Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
KCNIP3Q9Y2W7 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
KCNIP3Q9Y2W7 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.9□□□□□ -2.11
KCNIP3Q9Y2W7 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.89□□□□□ -2.11
KCNIP3Q9Y2W7 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KCNIP3Q9Y2W7 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
KCNIP3Q9Y2W7 RNU6-1010P-201ENST00000362757 107 ntBASIC1.89□□□□□ -2.11
KCNIP3Q9Y2W7 SNORD114-19-201ENST00000363072 75 ntBASIC1.89□□□□□ -2.11
KCNIP3Q9Y2W7 U8.3-201ENST00000363321 132 ntBASIC1.89□□□□□ -2.11
KCNIP3Q9Y2W7 RNY1P12-201ENST00000364251 105 ntBASIC1.89□□□□□ -2.11
KCNIP3Q9Y2W7 MIR578-201ENST00000384828 96 ntBASIC1.89□□□□□ -2.11
KCNIP3Q9Y2W7 MIR17-201ENST00000385012 84 ntBASIC1.89□□□□□ -2.11
KCNIP3Q9Y2W7 MIR10A-201ENST00000385043 110 ntBASIC1.89□□□□□ -2.11
KCNIP3Q9Y2W7 MIR34A-201ENST00000385130 110 ntBASIC1.89□□□□□ -2.11
KCNIP3Q9Y2W7 UBE2V1P2-201ENST00000397758 440 ntBASIC1.89□□□□□ -2.11
KCNIP3Q9Y2W7 AL365203.2-201ENST00000423444 196 ntBASIC1.89□□□□□ -2.11
KCNIP3Q9Y2W7 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.89□□□□□ -2.11
KCNIP3Q9Y2W7 ARL5AP4-201ENST00000430731 512 ntBASIC1.89□□□□□ -2.11
KCNIP3Q9Y2W7 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.89□□□□□ -2.11
KCNIP3Q9Y2W7 RPS15AP28-201ENST00000435088 386 ntBASIC1.89□□□□□ -2.11
KCNIP3Q9Y2W7 AC104850.1-201ENST00000435940 476 ntBASIC1.89□□□□□ -2.11
KCNIP3Q9Y2W7 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.89□□□□□ -2.11
KCNIP3Q9Y2W7 AL360271.2-201ENST00000447710 161 ntBASIC1.89□□□□□ -2.11
KCNIP3Q9Y2W7 AC004924.1-201ENST00000480160 781 ntBASIC1.89□□□□□ -2.11
KCNIP3Q9Y2W7 RNA5SP320-201ENST00000516263 124 ntBASIC1.89□□□□□ -2.11
KCNIP3Q9Y2W7 SCARNA24.1-201ENST00000516465 137 ntBASIC1.89□□□□□ -2.11
KCNIP3Q9Y2W7 RNU6-1220P-201ENST00000517126 108 ntBASIC1.89□□□□□ -2.11
KCNIP3Q9Y2W7 AC118273.2-201ENST00000532092 465 ntBASIC1.89□□□□□ -2.11
KCNIP3Q9Y2W7 AC021269.2-201ENST00000532318 330 ntBASIC1.89□□□□□ -2.11
KCNIP3Q9Y2W7 CR383656.8-201ENST00000549046 145 ntBASIC1.89□□□□□ -2.11
KCNIP3Q9Y2W7 AC008521.1-201ENST00000587471 187 ntBASIC1.89□□□□□ -2.11
KCNIP3Q9Y2W7 BNIP3P8-201ENST00000597863 560 ntBASIC1.89□□□□□ -2.11
KCNIP3Q9Y2W7 AC108479.2-201ENST00000617314 601 ntBASIC1.89□□□□□ -2.11
KCNIP3Q9Y2W7 AC009159.2-201ENST00000617603 606 ntBASIC1.89□□□□□ -2.11
KCNIP3Q9Y2W7 U6.42-201ENST00000618440 107 ntBASIC1.89□□□□□ -2.11
KCNIP3Q9Y2W7 AL162373.1-201ENST00000620433 407 ntBASIC1.89□□□□□ -2.11
KCNIP3Q9Y2W7 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.89□□□□□ -2.11
KCNIP3Q9Y2W7 SCARNA4-202ENST00000625402 129 ntBASIC1.89□□□□□ -2.11
KCNIP3Q9Y2W7 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KCNIP3Q9Y2W7 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.88□□□□□ -2.11
KCNIP3Q9Y2W7 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KCNIP3Q9Y2W7 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.88□□□□□ -2.11
KCNIP3Q9Y2W7 SNORA16B-201ENST00000364674 135 ntBASIC1.88□□□□□ -2.11
KCNIP3Q9Y2W7 RNU6-384P-201ENST00000364900 104 ntBASIC1.88□□□□□ -2.11
KCNIP3Q9Y2W7 RNU6-169P-201ENST00000365336 107 ntBASIC1.88□□□□□ -2.11
KCNIP3Q9Y2W7 OR5H15-201ENST00000383696 930 ntBASIC1.88□□□□□ -2.11
KCNIP3Q9Y2W7 RNU1-57P-201ENST00000384491 166 ntBASIC1.88□□□□□ -2.11
KCNIP3Q9Y2W7 RNU6-387P-201ENST00000411331 105 ntBASIC1.88□□□□□ -2.11
KCNIP3Q9Y2W7 RNA5SP270-201ENST00000411361 118 ntBASIC1.88□□□□□ -2.11
KCNIP3Q9Y2W7 RPS3AP3-201ENST00000411933 242 ntBASIC1.88□□□□□ -2.11
KCNIP3Q9Y2W7 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
KCNIP3Q9Y2W7 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.88□□□□□ -2.11
KCNIP3Q9Y2W7 MTCYBP5-201ENST00000423752 1135 ntBASIC1.88□□□□□ -2.11
KCNIP3Q9Y2W7 AC008267.5-201ENST00000424928 265 ntBASIC1.88□□□□□ -2.11
KCNIP3Q9Y2W7 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.88□□□□□ -2.11
KCNIP3Q9Y2W7 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.88□□□□□ -2.11
KCNIP3Q9Y2W7 CALM1P1-201ENST00000442082 433 ntBASIC1.88□□□□□ -2.11
KCNIP3Q9Y2W7 AC009238.1-201ENST00000442165 424 ntBASIC1.88□□□□□ -2.11
KCNIP3Q9Y2W7 AC009237.6-201ENST00000446969 424 ntBASIC1.88□□□□□ -2.11
KCNIP3Q9Y2W7 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.88□□□□□ -2.11
KCNIP3Q9Y2W7 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.88□□□□□ -2.11
KCNIP3Q9Y2W7 CKS1BP2-201ENST00000497342 240 ntBASIC1.88□□□□□ -2.11
KCNIP3Q9Y2W7 RBBP4P6-201ENST00000508098 202 ntBASIC1.88□□□□□ -2.11
KCNIP3Q9Y2W7 RNU6-685P-201ENST00000517088 95 ntBASIC1.88□□□□□ -2.11
KCNIP3Q9Y2W7 AC109329.1-201ENST00000518744 317 ntBASIC1.88□□□□□ -2.11
KCNIP3Q9Y2W7 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.88□□□□□ -2.11
KCNIP3Q9Y2W7 MTCYBP33-201ENST00000575007 1130 ntBASIC1.88□□□□□ -2.11
KCNIP3Q9Y2W7 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.88□□□□□ -2.11
KCNIP3Q9Y2W7 AC025165.5-201ENST00000602802 578 ntBASIC1.88□□□□□ -2.11
KCNIP3Q9Y2W7 SRGNP1-201ENST00000603392 451 ntBASIC1.88□□□□□ -2.11
KCNIP3Q9Y2W7 AC021646.1-201ENST00000605469 484 ntBASIC1.88□□□□□ -2.11
KCNIP3Q9Y2W7 AC093788.1-201ENST00000609356 927 ntBASIC1.88□□□□□ -2.11
KCNIP3Q9Y2W7 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.88□□□□□ -2.11
KCNIP3Q9Y2W7 AC138649.3-201ENST00000622154 254 ntBASIC1.88□□□□□ -2.11
KCNIP3Q9Y2W7 AC025034.2-201ENST00000623264 286 ntBASIC1.88□□□□□ -2.11
KCNIP3Q9Y2W7 AL603839.4-201ENST00000624658 1005 ntBASIC1.88□□□□□ -2.11
KCNIP3Q9Y2W7 AC019226.2-201ENST00000625973 424 ntBASIC1.88□□□□□ -2.11
KCNIP3Q9Y2W7 AL365361.1-201ENST00000566942 3481 ntBASIC1.88□□□□□ -2.11
KCNIP3Q9Y2W7 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
KCNIP3Q9Y2W7 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
KCNIP3Q9Y2W7 RNU6-622P-201ENST00000384272 103 ntBASIC1.87□□□□□ -2.11
KCNIP3Q9Y2W7 RNU6-1179P-201ENST00000384667 107 ntBASIC1.87□□□□□ -2.11
KCNIP3Q9Y2W7 EDDM3CP-201ENST00000415977 425 ntBASIC1.87□□□□□ -2.11
KCNIP3Q9Y2W7 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.87□□□□□ -2.11
KCNIP3Q9Y2W7 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.87□□□□□ -2.11
KCNIP3Q9Y2W7 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC1.87□□□□□ -2.11
KCNIP3Q9Y2W7 AL136380.1-201ENST00000447970 162 ntBASIC1.87□□□□□ -2.11
KCNIP3Q9Y2W7 AL133217.1-201ENST00000450980 425 ntBASIC1.87□□□□□ -2.11
KCNIP3Q9Y2W7 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.87□□□□□ -2.11
KCNIP3Q9Y2W7 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.87□□□□□ -2.11
KCNIP3Q9Y2W7 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC1.87□□□□□ -2.11
KCNIP3Q9Y2W7 snoU109.2-201ENST00000459316 135 ntBASIC1.87□□□□□ -2.11
KCNIP3Q9Y2W7 RPL7P49-201ENST00000471402 708 ntBASIC1.87□□□□□ -2.11
KCNIP3Q9Y2W7 AC126389.1-201ENST00000477436 290 ntBASIC1.87□□□□□ -2.11
KCNIP3Q9Y2W7 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC1.87□□□□□ -2.11
KCNIP3Q9Y2W7 AC114781.4-201ENST00000513707 639 ntBASIC1.87□□□□□ -2.11
KCNIP3Q9Y2W7 Vault.3-201ENST00000516676 95 ntBASIC1.87□□□□□ -2.11
KCNIP3Q9Y2W7 SNORA31.25-201ENST00000517242 134 ntBASIC1.87□□□□□ -2.11
KCNIP3Q9Y2W7 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.87□□□□□ -2.11
KCNIP3Q9Y2W7 AC090572.1-201ENST00000519251 160 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms