.8
COL4A3BPQ9Y5P4 AC093151.1-201ENST00000427711 313 ntBASIC3.81□□□□□ -1.8
COL4A3BPQ9Y5P4 AC124916.1-201ENST00000444020 547 ntBASIC3.81□□□□□ -1.8
COL4A3BPQ9Y5P4 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.81□□□□□ -1.8
COL4A3BPQ9Y5P4 RN7SL601P-201ENST00000471221 293 ntBASIC3.81□□□□□ -1.8
COL4A3BPQ9Y5P4 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.81□□□□□ -1.8
COL4A3BPQ9Y5P4 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.81□□□□□ -1.8
COL4A3BPQ9Y5P4 MRPS36P2-201ENST00000512569 299 ntBASIC3.81□□□□□ -1.8
COL4A3BPQ9Y5P4 RNU6-377P-201ENST00000515965 102 ntBASIC3.81□□□□□ -1.8
COL4A3BPQ9Y5P4 RN7SKP256-201ENST00000517201 314 ntBASIC3.81□□□□□ -1.8
COL4A3BPQ9Y5P4 IGKV2-26-201ENST00000518305 343 ntBASIC3.81□□□□□ -1.8
COL4A3BPQ9Y5P4 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.81□□□□□ -1.8
COL4A3BPQ9Y5P4 COPS8P3-201ENST00000526024 482 ntBASIC3.81□□□□□ -1.8
COL4A3BPQ9Y5P4 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.81□□□□□ -1.8
COL4A3BPQ9Y5P4 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.81□□□□□ -1.8
COL4A3BPQ9Y5P4 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.81□□□□□ -1.8
COL4A3BPQ9Y5P4 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.81□□□□□ -1.8
COL4A3BPQ9Y5P4 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.81□□□□□ -1.8
COL4A3BPQ9Y5P4 AC123912.5-201ENST00000605470 343 ntBASIC3.81□□□□□ -1.8
COL4A3BPQ9Y5P4 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
COL4A3BPQ9Y5P4 uc_338.14-201ENST00000613162 166 ntBASIC3.81□□□□□ -1.8
COL4A3BPQ9Y5P4 AL136221.1-201ENST00000621449 509 ntBASIC3.81□□□□□ -1.8
COL4A3BPQ9Y5P4 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
COL4A3BPQ9Y5P4 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
COL4A3BPQ9Y5P4 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
COL4A3BPQ9Y5P4 AL079305.1-201ENST00000623159 3008 ntBASIC3.8□□□□□ -1.8
COL4A3BPQ9Y5P4 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
COL4A3BPQ9Y5P4 AC138393.1-203ENST00000327086 343 ntBASIC3.8□□□□□ -1.8
COL4A3BPQ9Y5P4 MIR30E-201ENST00000362104 92 ntBASIC3.8□□□□□ -1.8
COL4A3BPQ9Y5P4 RNU6-254P-201ENST00000363377 107 ntBASIC3.8□□□□□ -1.8
COL4A3BPQ9Y5P4 RNU6-1083P-201ENST00000384022 107 ntBASIC3.8□□□□□ -1.8
COL4A3BPQ9Y5P4 SNORA32.2-201ENST00000384049 122 ntBASIC3.8□□□□□ -1.8
COL4A3BPQ9Y5P4 RNU6-55P-201ENST00000411092 107 ntBASIC3.8□□□□□ -1.8
COL4A3BPQ9Y5P4 RNU6-954P-201ENST00000411355 107 ntBASIC3.8□□□□□ -1.8
COL4A3BPQ9Y5P4 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.8□□□□□ -1.8
COL4A3BPQ9Y5P4 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.8□□□□□ -1.8
COL4A3BPQ9Y5P4 RPL7P12-201ENST00000446719 750 ntBASIC3.8□□□□□ -1.8
COL4A3BPQ9Y5P4 AL031274.1-201ENST00000450334 232 ntBASIC3.8□□□□□ -1.8
COL4A3BPQ9Y5P4 MTND3P10-201ENST00000450967 341 ntBASIC3.8□□□□□ -1.8
COL4A3BPQ9Y5P4 RPS4XP2-201ENST00000458402 793 ntBASIC3.8□□□□□ -1.8
COL4A3BPQ9Y5P4 RPL23AP49-201ENST00000492925 468 ntBASIC3.8□□□□□ -1.8
COL4A3BPQ9Y5P4 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.8□□□□□ -1.8
COL4A3BPQ9Y5P4 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.8□□□□□ -1.8
COL4A3BPQ9Y5P4 AC011471.1-201ENST00000585766 187 ntBASIC3.8□□□□□ -1.8
COL4A3BPQ9Y5P4 CTHRC1P1-201ENST00000605383 469 ntBASIC3.8□□□□□ -1.8
COL4A3BPQ9Y5P4 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.8□□□□□ -1.8
COL4A3BPQ9Y5P4 RNU6-91P-201ENST00000607774 107 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 161.5 ms