Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM35Q9UPQ4 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.24□□□□□ -1.41
TRIM35Q9UPQ4 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM35Q9UPQ4 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM35Q9UPQ4 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
TRIM35Q9UPQ4 RNU6-144P-201ENST00000383951 107 ntBASIC6.23□□□□□ -1.41
TRIM35Q9UPQ4 AL590762.2-201ENST00000395798 571 ntBASIC6.23□□□□□ -1.41
TRIM35Q9UPQ4 NDUFS5P4-201ENST00000412983 318 ntBASIC6.23□□□□□ -1.41
TRIM35Q9UPQ4 AC091390.3-201ENST00000426478 338 ntBASIC6.23□□□□□ -1.41
TRIM35Q9UPQ4 HMGN2P27-201ENST00000427352 270 ntBASIC6.23□□□□□ -1.41
TRIM35Q9UPQ4 AC011276.1-201ENST00000469688 323 ntBASIC6.23□□□□□ -1.41
TRIM35Q9UPQ4 UQCRHP4-201ENST00000471686 272 ntBASIC6.23□□□□□ -1.41
TRIM35Q9UPQ4 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC6.23□□□□□ -1.41
TRIM35Q9UPQ4 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.23□□□□□ -1.41
TRIM35Q9UPQ4 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
TRIM35Q9UPQ4 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC6.23□□□□□ -1.41
TRIM35Q9UPQ4 AC131055.1-201ENST00000584626 316 ntBASIC6.23□□□□□ -1.41
TRIM35Q9UPQ4 IPO5P1-202ENST00000600039 287 ntBASIC6.23□□□□□ -1.41
TRIM35Q9UPQ4 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC6.23□□□□□ -1.41
TRIM35Q9UPQ4 MIR6780A-201ENST00000615089 68 ntBASIC6.23□□□□□ -1.41
TRIM35Q9UPQ4 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC6.23□□□□□ -1.41
TRIM35Q9UPQ4 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC6.23□□□□□ -1.41
TRIM35Q9UPQ4 AL672167.1-204ENST00000641875 3017 ntBASIC6.23□□□□□ -1.41
TRIM35Q9UPQ4 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM35Q9UPQ4 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM35Q9UPQ4 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM35Q9UPQ4 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM35Q9UPQ4 SCARNA15-201ENST00000607520 4325 ntBASIC6.22□□□□□ -1.41
TRIM35Q9UPQ4 AC083837.1-201ENST00000565297 2994 ntBASIC6.22□□□□□ -1.41
TRIM35Q9UPQ4 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM35Q9UPQ4 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM35Q9UPQ4 AL590240.1-201ENST00000334118 313 ntBASIC6.22□□□□□ -1.41
TRIM35Q9UPQ4 RN7SKP186-201ENST00000365371 303 ntBASIC6.22□□□□□ -1.41
TRIM35Q9UPQ4 RNU6-1296P-201ENST00000383879 107 ntBASIC6.22□□□□□ -1.41
TRIM35Q9UPQ4 AL031003.1-201ENST00000404229 172 ntBASIC6.22□□□□□ -1.41
TRIM35Q9UPQ4 AC010469.1-201ENST00000463864 576 ntBASIC6.22□□□□□ -1.41
TRIM35Q9UPQ4 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC6.22□□□□□ -1.41
TRIM35Q9UPQ4 RNA5SP281-201ENST00000516504 135 ntBASIC6.22□□□□□ -1.41
TRIM35Q9UPQ4 AL110118.1-201ENST00000553543 400 ntBASIC6.22□□□□□ -1.41
TRIM35Q9UPQ4 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC6.22□□□□□ -1.41
TRIM35Q9UPQ4 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
TRIM35Q9UPQ4 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM35Q9UPQ4 MAPK10-304ENST00000641341 3984 ntBASIC6.22□□□□□ -1.41
TRIM35Q9UPQ4 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC6.22□□□□□ -1.41
TRIM35Q9UPQ4 FAM91A3P-201ENST00000456826 2544 ntBASIC6.22□□□□□ -1.41
TRIM35Q9UPQ4 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.22□□□□□ -1.41
TRIM35Q9UPQ4 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
TRIM35Q9UPQ4 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
TRIM35Q9UPQ4 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
TRIM35Q9UPQ4 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6.21□□□□□ -1.41
TRIM35Q9UPQ4 RNU6-1285P-201ENST00000363480 105 ntBASIC6.21□□□□□ -1.42
TRIM35Q9UPQ4 RNU6-454P-201ENST00000364292 107 ntBASIC6.21□□□□□ -1.42
TRIM35Q9UPQ4 Y_RNA.622-201ENST00000411091 108 ntBASIC6.21□□□□□ -1.42
TRIM35Q9UPQ4 AC119751.6-201ENST00000416712 186 ntBASIC6.21□□□□□ -1.42
TRIM35Q9UPQ4 AC011753.3-201ENST00000443436 406 ntBASIC6.21□□□□□ -1.42
TRIM35Q9UPQ4 snoU13.6-201ENST00000458785 104 ntBASIC6.21□□□□□ -1.42
TRIM35Q9UPQ4 RN7SL585P-201ENST00000470538 280 ntBASIC6.21□□□□□ -1.42
TRIM35Q9UPQ4 AL049874.1-201ENST00000489560 388 ntBASIC6.21□□□□□ -1.42
TRIM35Q9UPQ4 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM35Q9UPQ4 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC6.21□□□□□ -1.42
TRIM35Q9UPQ4 AC007012.1-201ENST00000567192 175 ntBASIC6.21□□□□□ -1.42
TRIM35Q9UPQ4 RN7SL690P-201ENST00000582087 240 ntBASIC6.21□□□□□ -1.42
TRIM35Q9UPQ4 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC6.21□□□□□ -1.42
TRIM35Q9UPQ4 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC6.21□□□□□ -1.42
TRIM35Q9UPQ4 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
TRIM35Q9UPQ4 AP005435.3-201ENST00000531260 3198 ntBASIC6.21□□□□□ -1.42
TRIM35Q9UPQ4 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM35Q9UPQ4 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC6.21□□□□□ -1.42
TRIM35Q9UPQ4 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC6.21□□□□□ -1.42
TRIM35Q9UPQ4 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM35Q9UPQ4 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
TRIM35Q9UPQ4 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC6.21□□□□□ -1.42
TRIM35Q9UPQ4 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM35Q9UPQ4 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC6.2□□□□□ -1.42
TRIM35Q9UPQ4 AC005005.4-201ENST00000623789 16698 ntBASIC6.2□□□□□ -1.42
TRIM35Q9UPQ4 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM35Q9UPQ4 AC079741.1-201ENST00000321498 212 ntBASIC6.2□□□□□ -1.42
TRIM35Q9UPQ4 Y_RNA.456-201ENST00000384232 111 ntBASIC6.2□□□□□ -1.42
TRIM35Q9UPQ4 RPS26P42-201ENST00000413485 326 ntBASIC6.2□□□□□ -1.42
TRIM35Q9UPQ4 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC6.2□□□□□ -1.42
TRIM35Q9UPQ4 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.2□□□□□ -1.42
TRIM35Q9UPQ4 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
TRIM35Q9UPQ4 RPS29P33-201ENST00000456717 146 ntBASIC6.2□□□□□ -1.42
TRIM35Q9UPQ4 APOA2-207ENST00000470459 416 ntTSL 5 BASIC6.2□□□□□ -1.42
TRIM35Q9UPQ4 AC016632.1-201ENST00000503994 196 ntBASIC6.2□□□□□ -1.42
TRIM35Q9UPQ4 RNU1-6P-201ENST00000516290 144 ntBASIC6.2□□□□□ -1.42
TRIM35Q9UPQ4 MIR4270-201ENST00000581799 70 ntBASIC6.2□□□□□ -1.42
TRIM35Q9UPQ4 uc_338.18-201ENST00000615451 175 ntBASIC6.2□□□□□ -1.42
TRIM35Q9UPQ4 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC6.2□□□□□ -1.42
TRIM35Q9UPQ4 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC6.2□□□□□ -1.42
TRIM35Q9UPQ4 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM35Q9UPQ4 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
TRIM35Q9UPQ4 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM35Q9UPQ4 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM35Q9UPQ4 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC6.19□□□□□ -1.42
TRIM35Q9UPQ4 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.19□□□□□ -1.42
TRIM35Q9UPQ4 DHX9P1-201ENST00000436565 3076 ntBASIC6.19□□□□□ -1.42
TRIM35Q9UPQ4 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM35Q9UPQ4 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC6.19□□□□□ -1.42
TRIM35Q9UPQ4 RNA5SP125-201ENST00000364843 120 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms