Protein–RNA interactions for Protein: Q9UKS6

PACSIN3, Protein kinase C and casein kinase substrate in neurons protein 3, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3Q9UKS6 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
PACSIN3Q9UKS6 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.53□□□□□ -1.84
PACSIN3Q9UKS6 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
PACSIN3Q9UKS6 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.53□□□□□ -1.84
PACSIN3Q9UKS6 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.53□□□□□ -1.84
PACSIN3Q9UKS6 SNORA20.1-201ENST00000364790 130 ntBASIC3.53□□□□□ -1.84
PACSIN3Q9UKS6 AP002088.1-201ENST00000382740 395 ntBASIC3.53□□□□□ -1.84
PACSIN3Q9UKS6 RNU6-213P-201ENST00000384051 104 ntBASIC3.53□□□□□ -1.84
PACSIN3Q9UKS6 MIR578-201ENST00000384828 96 ntBASIC3.53□□□□□ -1.84
PACSIN3Q9UKS6 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
PACSIN3Q9UKS6 AL138885.1-201ENST00000405921 675 ntBASIC3.53□□□□□ -1.84
PACSIN3Q9UKS6 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.53□□□□□ -1.84
PACSIN3Q9UKS6 AC006946.1-201ENST00000429106 328 ntBASIC3.53□□□□□ -1.84
PACSIN3Q9UKS6 MTND5P15-201ENST00000434246 349 ntBASIC3.53□□□□□ -1.84
PACSIN3Q9UKS6 MTCO3P8-201ENST00000453691 755 ntBASIC3.53□□□□□ -1.84
PACSIN3Q9UKS6 MTND4LP30-201ENST00000454092 297 ntBASIC3.53□□□□□ -1.84
PACSIN3Q9UKS6 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.53□□□□□ -1.84
PACSIN3Q9UKS6 AC025465.3-201ENST00000510570 311 ntBASIC3.53□□□□□ -1.84
PACSIN3Q9UKS6 FTH1P9-201ENST00000513251 355 ntBASIC3.53□□□□□ -1.84
PACSIN3Q9UKS6 SNORA25.11-201ENST00000515935 105 ntBASIC3.53□□□□□ -1.84
PACSIN3Q9UKS6 RNU6-1023P-201ENST00000516137 106 ntBASIC3.53□□□□□ -1.84
PACSIN3Q9UKS6 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.53□□□□□ -1.84
PACSIN3Q9UKS6 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.53□□□□□ -1.84
PACSIN3Q9UKS6 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.53□□□□□ -1.84
PACSIN3Q9UKS6 CYCSP30-201ENST00000546447 172 ntBASIC3.53□□□□□ -1.84
PACSIN3Q9UKS6 AC011602.1-201ENST00000546484 331 ntBASIC3.53□□□□□ -1.84
PACSIN3Q9UKS6 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.53□□□□□ -1.84
PACSIN3Q9UKS6 OR4H12P-201ENST00000556269 907 ntBASIC3.53□□□□□ -1.84
PACSIN3Q9UKS6 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.53□□□□□ -1.84
PACSIN3Q9UKS6 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PACSIN3Q9UKS6 AC090517.1-201ENST00000569307 266 ntBASIC3.53□□□□□ -1.84
PACSIN3Q9UKS6 AC006600.1-201ENST00000572529 153 ntBASIC3.53□□□□□ -1.84
PACSIN3Q9UKS6 MIR4644-201ENST00000579929 84 ntBASIC3.53□□□□□ -1.84
PACSIN3Q9UKS6 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.53□□□□□ -1.84
PACSIN3Q9UKS6 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.53□□□□□ -1.84
PACSIN3Q9UKS6 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.53□□□□□ -1.84
PACSIN3Q9UKS6 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
PACSIN3Q9UKS6 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PACSIN3Q9UKS6 AL136964.1-201ENST00000622038 2990 ntBASIC3.53□□□□□ -1.84
PACSIN3Q9UKS6 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
PACSIN3Q9UKS6 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.52□□□□□ -1.85
PACSIN3Q9UKS6 MIR30E-201ENST00000362104 92 ntBASIC3.52□□□□□ -1.85
PACSIN3Q9UKS6 Y_RNA.19-201ENST00000362462 99 ntBASIC3.52□□□□□ -1.85
PACSIN3Q9UKS6 RNA5SP97-201ENST00000365006 84 ntBASIC3.52□□□□□ -1.85
PACSIN3Q9UKS6 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.52□□□□□ -1.85
PACSIN3Q9UKS6 Y_RNA.577-201ENST00000384794 101 ntBASIC3.52□□□□□ -1.85
PACSIN3Q9UKS6 MIR124-3-201ENST00000384866 87 ntBASIC3.52□□□□□ -1.85
PACSIN3Q9UKS6 AL445529.1-201ENST00000398713 389 ntBASIC3.52□□□□□ -1.85
PACSIN3Q9UKS6 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.52□□□□□ -1.85
PACSIN3Q9UKS6 AL030996.1-201ENST00000411430 235 ntBASIC3.52□□□□□ -1.85
PACSIN3Q9UKS6 PPP1R11P2-201ENST00000423543 382 ntBASIC3.52□□□□□ -1.85
PACSIN3Q9UKS6 FTH1P6-201ENST00000430768 320 ntBASIC3.52□□□□□ -1.85
PACSIN3Q9UKS6 AC008264.1-201ENST00000447612 367 ntBASIC3.52□□□□□ -1.85
PACSIN3Q9UKS6 AL360271.2-201ENST00000447710 161 ntBASIC3.52□□□□□ -1.85
PACSIN3Q9UKS6 AL590664.1-201ENST00000448065 339 ntBASIC3.52□□□□□ -1.85
PACSIN3Q9UKS6 AC084357.1-201ENST00000473404 255 ntBASIC3.52□□□□□ -1.85
PACSIN3Q9UKS6 GZMAP1-201ENST00000503054 631 ntBASIC3.52□□□□□ -1.85
PACSIN3Q9UKS6 HMGB1P35-201ENST00000503360 598 ntBASIC3.52□□□□□ -1.85
PACSIN3Q9UKS6 RNU6-570P-201ENST00000517051 105 ntBASIC3.52□□□□□ -1.85
PACSIN3Q9UKS6 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.52□□□□□ -1.85
PACSIN3Q9UKS6 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PACSIN3Q9UKS6 OR5D17P-201ENST00000531492 978 ntBASIC3.52□□□□□ -1.85
PACSIN3Q9UKS6 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.52□□□□□ -1.85
PACSIN3Q9UKS6 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.52□□□□□ -1.85
PACSIN3Q9UKS6 AL160281.1-201ENST00000605307 311 ntBASIC3.52□□□□□ -1.85
PACSIN3Q9UKS6 MIR92B-201ENST00000607575 96 ntBASIC3.52□□□□□ -1.85
PACSIN3Q9UKS6 MIR1244-1-201ENST00000612829 85 ntBASIC3.52□□□□□ -1.85
PACSIN3Q9UKS6 AC006133.1-201ENST00000617106 264 ntBASIC3.52□□□□□ -1.85
PACSIN3Q9UKS6 AL031601.2-202ENST00000622650 282 ntBASIC3.52□□□□□ -1.85
PACSIN3Q9UKS6 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.52□□□□□ -1.85
PACSIN3Q9UKS6 MIR1244-3-201ENST00000635744 85 ntBASIC3.52□□□□□ -1.85
PACSIN3Q9UKS6 MIR1244-2-201ENST00000636449 85 ntBASIC3.52□□□□□ -1.85
PACSIN3Q9UKS6 MIR1244-4-202ENST00000636813 85 ntBASIC3.52□□□□□ -1.85
PACSIN3Q9UKS6 ZNF285B-201ENST00000561698 1767 ntBASIC3.52□□□□□ -1.85
PACSIN3Q9UKS6 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.52□□□□□ -1.85
PACSIN3Q9UKS6 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.52□□□□□ -1.85
PACSIN3Q9UKS6 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.52□□□□□ -1.85
PACSIN3Q9UKS6 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.51□□□□□ -1.85
PACSIN3Q9UKS6 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
PACSIN3Q9UKS6 RNY1P16-201ENST00000363063 111 ntBASIC3.51□□□□□ -1.85
PACSIN3Q9UKS6 RNU6-770P-201ENST00000363929 105 ntBASIC3.51□□□□□ -1.85
PACSIN3Q9UKS6 RNA5SP42-201ENST00000364278 115 ntBASIC3.51□□□□□ -1.85
PACSIN3Q9UKS6 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.51□□□□□ -1.85
PACSIN3Q9UKS6 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
PACSIN3Q9UKS6 Y_RNA.480-201ENST00000384364 102 ntBASIC3.51□□□□□ -1.85
PACSIN3Q9UKS6 RNU6-790P-201ENST00000384479 105 ntBASIC3.51□□□□□ -1.85
PACSIN3Q9UKS6 RNU6-1093P-201ENST00000391194 107 ntBASIC3.51□□□□□ -1.85
PACSIN3Q9UKS6 PTMAP2-201ENST00000397627 327 ntBASIC3.51□□□□□ -1.85
PACSIN3Q9UKS6 U3.42-201ENST00000408746 214 ntBASIC3.51□□□□□ -1.85
PACSIN3Q9UKS6 AC006989.1-201ENST00000427212 131 ntBASIC3.51□□□□□ -1.85
PACSIN3Q9UKS6 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.51□□□□□ -1.85
PACSIN3Q9UKS6 SNORD108-201ENST00000459332 71 ntBASIC3.51□□□□□ -1.85
PACSIN3Q9UKS6 RPL39P38-201ENST00000467018 153 ntBASIC3.51□□□□□ -1.85
PACSIN3Q9UKS6 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PACSIN3Q9UKS6 AC113155.1-201ENST00000511141 769 ntBASIC3.51□□□□□ -1.85
PACSIN3Q9UKS6 RNU6-138P-201ENST00000515952 107 ntBASIC3.51□□□□□ -1.85
PACSIN3Q9UKS6 SNORA31.3-201ENST00000516029 96 ntBASIC3.51□□□□□ -1.85
PACSIN3Q9UKS6 RNU6-1095P-201ENST00000516148 108 ntBASIC3.51□□□□□ -1.85
PACSIN3Q9UKS6 RNU6-897P-201ENST00000517135 105 ntBASIC3.51□□□□□ -1.85
PACSIN3Q9UKS6 RN7SKP258-201ENST00000517151 304 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms