Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 MIR27B-201ENST00000385129 97 ntBASIC2.38□□□□□ -2.03
ATG4BQ9Y4P1 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
ATG4BQ9Y4P1 OR51A5P-201ENST00000415429 942 ntBASIC2.38□□□□□ -2.03
ATG4BQ9Y4P1 AC104389.3-201ENST00000445629 235 ntBASIC2.38□□□□□ -2.03
ATG4BQ9Y4P1 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
ATG4BQ9Y4P1 AC092001.1-201ENST00000453012 261 ntBASIC2.38□□□□□ -2.03
ATG4BQ9Y4P1 C1DP4-201ENST00000455429 424 ntBASIC2.38□□□□□ -2.03
ATG4BQ9Y4P1 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.38□□□□□ -2.03
ATG4BQ9Y4P1 AC133134.1-201ENST00000466800 359 ntBASIC2.38□□□□□ -2.03
ATG4BQ9Y4P1 AC117522.2-201ENST00000510049 657 ntBASIC2.38□□□□□ -2.03
ATG4BQ9Y4P1 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
ATG4BQ9Y4P1 AC114781.4-201ENST00000513707 639 ntBASIC2.38□□□□□ -2.03
ATG4BQ9Y4P1 RN7SKP298-201ENST00000515950 94 ntBASIC2.38□□□□□ -2.03
ATG4BQ9Y4P1 SNORA31.6-201ENST00000516241 130 ntBASIC2.38□□□□□ -2.03
ATG4BQ9Y4P1 RNU6-445P-201ENST00000516949 107 ntBASIC2.38□□□□□ -2.03
ATG4BQ9Y4P1 BTF3P12-201ENST00000519620 469 ntBASIC2.38□□□□□ -2.03
ATG4BQ9Y4P1 RANP3-201ENST00000530970 276 ntBASIC2.38□□□□□ -2.03
ATG4BQ9Y4P1 SUB1P2-201ENST00000556401 297 ntBASIC2.38□□□□□ -2.03
ATG4BQ9Y4P1 AC023824.2-201ENST00000566185 400 ntBASIC2.38□□□□□ -2.03
ATG4BQ9Y4P1 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.38□□□□□ -2.03
ATG4BQ9Y4P1 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.38□□□□□ -2.03
ATG4BQ9Y4P1 NBR2-204ENST00000587322 63 ntBASIC2.38□□□□□ -2.03
ATG4BQ9Y4P1 AC008521.1-201ENST00000587471 187 ntBASIC2.38□□□□□ -2.03
ATG4BQ9Y4P1 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.38□□□□□ -2.03
ATG4BQ9Y4P1 AC068790.2-201ENST00000602601 557 ntBASIC2.38□□□□□ -2.03
ATG4BQ9Y4P1 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.38□□□□□ -2.03
ATG4BQ9Y4P1 AC091834.1-201ENST00000614543 472 ntBASIC2.38□□□□□ -2.03
ATG4BQ9Y4P1 MIR6817-201ENST00000615588 66 ntBASIC2.38□□□□□ -2.03
ATG4BQ9Y4P1 AC099842.1-201ENST00000619919 596 ntBASIC2.38□□□□□ -2.03
ATG4BQ9Y4P1 AC138649.3-201ENST00000622154 254 ntBASIC2.38□□□□□ -2.03
ATG4BQ9Y4P1 FO624990.1-201ENST00000636373 85 ntBASIC2.38□□□□□ -2.03
ATG4BQ9Y4P1 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.38□□□□□ -2.03
ATG4BQ9Y4P1 AL109809.4-201ENST00000603520 2185 ntBASIC2.37□□□□□ -2.03
ATG4BQ9Y4P1 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
ATG4BQ9Y4P1 AL359854.1-201ENST00000614203 1594 ntBASIC2.37□□□□□ -2.03
ATG4BQ9Y4P1 RNU6-1097P-201ENST00000363586 107 ntBASIC2.37□□□□□ -2.03
ATG4BQ9Y4P1 U3.12-201ENST00000364498 214 ntBASIC2.37□□□□□ -2.03
ATG4BQ9Y4P1 RNU6-108P-201ENST00000365558 107 ntBASIC2.37□□□□□ -2.03
ATG4BQ9Y4P1 RNU6-898P-201ENST00000365627 104 ntBASIC2.37□□□□□ -2.03
ATG4BQ9Y4P1 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
ATG4BQ9Y4P1 RNU1-138P-201ENST00000384093 164 ntBASIC2.37□□□□□ -2.03
ATG4BQ9Y4P1 Y_RNA.576-201ENST00000384781 102 ntBASIC2.37□□□□□ -2.03
ATG4BQ9Y4P1 RNU6-387P-201ENST00000411331 105 ntBASIC2.37□□□□□ -2.03
ATG4BQ9Y4P1 CDK8P2-201ENST00000415020 547 ntBASIC2.37□□□□□ -2.03
ATG4BQ9Y4P1 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.37□□□□□ -2.03
ATG4BQ9Y4P1 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
ATG4BQ9Y4P1 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.37□□□□□ -2.03
ATG4BQ9Y4P1 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.37□□□□□ -2.03
ATG4BQ9Y4P1 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.37□□□□□ -2.03
ATG4BQ9Y4P1 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.37□□□□□ -2.03
ATG4BQ9Y4P1 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.37□□□□□ -2.03
ATG4BQ9Y4P1 CR769767.1-201ENST00000436337 346 ntBASIC2.37□□□□□ -2.03
ATG4BQ9Y4P1 NDUFB1P2-201ENST00000449477 176 ntBASIC2.37□□□□□ -2.03
ATG4BQ9Y4P1 AL583843.1-201ENST00000456070 346 ntBASIC2.37□□□□□ -2.03
ATG4BQ9Y4P1 AC073901.1-201ENST00000462471 408 ntBASIC2.37□□□□□ -2.03
ATG4BQ9Y4P1 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.37□□□□□ -2.03
ATG4BQ9Y4P1 AC023194.1-201ENST00000493084 308 ntBASIC2.37□□□□□ -2.03
ATG4BQ9Y4P1 AC104806.1-201ENST00000508720 308 ntBASIC2.37□□□□□ -2.03
ATG4BQ9Y4P1 AC079140.3-201ENST00000511111 550 ntBASIC2.37□□□□□ -2.03
ATG4BQ9Y4P1 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.37□□□□□ -2.03
ATG4BQ9Y4P1 RNA5SP320-201ENST00000516263 124 ntBASIC2.37□□□□□ -2.03
ATG4BQ9Y4P1 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.37□□□□□ -2.03
ATG4BQ9Y4P1 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.37□□□□□ -2.03
ATG4BQ9Y4P1 AL356575.1-201ENST00000603008 283 ntBASIC2.37□□□□□ -2.03
ATG4BQ9Y4P1 AC008121.1-201ENST00000603244 268 ntBASIC2.37□□□□□ -2.03
ATG4BQ9Y4P1 AL645944.1-201ENST00000603857 493 ntBASIC2.37□□□□□ -2.03
ATG4BQ9Y4P1 RNU6-91P-201ENST00000607774 107 ntBASIC2.37□□□□□ -2.03
ATG4BQ9Y4P1 AL359740.1-201ENST00000624340 592 ntBASIC2.37□□□□□ -2.03
ATG4BQ9Y4P1 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.37□□□□□ -2.03
ATG4BQ9Y4P1 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
ATG4BQ9Y4P1 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
ATG4BQ9Y4P1 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
ATG4BQ9Y4P1 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.36□□□□□ -2.03
ATG4BQ9Y4P1 RNU6-116P-201ENST00000384042 109 ntBASIC2.36□□□□□ -2.03
ATG4BQ9Y4P1 RNU6-74P-201ENST00000384235 107 ntBASIC2.36□□□□□ -2.03
ATG4BQ9Y4P1 RNU6-166P-201ENST00000384371 107 ntBASIC2.36□□□□□ -2.03
ATG4BQ9Y4P1 MIR518D-201ENST00000385014 87 ntBASIC2.36□□□□□ -2.03
ATG4BQ9Y4P1 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.36□□□□□ -2.03
ATG4BQ9Y4P1 DEFB108C-201ENST00000400154 252 ntBASIC2.36□□□□□ -2.03
ATG4BQ9Y4P1 U6atac.2-201ENST00000408644 118 ntBASIC2.36□□□□□ -2.03
ATG4BQ9Y4P1 RNU2-9P-201ENST00000410194 145 ntBASIC2.36□□□□□ -2.03
ATG4BQ9Y4P1 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.36□□□□□ -2.03
ATG4BQ9Y4P1 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.36□□□□□ -2.03
ATG4BQ9Y4P1 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.36□□□□□ -2.03
ATG4BQ9Y4P1 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.36□□□□□ -2.03
ATG4BQ9Y4P1 BTF3P15-201ENST00000455606 336 ntBASIC2.36□□□□□ -2.03
ATG4BQ9Y4P1 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.36□□□□□ -2.03
ATG4BQ9Y4P1 RPS29P15-201ENST00000458329 171 ntBASIC2.36□□□□□ -2.03
ATG4BQ9Y4P1 AC018437.1-201ENST00000492214 406 ntBASIC2.36□□□□□ -2.03
ATG4BQ9Y4P1 FAM92A1P2-202ENST00000504766 877 ntBASIC2.36□□□□□ -2.03
ATG4BQ9Y4P1 TBCAP3-201ENST00000512475 312 ntBASIC2.36□□□□□ -2.03
ATG4BQ9Y4P1 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.36□□□□□ -2.03
ATG4BQ9Y4P1 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.36□□□□□ -2.03
ATG4BQ9Y4P1 RN7SKP24-201ENST00000515888 284 ntBASIC2.36□□□□□ -2.03
ATG4BQ9Y4P1 RNA5SP148-201ENST00000516527 94 ntBASIC2.36□□□□□ -2.03
ATG4BQ9Y4P1 MTCO2P4-201ENST00000517968 247 ntBASIC2.36□□□□□ -2.03
ATG4BQ9Y4P1 OR5AQ1P-201ENST00000527596 927 ntBASIC2.36□□□□□ -2.03
ATG4BQ9Y4P1 OR4R1P-201ENST00000529879 463 ntBASIC2.36□□□□□ -2.03
ATG4BQ9Y4P1 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.36□□□□□ -2.03
ATG4BQ9Y4P1 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms