Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.67□□□□□ -1.98
CLIP2Q9UDT6 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
CLIP2Q9UDT6 AC007336.1-201ENST00000576365 3828 ntBASIC2.67□□□□□ -1.98
CLIP2Q9UDT6 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CLIP2Q9UDT6 FGF7P2-201ENST00000332473 296 ntBASIC2.67□□□□□ -1.98
CLIP2Q9UDT6 Y_RNA.46-201ENST00000362695 102 ntBASIC2.67□□□□□ -1.98
CLIP2Q9UDT6 RNU1-52P-201ENST00000384190 164 ntBASIC2.67□□□□□ -1.98
CLIP2Q9UDT6 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.67□□□□□ -1.98
CLIP2Q9UDT6 AC023141.4-201ENST00000412031 328 ntBASIC2.67□□□□□ -1.98
CLIP2Q9UDT6 NDUFS5P4-201ENST00000412983 318 ntBASIC2.67□□□□□ -1.98
CLIP2Q9UDT6 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.67□□□□□ -1.98
CLIP2Q9UDT6 HMGB1P9-201ENST00000429856 646 ntBASIC2.67□□□□□ -1.98
CLIP2Q9UDT6 AL365184.2-201ENST00000431139 435 ntBASIC2.67□□□□□ -1.98
CLIP2Q9UDT6 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.67□□□□□ -1.98
CLIP2Q9UDT6 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.67□□□□□ -1.98
CLIP2Q9UDT6 TIMM9P1-201ENST00000436122 256 ntBASIC2.67□□□□□ -1.98
CLIP2Q9UDT6 AL121601.2-201ENST00000438019 707 ntBASIC2.67□□□□□ -1.98
CLIP2Q9UDT6 DNAJC19P4-201ENST00000440115 345 ntBASIC2.67□□□□□ -1.98
CLIP2Q9UDT6 DPPA3P1-201ENST00000448050 469 ntBASIC2.67□□□□□ -1.98
CLIP2Q9UDT6 AL513124.1-201ENST00000450410 614 ntBASIC2.67□□□□□ -1.98
CLIP2Q9UDT6 AL139109.1-201ENST00000455491 297 ntBASIC2.67□□□□□ -1.98
CLIP2Q9UDT6 AL121769.1-201ENST00000469473 401 ntBASIC2.67□□□□□ -1.98
CLIP2Q9UDT6 NDUFB4P2-201ENST00000509515 391 ntBASIC2.67□□□□□ -1.98
CLIP2Q9UDT6 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.67□□□□□ -1.98
CLIP2Q9UDT6 AC136619.2-201ENST00000563361 631 ntBASIC2.67□□□□□ -1.98
CLIP2Q9UDT6 AL356432.3-201ENST00000568952 465 ntBASIC2.67□□□□□ -1.98
CLIP2Q9UDT6 MIR5694-201ENST00000581190 76 ntBASIC2.67□□□□□ -1.98
CLIP2Q9UDT6 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.67□□□□□ -1.98
CLIP2Q9UDT6 AL161798.1-201ENST00000604630 131 ntBASIC2.67□□□□□ -1.98
CLIP2Q9UDT6 AC004805.2-201ENST00000605382 482 ntBASIC2.67□□□□□ -1.98
CLIP2Q9UDT6 LARP7P1-201ENST00000605576 316 ntBASIC2.67□□□□□ -1.98
CLIP2Q9UDT6 AL357078.3-201ENST00000607528 618 ntBASIC2.67□□□□□ -1.98
CLIP2Q9UDT6 AC090517.2-201ENST00000614966 680 ntBASIC2.67□□□□□ -1.98
CLIP2Q9UDT6 AL359314.1-201ENST00000616913 261 ntBASIC2.67□□□□□ -1.98
CLIP2Q9UDT6 AL136313.1-201ENST00000624804 202 ntBASIC2.67□□□□□ -1.98
CLIP2Q9UDT6 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
CLIP2Q9UDT6 OR4G2P-201ENST00000328113 903 ntBASIC2.66□□□□□ -1.98
CLIP2Q9UDT6 RNU5F-6P-201ENST00000362979 116 ntBASIC2.66□□□□□ -1.98
CLIP2Q9UDT6 Y_RNA.88-201ENST00000363029 99 ntBASIC2.66□□□□□ -1.98
CLIP2Q9UDT6 Y_RNA.97-201ENST00000363094 102 ntBASIC2.66□□□□□ -1.98
CLIP2Q9UDT6 Y_RNA.256-201ENST00000364594 104 ntBASIC2.66□□□□□ -1.98
CLIP2Q9UDT6 RNU6-259P-201ENST00000383999 107 ntBASIC2.66□□□□□ -1.98
CLIP2Q9UDT6 AL591416.1-201ENST00000404015 867 ntBASIC2.66□□□□□ -1.98
CLIP2Q9UDT6 RAP1BP3-201ENST00000407180 549 ntBASIC2.66□□□□□ -1.98
CLIP2Q9UDT6 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.66□□□□□ -1.98
CLIP2Q9UDT6 EIF1P1-201ENST00000421436 341 ntBASIC2.66□□□□□ -1.98
CLIP2Q9UDT6 BPY2DP-201ENST00000422208 265 ntBASIC2.66□□□□□ -1.98
CLIP2Q9UDT6 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.66□□□□□ -1.98
CLIP2Q9UDT6 ISCA1P1-201ENST00000426679 387 ntBASIC2.66□□□□□ -1.98
CLIP2Q9UDT6 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.66□□□□□ -1.98
CLIP2Q9UDT6 MTCO2P19-201ENST00000427513 598 ntBASIC2.66□□□□□ -1.98
CLIP2Q9UDT6 MTND1P2-201ENST00000430604 821 ntBASIC2.66□□□□□ -1.98
CLIP2Q9UDT6 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.66□□□□□ -1.98
CLIP2Q9UDT6 RPS15AP5-201ENST00000436276 388 ntBASIC2.66□□□□□ -1.98
CLIP2Q9UDT6 UBE2V1P8-201ENST00000437166 265 ntBASIC2.66□□□□□ -1.98
CLIP2Q9UDT6 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.66□□□□□ -1.98
CLIP2Q9UDT6 AC003071.1-201ENST00000451219 789 ntBASIC2.66□□□□□ -1.98
CLIP2Q9UDT6 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.66□□□□□ -1.98
CLIP2Q9UDT6 AC233279.1-201ENST00000455300 423 ntBASIC2.66□□□□□ -1.98
CLIP2Q9UDT6 AC107626.1-201ENST00000471084 183 ntBASIC2.66□□□□□ -1.98
CLIP2Q9UDT6 RPS29P20-201ENST00000489592 171 ntBASIC2.66□□□□□ -1.98
CLIP2Q9UDT6 RNU6-201P-201ENST00000517100 61 ntBASIC2.66□□□□□ -1.98
CLIP2Q9UDT6 SCARNA11.3-201ENST00000517276 130 ntBASIC2.66□□□□□ -1.98
CLIP2Q9UDT6 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.66□□□□□ -1.98
CLIP2Q9UDT6 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.66□□□□□ -1.98
CLIP2Q9UDT6 RPS3AP4-201ENST00000555161 764 ntBASIC2.66□□□□□ -1.98
CLIP2Q9UDT6 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.66□□□□□ -1.98
CLIP2Q9UDT6 AC105137.2-201ENST00000569073 466 ntBASIC2.66□□□□□ -1.98
CLIP2Q9UDT6 MIR1273D-201ENST00000577266 86 ntBASIC2.66□□□□□ -1.98
CLIP2Q9UDT6 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.66□□□□□ -1.98
CLIP2Q9UDT6 MIR4658-201ENST00000584344 65 ntBASIC2.66□□□□□ -1.98
CLIP2Q9UDT6 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.66□□□□□ -1.98
CLIP2Q9UDT6 KC877982.1-201ENST00000602313 470 ntBASIC2.66□□□□□ -1.98
CLIP2Q9UDT6 AC098826.3-201ENST00000603823 466 ntBASIC2.66□□□□□ -1.98
CLIP2Q9UDT6 AC090970.3-201ENST00000612566 866 ntBASIC2.66□□□□□ -1.98
CLIP2Q9UDT6 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.66□□□□□ -1.98
CLIP2Q9UDT6 MIR7515-201ENST00000637837 67 ntBASIC2.66□□□□□ -1.98
CLIP2Q9UDT6 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.66□□□□□ -1.98
CLIP2Q9UDT6 MTND5P26-201ENST00000426018 1752 ntBASIC2.66□□□□□ -1.98
CLIP2Q9UDT6 AC004520.1-201ENST00000608362 1413 ntBASIC2.66□□□□□ -1.98
CLIP2Q9UDT6 AC131280.1-202ENST00000624067 4211 ntBASIC2.65□□□□□ -1.98
CLIP2Q9UDT6 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
CLIP2Q9UDT6 RNU6-778P-201ENST00000363269 103 ntBASIC2.65□□□□□ -1.99
CLIP2Q9UDT6 MIR221-201ENST00000385135 110 ntBASIC2.65□□□□□ -1.99
CLIP2Q9UDT6 RNU6-780P-201ENST00000391030 104 ntBASIC2.65□□□□□ -1.99
CLIP2Q9UDT6 SNORD115-47-201ENST00000391226 86 ntBASIC2.65□□□□□ -1.99
CLIP2Q9UDT6 RN7SKP192-201ENST00000411291 327 ntBASIC2.65□□□□□ -1.99
CLIP2Q9UDT6 BTF3L4P3-201ENST00000418879 476 ntBASIC2.65□□□□□ -1.99
CLIP2Q9UDT6 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.65□□□□□ -1.99
CLIP2Q9UDT6 RPS27AP14-201ENST00000422868 454 ntBASIC2.65□□□□□ -1.99
CLIP2Q9UDT6 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.65□□□□□ -1.99
CLIP2Q9UDT6 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.65□□□□□ -1.99
CLIP2Q9UDT6 AC098831.1-201ENST00000440661 216 ntBASIC2.65□□□□□ -1.99
CLIP2Q9UDT6 FABP5P15-201ENST00000453566 214 ntBASIC2.65□□□□□ -1.99
CLIP2Q9UDT6 MTCO1P42-201ENST00000457379 726 ntBASIC2.65□□□□□ -1.99
CLIP2Q9UDT6 RNA5SP269-201ENST00000459032 137 ntBASIC2.65□□□□□ -1.99
CLIP2Q9UDT6 AC069439.1-201ENST00000494739 167 ntBASIC2.65□□□□□ -1.99
CLIP2Q9UDT6 RPS27AP10-201ENST00000496103 208 ntBASIC2.65□□□□□ -1.99
CLIP2Q9UDT6 AC026801.1-201ENST00000497178 464 ntBASIC2.65□□□□□ -1.99
CLIP2Q9UDT6 EIF4EP3-201ENST00000498782 656 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms