Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 MIR4660-201ENST00000583549 74 ntBASIC4.9□□□□□ -1.63
NOD1Q9Y239 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.9□□□□□ -1.63
NOD1Q9Y239 AC037487.3-201ENST00000606668 112 ntBASIC4.9□□□□□ -1.63
NOD1Q9Y239 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.9□□□□□ -1.63
NOD1Q9Y239 SNX18P1Y-201ENST00000616231 511 ntBASIC4.9□□□□□ -1.63
NOD1Q9Y239 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
NOD1Q9Y239 AC112200.1-201ENST00000625015 234 ntBASIC4.9□□□□□ -1.63
NOD1Q9Y239 Clostridiales-1.2-201ENST00000636724 160 ntBASIC4.9□□□□□ -1.63
NOD1Q9Y239 U2.21-201ENST00000637295 81 ntBASIC4.9□□□□□ -1.63
NOD1Q9Y239 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.9□□□□□ -1.63
NOD1Q9Y239 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
NOD1Q9Y239 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.9□□□□□ -1.63
NOD1Q9Y239 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NOD1Q9Y239 AP001273.1-201ENST00000624493 3152 ntBASIC4.9□□□□□ -1.63
NOD1Q9Y239 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
NOD1Q9Y239 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
NOD1Q9Y239 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
NOD1Q9Y239 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NOD1Q9Y239 RNU6-217P-201ENST00000384164 104 ntBASIC4.89□□□□□ -1.63
NOD1Q9Y239 SNORD116-20-201ENST00000384529 92 ntBASIC4.89□□□□□ -1.63
NOD1Q9Y239 SNORA11F-201ENST00000408237 128 ntBASIC4.89□□□□□ -1.63
NOD1Q9Y239 Y_RNA.626-201ENST00000411288 95 ntBASIC4.89□□□□□ -1.63
NOD1Q9Y239 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.89□□□□□ -1.63
NOD1Q9Y239 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.89□□□□□ -1.63
NOD1Q9Y239 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.89□□□□□ -1.63
NOD1Q9Y239 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC4.89□□□□□ -1.63
NOD1Q9Y239 SNORA84-201ENST00000459229 133 ntBASIC4.89□□□□□ -1.63
NOD1Q9Y239 RPL23AP65-201ENST00000475608 468 ntBASIC4.89□□□□□ -1.63
NOD1Q9Y239 AKIRIN2P1-201ENST00000505898 352 ntBASIC4.89□□□□□ -1.63
NOD1Q9Y239 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.89□□□□□ -1.63
NOD1Q9Y239 Y_RNA.703-201ENST00000516846 111 ntBASIC4.89□□□□□ -1.63
NOD1Q9Y239 RNU6-1212P-201ENST00000517023 104 ntBASIC4.89□□□□□ -1.63
NOD1Q9Y239 AC005255.1-201ENST00000593748 216 ntBASIC4.89□□□□□ -1.63
NOD1Q9Y239 BPIFA4P-203ENST00000603168 689 ntBASIC4.89□□□□□ -1.63
NOD1Q9Y239 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.89□□□□□ -1.63
NOD1Q9Y239 MIR8059-201ENST00000620427 81 ntBASIC4.89□□□□□ -1.63
NOD1Q9Y239 AC112484.5-201ENST00000624189 228 ntBASIC4.89□□□□□ -1.63
NOD1Q9Y239 AL079305.1-201ENST00000623159 3008 ntBASIC4.89□□□□□ -1.63
NOD1Q9Y239 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.89□□□□□ -1.63
NOD1Q9Y239 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NOD1Q9Y239 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.89□□□□□ -1.63
NOD1Q9Y239 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NOD1Q9Y239 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NOD1Q9Y239 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
NOD1Q9Y239 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
NOD1Q9Y239 AC092376.2-201ENST00000622621 4116 ntBASIC4.89□□□□□ -1.63
NOD1Q9Y239 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.89□□□□□ -1.63
NOD1Q9Y239 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.89□□□□□ -1.63
NOD1Q9Y239 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NOD1Q9Y239 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
NOD1Q9Y239 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
NOD1Q9Y239 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
NOD1Q9Y239 MAPK10-286ENST00000641208 8747 ntBASIC4.88□□□□□ -1.63
NOD1Q9Y239 RNU6-740P-201ENST00000364734 105 ntBASIC4.88□□□□□ -1.63
NOD1Q9Y239 RNU6-142P-201ENST00000384019 107 ntBASIC4.88□□□□□ -1.63
NOD1Q9Y239 RNU6-21P-201ENST00000384710 107 ntBASIC4.88□□□□□ -1.63
NOD1Q9Y239 RNU6-493P-201ENST00000391321 108 ntBASIC4.88□□□□□ -1.63
NOD1Q9Y239 MTCO2P33-201ENST00000402100 465 ntBASIC4.88□□□□□ -1.63
NOD1Q9Y239 RNU5A-5P-201ENST00000411054 116 ntBASIC4.88□□□□□ -1.63
NOD1Q9Y239 COX6CP10-201ENST00000416832 224 ntBASIC4.88□□□□□ -1.63
NOD1Q9Y239 CKS1BP6-201ENST00000424932 240 ntBASIC4.88□□□□□ -1.63
NOD1Q9Y239 HMGN2P27-201ENST00000427352 270 ntBASIC4.88□□□□□ -1.63
NOD1Q9Y239 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.88□□□□□ -1.63
NOD1Q9Y239 RPL23AP52-201ENST00000439311 478 ntBASIC4.88□□□□□ -1.63
NOD1Q9Y239 AL356535.1-201ENST00000440335 398 ntBASIC4.88□□□□□ -1.63
NOD1Q9Y239 AC096638.1-201ENST00000444678 216 ntBASIC4.88□□□□□ -1.63
NOD1Q9Y239 BTF3P6-201ENST00000448054 499 ntBASIC4.88□□□□□ -1.63
NOD1Q9Y239 AC078817.1-201ENST00000492623 435 ntBASIC4.88□□□□□ -1.63
NOD1Q9Y239 RN7SL812P-201ENST00000493791 279 ntBASIC4.88□□□□□ -1.63
NOD1Q9Y239 RPL30P5-201ENST00000494923 336 ntBASIC4.88□□□□□ -1.63
NOD1Q9Y239 RNU6-1282P-201ENST00000516735 96 ntBASIC4.88□□□□□ -1.63
NOD1Q9Y239 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.88□□□□□ -1.63
NOD1Q9Y239 Z83818.1-201ENST00000603584 150 ntBASIC4.88□□□□□ -1.63
NOD1Q9Y239 AC079587.1-201ENST00000603846 277 ntBASIC4.88□□□□□ -1.63
NOD1Q9Y239 AC005296.1-201ENST00000616145 209 ntBASIC4.88□□□□□ -1.63
NOD1Q9Y239 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.88□□□□□ -1.63
NOD1Q9Y239 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
NOD1Q9Y239 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
NOD1Q9Y239 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
NOD1Q9Y239 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NOD1Q9Y239 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NOD1Q9Y239 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.87□□□□□ -1.63
NOD1Q9Y239 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NOD1Q9Y239 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.87□□□□□ -1.63
NOD1Q9Y239 AC090740.1-201ENST00000623193 2262 ntBASIC4.87□□□□□ -1.63
NOD1Q9Y239 RNU6-778P-201ENST00000363269 103 ntBASIC4.87□□□□□ -1.63
NOD1Q9Y239 SNORD32A-201ENST00000364805 84 ntBASIC4.87□□□□□ -1.63
NOD1Q9Y239 Y_RNA.569-201ENST00000384749 103 ntBASIC4.87□□□□□ -1.63
NOD1Q9Y239 RPS20P14-201ENST00000412545 360 ntBASIC4.87□□□□□ -1.63
NOD1Q9Y239 RPL26P27-201ENST00000414397 437 ntBASIC4.87□□□□□ -1.63
NOD1Q9Y239 HMGN2P30-201ENST00000423237 256 ntBASIC4.87□□□□□ -1.63
NOD1Q9Y239 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.87□□□□□ -1.63
NOD1Q9Y239 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
NOD1Q9Y239 RN7SL817P-201ENST00000480777 288 ntBASIC4.87□□□□□ -1.63
NOD1Q9Y239 RNU7-110P-201ENST00000516891 62 ntBASIC4.87□□□□□ -1.63
NOD1Q9Y239 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.87□□□□□ -1.63
NOD1Q9Y239 TRAV8-5-201ENST00000537369 341 ntBASIC4.87□□□□□ -1.63
NOD1Q9Y239 AL162424.1-201ENST00000602325 221 ntBASIC4.87□□□□□ -1.63
NOD1Q9Y239 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NOD1Q9Y239 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 139.1 ms