Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.05□□□□□ -1.92
CLDN16Q9Y5I7 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CLDN16Q9Y5I7 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.05□□□□□ -1.92
CLDN16Q9Y5I7 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CLDN16Q9Y5I7 AC008669.1-201ENST00000565823 2178 ntBASIC3.04□□□□□ -1.92
CLDN16Q9Y5I7 MTND4P12-201ENST00000498999 1377 ntBASIC3.04□□□□□ -1.92
CLDN16Q9Y5I7 AC121333.1-201ENST00000567488 2709 ntBASIC3.04□□□□□ -1.92
CLDN16Q9Y5I7 SNORD14B-201ENST00000364533 90 ntBASIC3.04□□□□□ -1.92
CLDN16Q9Y5I7 Y_RNA.279-201ENST00000364763 95 ntBASIC3.04□□□□□ -1.92
CLDN16Q9Y5I7 RNU6-867P-201ENST00000364956 107 ntBASIC3.04□□□□□ -1.92
CLDN16Q9Y5I7 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.04□□□□□ -1.92
CLDN16Q9Y5I7 NDUFB4P5-201ENST00000415445 361 ntBASIC3.04□□□□□ -1.92
CLDN16Q9Y5I7 RPL7P10-201ENST00000417407 739 ntBASIC3.04□□□□□ -1.92
CLDN16Q9Y5I7 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.04□□□□□ -1.92
CLDN16Q9Y5I7 AC006946.1-201ENST00000429106 328 ntBASIC3.04□□□□□ -1.92
CLDN16Q9Y5I7 HMGB1P9-201ENST00000429856 646 ntBASIC3.04□□□□□ -1.92
CLDN16Q9Y5I7 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.04□□□□□ -1.92
CLDN16Q9Y5I7 NDUFB1P2-201ENST00000449477 176 ntBASIC3.04□□□□□ -1.92
CLDN16Q9Y5I7 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.04□□□□□ -1.92
CLDN16Q9Y5I7 AC006539.3-201ENST00000454258 129 ntBASIC3.04□□□□□ -1.92
CLDN16Q9Y5I7 BTF3P15-201ENST00000455606 336 ntBASIC3.04□□□□□ -1.92
CLDN16Q9Y5I7 BX510359.1-201ENST00000456973 237 ntBASIC3.04□□□□□ -1.92
CLDN16Q9Y5I7 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.04□□□□□ -1.92
CLDN16Q9Y5I7 RPS27AP10-201ENST00000496103 208 ntBASIC3.04□□□□□ -1.92
CLDN16Q9Y5I7 FAM206BP-201ENST00000510179 541 ntBASIC3.04□□□□□ -1.92
CLDN16Q9Y5I7 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.04□□□□□ -1.92
CLDN16Q9Y5I7 RNU4-49P-201ENST00000516080 140 ntBASIC3.04□□□□□ -1.92
CLDN16Q9Y5I7 RNU6-273P-201ENST00000516937 96 ntBASIC3.04□□□□□ -1.92
CLDN16Q9Y5I7 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.04□□□□□ -1.92
CLDN16Q9Y5I7 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.04□□□□□ -1.92
CLDN16Q9Y5I7 AC092794.2-201ENST00000620933 563 ntBASIC3.04□□□□□ -1.92
CLDN16Q9Y5I7 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CLDN16Q9Y5I7 ADAM3A-203ENST00000461344 2157 ntBASIC3.04□□□□□ -1.92
CLDN16Q9Y5I7 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.04□□□□□ -1.92
CLDN16Q9Y5I7 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CLDN16Q9Y5I7 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CLDN16Q9Y5I7 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
CLDN16Q9Y5I7 MTND5P1-201ENST00000445440 1375 ntBASIC3.03□□□□□ -1.92
CLDN16Q9Y5I7 RNU6-384P-201ENST00000364900 104 ntBASIC3.03□□□□□ -1.92
CLDN16Q9Y5I7 SNORD21-201ENST00000383953 95 ntBASIC3.03□□□□□ -1.92
CLDN16Q9Y5I7 Y_RNA.414-201ENST00000384011 101 ntBASIC3.03□□□□□ -1.92
CLDN16Q9Y5I7 MIR767-201ENST00000390228 109 ntBASIC3.03□□□□□ -1.92
CLDN16Q9Y5I7 MIR450B-201ENST00000401182 78 ntBASIC3.03□□□□□ -1.92
CLDN16Q9Y5I7 RNU2-3P-201ENST00000410144 191 ntBASIC3.03□□□□□ -1.92
CLDN16Q9Y5I7 AC022028.1-201ENST00000412054 408 ntBASIC3.03□□□□□ -1.92
CLDN16Q9Y5I7 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.03□□□□□ -1.92
CLDN16Q9Y5I7 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.03□□□□□ -1.92
CLDN16Q9Y5I7 NDUFA5P4-201ENST00000436704 385 ntBASIC3.03□□□□□ -1.92
CLDN16Q9Y5I7 CYCSP32-201ENST00000440548 321 ntBASIC3.03□□□□□ -1.92
CLDN16Q9Y5I7 MTND4LP16-201ENST00000440828 295 ntBASIC3.03□□□□□ -1.92
CLDN16Q9Y5I7 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.03□□□□□ -1.92
CLDN16Q9Y5I7 AL671855.1-201ENST00000446875 1203 ntBASIC3.03□□□□□ -1.92
CLDN16Q9Y5I7 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.03□□□□□ -1.92
CLDN16Q9Y5I7 AC087884.1-201ENST00000469738 328 ntBASIC3.03□□□□□ -1.92
CLDN16Q9Y5I7 RN7SL807P-201ENST00000470923 297 ntBASIC3.03□□□□□ -1.92
CLDN16Q9Y5I7 AC011005.2-201ENST00000487324 359 ntBASIC3.03□□□□□ -1.92
CLDN16Q9Y5I7 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.03□□□□□ -1.92
CLDN16Q9Y5I7 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.03□□□□□ -1.92
CLDN16Q9Y5I7 AC087241.2-201ENST00000535801 324 ntBASIC3.03□□□□□ -1.92
CLDN16Q9Y5I7 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.03□□□□□ -1.92
CLDN16Q9Y5I7 AC005668.1-201ENST00000571142 476 ntBASIC3.03□□□□□ -1.92
CLDN16Q9Y5I7 MIR5680-201ENST00000577577 84 ntBASIC3.03□□□□□ -1.92
CLDN16Q9Y5I7 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.03□□□□□ -1.92
CLDN16Q9Y5I7 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.03□□□□□ -1.92
CLDN16Q9Y5I7 AL442067.2-201ENST00000614033 363 ntBASIC3.03□□□□□ -1.92
CLDN16Q9Y5I7 RMST_4.1-201ENST00000616886 107 ntBASIC3.03□□□□□ -1.92
CLDN16Q9Y5I7 AC110079.1-202ENST00000635213 138 ntBASIC3.03□□□□□ -1.92
CLDN16Q9Y5I7 AC138915.1-201ENST00000565427 1685 ntBASIC3.03□□□□□ -1.92
CLDN16Q9Y5I7 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CLDN16Q9Y5I7 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
CLDN16Q9Y5I7 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.03□□□□□ -1.93
CLDN16Q9Y5I7 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.03□□□□□ -1.93
CLDN16Q9Y5I7 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CLDN16Q9Y5I7 Y_RNA.167-201ENST00000363735 109 ntBASIC3.02□□□□□ -1.93
CLDN16Q9Y5I7 RNU6-898P-201ENST00000365627 104 ntBASIC3.02□□□□□ -1.93
CLDN16Q9Y5I7 RNU6-1013P-201ENST00000384180 107 ntBASIC3.02□□□□□ -1.93
CLDN16Q9Y5I7 RNU6-831P-201ENST00000384548 107 ntBASIC3.02□□□□□ -1.93
CLDN16Q9Y5I7 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.02□□□□□ -1.93
CLDN16Q9Y5I7 RNU6-1148P-201ENST00000410992 104 ntBASIC3.02□□□□□ -1.93
CLDN16Q9Y5I7 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.02□□□□□ -1.93
CLDN16Q9Y5I7 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.02□□□□□ -1.93
CLDN16Q9Y5I7 IFNA20P-201ENST00000436840 528 ntBASIC3.02□□□□□ -1.93
CLDN16Q9Y5I7 AL714022.1-201ENST00000439897 151 ntBASIC3.02□□□□□ -1.93
CLDN16Q9Y5I7 PPP1R2P5-201ENST00000457256 603 ntBASIC3.02□□□□□ -1.93
CLDN16Q9Y5I7 AC117503.1-201ENST00000472241 394 ntBASIC3.02□□□□□ -1.93
CLDN16Q9Y5I7 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.02□□□□□ -1.93
CLDN16Q9Y5I7 RN7SL504P-201ENST00000494496 287 ntBASIC3.02□□□□□ -1.93
CLDN16Q9Y5I7 HMGN1P12-201ENST00000499125 195 ntBASIC3.02□□□□□ -1.93
CLDN16Q9Y5I7 AC110794.1-201ENST00000505816 425 ntBASIC3.02□□□□□ -1.93
CLDN16Q9Y5I7 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.02□□□□□ -1.93
CLDN16Q9Y5I7 SNORA25.17-201ENST00000517184 124 ntBASIC3.02□□□□□ -1.93
CLDN16Q9Y5I7 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.02□□□□□ -1.93
CLDN16Q9Y5I7 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.02□□□□□ -1.93
CLDN16Q9Y5I7 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.02□□□□□ -1.93
CLDN16Q9Y5I7 CYCSP39-201ENST00000565821 309 ntBASIC3.02□□□□□ -1.93
CLDN16Q9Y5I7 MIR5004-201ENST00000579078 107 ntBASIC3.02□□□□□ -1.93
CLDN16Q9Y5I7 UBE2V2P2-201ENST00000587677 504 ntBASIC3.02□□□□□ -1.93
CLDN16Q9Y5I7 AC005498.1-201ENST00000592125 465 ntBASIC3.02□□□□□ -1.93
CLDN16Q9Y5I7 AC020895.1-201ENST00000595362 272 ntBASIC3.02□□□□□ -1.93
CLDN16Q9Y5I7 RNU6-85P-201ENST00000605989 107 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms