Protein–RNA interactions for Protein: Q9Y566

SHANK1, SH3 and multiple ankyrin repeat domains protein 1, humanhuman

Predictions only

Length 2,161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1Q9Y566 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.65□□□□□ -2.14
SHANK1Q9Y566 SEPT2P1-201ENST00000419651 180 ntBASIC1.65□□□□□ -2.14
SHANK1Q9Y566 AC027124.2-201ENST00000428249 105 ntBASIC1.65□□□□□ -2.14
SHANK1Q9Y566 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.65□□□□□ -2.14
SHANK1Q9Y566 AC079781.2-201ENST00000446424 169 ntBASIC1.65□□□□□ -2.14
SHANK1Q9Y566 AL033528.1-201ENST00000453780 140 ntBASIC1.65□□□□□ -2.14
SHANK1Q9Y566 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.65□□□□□ -2.14
SHANK1Q9Y566 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.65□□□□□ -2.14
SHANK1Q9Y566 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC1.65□□□□□ -2.14
SHANK1Q9Y566 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.65□□□□□ -2.14
SHANK1Q9Y566 AC090572.1-201ENST00000519251 160 ntBASIC1.65□□□□□ -2.14
SHANK1Q9Y566 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.65□□□□□ -2.14
SHANK1Q9Y566 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
SHANK1Q9Y566 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
SHANK1Q9Y566 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.65□□□□□ -2.14
SHANK1Q9Y566 AC073648.5-201ENST00000603502 305 ntBASIC1.65□□□□□ -2.14
SHANK1Q9Y566 AL161729.4-201ENST00000604650 476 ntBASIC1.65□□□□□ -2.14
SHANK1Q9Y566 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.65□□□□□ -2.14
SHANK1Q9Y566 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
SHANK1Q9Y566 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.65□□□□□ -2.15
SHANK1Q9Y566 RNA5SP139-201ENST00000364340 117 ntBASIC1.65□□□□□ -2.15
SHANK1Q9Y566 MRPL42P2-201ENST00000403169 426 ntBASIC1.65□□□□□ -2.15
SHANK1Q9Y566 RNU6-516P-201ENST00000411381 104 ntBASIC1.65□□□□□ -2.15
SHANK1Q9Y566 AL358453.1-201ENST00000422522 250 ntBASIC1.65□□□□□ -2.15
SHANK1Q9Y566 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.65□□□□□ -2.15
SHANK1Q9Y566 ZNF863P-201ENST00000426746 417 ntBASIC1.65□□□□□ -2.15
SHANK1Q9Y566 MTND1P28-201ENST00000435623 950 ntBASIC1.65□□□□□ -2.15
SHANK1Q9Y566 RPS27AP8-201ENST00000452665 445 ntBASIC1.65□□□□□ -2.15
SHANK1Q9Y566 RPL31P3-201ENST00000458430 332 ntBASIC1.65□□□□□ -2.15
SHANK1Q9Y566 RNA5SP310-201ENST00000459084 116 ntBASIC1.65□□□□□ -2.15
SHANK1Q9Y566 snoU13.28-201ENST00000459235 104 ntBASIC1.65□□□□□ -2.15
SHANK1Q9Y566 AL135752.1-201ENST00000479477 471 ntBASIC1.65□□□□□ -2.15
SHANK1Q9Y566 AC104564.1-201ENST00000493028 407 ntBASIC1.65□□□□□ -2.15
SHANK1Q9Y566 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.65□□□□□ -2.15
SHANK1Q9Y566 RNA5SP290-201ENST00000517133 127 ntBASIC1.65□□□□□ -2.15
SHANK1Q9Y566 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
SHANK1Q9Y566 AC123904.2-201ENST00000548059 300 ntBASIC1.65□□□□□ -2.15
SHANK1Q9Y566 U73023.1-201ENST00000603134 700 ntBASIC1.65□□□□□ -2.15
SHANK1Q9Y566 AC087752.4-201ENST00000605911 462 ntBASIC1.65□□□□□ -2.15
SHANK1Q9Y566 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
SHANK1Q9Y566 uc_338.12-201ENST00000616344 181 ntBASIC1.65□□□□□ -2.15
SHANK1Q9Y566 FRG1KP-201ENST00000623592 341 ntBASIC1.65□□□□□ -2.15
SHANK1Q9Y566 AC092192.1-201ENST00000633154 1018 ntBASIC1.65□□□□□ -2.15
SHANK1Q9Y566 TEX21P-201ENST00000447107 1476 ntBASIC1.65□□□□□ -2.15
SHANK1Q9Y566 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
SHANK1Q9Y566 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
SHANK1Q9Y566 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
SHANK1Q9Y566 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
SHANK1Q9Y566 MAPK10-266ENST00000641066 6555 ntBASIC1.65□□□□□ -2.15
SHANK1Q9Y566 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC1.64□□□□□ -2.15
SHANK1Q9Y566 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.64□□□□□ -2.15
SHANK1Q9Y566 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.64□□□□□ -2.15
SHANK1Q9Y566 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.64□□□□□ -2.15
SHANK1Q9Y566 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
SHANK1Q9Y566 MIRLET7G-201ENST00000362280 84 ntBASIC1.64□□□□□ -2.15
SHANK1Q9Y566 U8.3-201ENST00000363321 132 ntBASIC1.64□□□□□ -2.15
SHANK1Q9Y566 RNU6-108P-201ENST00000365558 107 ntBASIC1.64□□□□□ -2.15
SHANK1Q9Y566 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
SHANK1Q9Y566 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
SHANK1Q9Y566 RNU6-1103P-201ENST00000384150 107 ntBASIC1.64□□□□□ -2.15
SHANK1Q9Y566 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
SHANK1Q9Y566 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
SHANK1Q9Y566 MTCYBP36-201ENST00000404146 440 ntBASIC1.64□□□□□ -2.15
SHANK1Q9Y566 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.64□□□□□ -2.15
SHANK1Q9Y566 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.64□□□□□ -2.15
SHANK1Q9Y566 ELOCP17-201ENST00000414751 326 ntBASIC1.64□□□□□ -2.15
SHANK1Q9Y566 AC098614.2-201ENST00000426040 255 ntBASIC1.64□□□□□ -2.15
SHANK1Q9Y566 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.64□□□□□ -2.15
SHANK1Q9Y566 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
SHANK1Q9Y566 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.64□□□□□ -2.15
SHANK1Q9Y566 MTCO3P5-201ENST00000433620 714 ntBASIC1.64□□□□□ -2.15
SHANK1Q9Y566 AL592447.1-201ENST00000447592 540 ntBASIC1.64□□□□□ -2.15
SHANK1Q9Y566 MTND1P29-201ENST00000448112 647 ntBASIC1.64□□□□□ -2.15
SHANK1Q9Y566 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.64□□□□□ -2.15
SHANK1Q9Y566 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.64□□□□□ -2.15
SHANK1Q9Y566 AC013267.1-201ENST00000458227 267 ntBASIC1.64□□□□□ -2.15
SHANK1Q9Y566 KLF3P2-201ENST00000465138 268 ntBASIC1.64□□□□□ -2.15
SHANK1Q9Y566 RPL30P5-201ENST00000494923 336 ntBASIC1.64□□□□□ -2.15
SHANK1Q9Y566 AC135721.1-201ENST00000497954 479 ntBASIC1.64□□□□□ -2.15
SHANK1Q9Y566 EIF4EP3-201ENST00000498782 656 ntBASIC1.64□□□□□ -2.15
SHANK1Q9Y566 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
SHANK1Q9Y566 RNU2-10P-201ENST00000516375 211 ntBASIC1.64□□□□□ -2.15
SHANK1Q9Y566 RNA5SP471-201ENST00000516971 106 ntBASIC1.64□□□□□ -2.15
SHANK1Q9Y566 RNA5SP291-201ENST00000517222 105 ntBASIC1.64□□□□□ -2.15
SHANK1Q9Y566 IGLV3-17-201ENST00000519099 244 ntBASIC1.64□□□□□ -2.15
SHANK1Q9Y566 MIR3118-1-201ENST00000581787 76 ntBASIC1.64□□□□□ -2.15
SHANK1Q9Y566 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC1.64□□□□□ -2.15
SHANK1Q9Y566 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.64□□□□□ -2.15
SHANK1Q9Y566 AC012409.4-201ENST00000612923 249 ntBASIC1.64□□□□□ -2.15
SHANK1Q9Y566 AC110079.1-202ENST00000635213 138 ntBASIC1.64□□□□□ -2.15
SHANK1Q9Y566 AC099654.7-201ENST00000635788 2127 ntBASIC1.64□□□□□ -2.15
SHANK1Q9Y566 Y_RNA.374-201ENST00000365606 101 ntBASIC1.64□□□□□ -2.15
SHANK1Q9Y566 RNU1-39P-201ENST00000383897 165 ntBASIC1.64□□□□□ -2.15
SHANK1Q9Y566 RNU1-109P-201ENST00000383960 147 ntBASIC1.64□□□□□ -2.15
SHANK1Q9Y566 MIR325-201ENST00000385260 98 ntBASIC1.64□□□□□ -2.15
SHANK1Q9Y566 UBE2D3P2-201ENST00000424409 445 ntBASIC1.64□□□□□ -2.15
SHANK1Q9Y566 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.64□□□□□ -2.15
SHANK1Q9Y566 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.64□□□□□ -2.15
SHANK1Q9Y566 RPL7L1P10-201ENST00000427790 463 ntBASIC1.64□□□□□ -2.15
SHANK1Q9Y566 SNRPEP9-201ENST00000436794 238 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms