Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 RNU2-48P-201ENST00000410694 191 ntBASIC1.17□□□□□ -2.22
HHLA3Q9XRX5 VN1R36P-201ENST00000414936 291 ntBASIC1.17□□□□□ -2.22
HHLA3Q9XRX5 LARP1BP3-201ENST00000437229 869 ntBASIC1.17□□□□□ -2.22
HHLA3Q9XRX5 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.17□□□□□ -2.22
HHLA3Q9XRX5 AC007677.1-201ENST00000445757 515 ntBASIC1.17□□□□□ -2.22
HHLA3Q9XRX5 KATNBL1P6-201ENST00000453433 915 ntBASIC1.17□□□□□ -2.22
HHLA3Q9XRX5 AC010587.2-201ENST00000511727 448 ntBASIC1.17□□□□□ -2.22
HHLA3Q9XRX5 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.17□□□□□ -2.22
HHLA3Q9XRX5 RNA5SP216-201ENST00000516111 123 ntBASIC1.17□□□□□ -2.22
HHLA3Q9XRX5 MTND1P36-201ENST00000522384 936 ntBASIC1.17□□□□□ -2.22
HHLA3Q9XRX5 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC1.17□□□□□ -2.22
HHLA3Q9XRX5 CYCSP27-201ENST00000527643 293 ntBASIC1.17□□□□□ -2.22
HHLA3Q9XRX5 AK6P1-201ENST00000540219 478 ntBASIC1.17□□□□□ -2.22
HHLA3Q9XRX5 AC027807.1-201ENST00000559921 996 ntBASIC1.17□□□□□ -2.22
HHLA3Q9XRX5 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.17□□□□□ -2.22
HHLA3Q9XRX5 AC136619.2-201ENST00000563361 631 ntBASIC1.17□□□□□ -2.22
HHLA3Q9XRX5 AC023813.2-201ENST00000564321 469 ntBASIC1.17□□□□□ -2.22
HHLA3Q9XRX5 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.17□□□□□ -2.22
HHLA3Q9XRX5 MIR544B-201ENST00000582372 78 ntBASIC1.17□□□□□ -2.22
HHLA3Q9XRX5 RPL30P11-203ENST00000598995 310 ntBASIC1.17□□□□□ -2.22
HHLA3Q9XRX5 AL512643.1-201ENST00000635735 524 ntBASIC1.17□□□□□ -2.22
HHLA3Q9XRX5 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.17□□□□□ -2.22
HHLA3Q9XRX5 AC006026.1-201ENST00000444025 1803 ntBASIC1.17□□□□□ -2.22
HHLA3Q9XRX5 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.17□□□□□ -2.22
HHLA3Q9XRX5 AC138393.1-203ENST00000327086 343 ntBASIC1.16□□□□□ -2.22
HHLA3Q9XRX5 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC1.16□□□□□ -2.22
HHLA3Q9XRX5 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
HHLA3Q9XRX5 RNU6-769P-201ENST00000384407 104 ntBASIC1.16□□□□□ -2.22
HHLA3Q9XRX5 SNORA40.4-201ENST00000390971 128 ntBASIC1.16□□□□□ -2.22
HHLA3Q9XRX5 RNU6-1000P-201ENST00000391066 106 ntBASIC1.16□□□□□ -2.22
HHLA3Q9XRX5 AC068050.1-201ENST00000394891 380 ntBASIC1.16□□□□□ -2.22
HHLA3Q9XRX5 MIR1305-201ENST00000408300 86 ntBASIC1.16□□□□□ -2.22
HHLA3Q9XRX5 MIR1289-2-201ENST00000408360 111 ntBASIC1.16□□□□□ -2.22
HHLA3Q9XRX5 MIR1283-2-201ENST00000408621 87 ntBASIC1.16□□□□□ -2.22
HHLA3Q9XRX5 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.16□□□□□ -2.22
HHLA3Q9XRX5 AC074117.2-201ENST00000417130 397 ntBASIC1.16□□□□□ -2.22
HHLA3Q9XRX5 RPS3AP37-201ENST00000419176 745 ntBASIC1.16□□□□□ -2.22
HHLA3Q9XRX5 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.16□□□□□ -2.22
HHLA3Q9XRX5 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.16□□□□□ -2.22
HHLA3Q9XRX5 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC1.16□□□□□ -2.22
HHLA3Q9XRX5 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.16□□□□□ -2.22
HHLA3Q9XRX5 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.16□□□□□ -2.22
HHLA3Q9XRX5 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.16□□□□□ -2.22
HHLA3Q9XRX5 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.16□□□□□ -2.22
HHLA3Q9XRX5 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.16□□□□□ -2.22
HHLA3Q9XRX5 AL121890.1-201ENST00000435457 205 ntBASIC1.16□□□□□ -2.22
HHLA3Q9XRX5 TIMM9P1-201ENST00000436122 256 ntBASIC1.16□□□□□ -2.22
HHLA3Q9XRX5 MTCO2P20-201ENST00000437339 673 ntBASIC1.16□□□□□ -2.22
HHLA3Q9XRX5 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.16□□□□□ -2.22
HHLA3Q9XRX5 EEF1A1P39-201ENST00000440791 250 ntBASIC1.16□□□□□ -2.22
HHLA3Q9XRX5 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.16□□□□□ -2.22
HHLA3Q9XRX5 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.16□□□□□ -2.22
HHLA3Q9XRX5 AL358794.1-201ENST00000445689 381 ntBASIC1.16□□□□□ -2.22
HHLA3Q9XRX5 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC1.16□□□□□ -2.22
HHLA3Q9XRX5 AL137159.1-201ENST00000452808 512 ntBASIC1.16□□□□□ -2.22
HHLA3Q9XRX5 AC006512.1-201ENST00000468816 291 ntBASIC1.16□□□□□ -2.22
HHLA3Q9XRX5 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.16□□□□□ -2.22
HHLA3Q9XRX5 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.16□□□□□ -2.22
HHLA3Q9XRX5 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.16□□□□□ -2.22
HHLA3Q9XRX5 RNU6-143P-201ENST00000516942 93 ntBASIC1.16□□□□□ -2.22
HHLA3Q9XRX5 RNU6-667P-201ENST00000517186 102 ntBASIC1.16□□□□□ -2.22
HHLA3Q9XRX5 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.16□□□□□ -2.22
HHLA3Q9XRX5 AC135279.1-201ENST00000543493 504 ntBASIC1.16□□□□□ -2.22
HHLA3Q9XRX5 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.16□□□□□ -2.22
HHLA3Q9XRX5 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.16□□□□□ -2.22
HHLA3Q9XRX5 AC025678.1-201ENST00000567861 338 ntBASIC1.16□□□□□ -2.22
HHLA3Q9XRX5 AL354943.1-201ENST00000572103 781 ntBASIC1.16□□□□□ -2.22
HHLA3Q9XRX5 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC1.16□□□□□ -2.22
HHLA3Q9XRX5 AC026271.5-201ENST00000577873 130 ntBASIC1.16□□□□□ -2.22
HHLA3Q9XRX5 AC112220.3-201ENST00000605502 502 ntBASIC1.16□□□□□ -2.22
HHLA3Q9XRX5 AC018638.7-201ENST00000605836 1114 ntBASIC1.16□□□□□ -2.22
HHLA3Q9XRX5 AC087045.1-201ENST00000605856 382 ntBASIC1.16□□□□□ -2.22
HHLA3Q9XRX5 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.16□□□□□ -2.22
HHLA3Q9XRX5 uc_338.5-201ENST00000611839 155 ntBASIC1.16□□□□□ -2.22
HHLA3Q9XRX5 AL359314.1-201ENST00000616913 261 ntBASIC1.16□□□□□ -2.22
HHLA3Q9XRX5 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.16□□□□□ -2.22
HHLA3Q9XRX5 AC008121.3-201ENST00000618726 433 ntBASIC1.16□□□□□ -2.22
HHLA3Q9XRX5 AL138955.1-201ENST00000622881 1040 ntBASIC1.16□□□□□ -2.22
HHLA3Q9XRX5 MTND4P23-201ENST00000447723 1363 ntBASIC1.16□□□□□ -2.22
HHLA3Q9XRX5 ZNF876P-202ENST00000398732 1485 ntBASIC1.16□□□□□ -2.22
HHLA3Q9XRX5 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
HHLA3Q9XRX5 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
HHLA3Q9XRX5 RNU6-433P-201ENST00000363216 104 ntBASIC1.15□□□□□ -2.23
HHLA3Q9XRX5 SMIM11P1-201ENST00000369586 178 ntBASIC1.15□□□□□ -2.23
HHLA3Q9XRX5 MIR504-201ENST00000385065 83 ntBASIC1.15□□□□□ -2.23
HHLA3Q9XRX5 AL627390.1-201ENST00000396055 340 ntBASIC1.15□□□□□ -2.23
HHLA3Q9XRX5 PIGPP2-201ENST00000411569 458 ntBASIC1.15□□□□□ -2.23
HHLA3Q9XRX5 OR9R1P-201ENST00000412200 877 ntBASIC1.15□□□□□ -2.23
HHLA3Q9XRX5 MTATP6P20-201ENST00000414147 562 ntBASIC1.15□□□□□ -2.23
HHLA3Q9XRX5 AL078601.1-201ENST00000444542 271 ntBASIC1.15□□□□□ -2.23
HHLA3Q9XRX5 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.15□□□□□ -2.23
HHLA3Q9XRX5 AC108059.3-201ENST00000456388 214 ntBASIC1.15□□□□□ -2.23
HHLA3Q9XRX5 MTND1P3-201ENST00000484956 952 ntBASIC1.15□□□□□ -2.23
HHLA3Q9XRX5 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.15□□□□□ -2.23
HHLA3Q9XRX5 AC008834.1-201ENST00000511612 175 ntBASIC1.15□□□□□ -2.23
HHLA3Q9XRX5 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.15□□□□□ -2.23
HHLA3Q9XRX5 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
HHLA3Q9XRX5 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.15□□□□□ -2.23
HHLA3Q9XRX5 AC093249.1-201ENST00000567049 203 ntBASIC1.15□□□□□ -2.23
HHLA3Q9XRX5 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms