Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CLCF1Q9UBD9 AC023194.1-201ENST00000493084 308 ntBASIC1.97□□□□□ -2.09
CLCF1Q9UBD9 YWHAEP4-201ENST00000505390 198 ntBASIC1.97□□□□□ -2.09
CLCF1Q9UBD9 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CLCF1Q9UBD9 AC023141.11-201ENST00000508864 202 ntBASIC1.97□□□□□ -2.09
CLCF1Q9UBD9 AC108078.2-201ENST00000510750 236 ntBASIC1.97□□□□□ -2.09
CLCF1Q9UBD9 RNA5SP200-201ENST00000516360 103 ntBASIC1.97□□□□□ -2.09
CLCF1Q9UBD9 Vault.3-201ENST00000516676 95 ntBASIC1.97□□□□□ -2.09
CLCF1Q9UBD9 SCARNA3-201ENST00000517097 143 ntBASIC1.97□□□□□ -2.09
CLCF1Q9UBD9 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.97□□□□□ -2.09
CLCF1Q9UBD9 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.97□□□□□ -2.09
CLCF1Q9UBD9 AC121758.2-201ENST00000553271 193 ntBASIC1.97□□□□□ -2.09
CLCF1Q9UBD9 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.97□□□□□ -2.09
CLCF1Q9UBD9 MIR3199-1-201ENST00000582434 88 ntBASIC1.97□□□□□ -2.09
CLCF1Q9UBD9 MIR4765-201ENST00000585007 77 ntBASIC1.97□□□□□ -2.09
CLCF1Q9UBD9 MIR6895-201ENST00000613497 78 ntBASIC1.97□□□□□ -2.09
CLCF1Q9UBD9 AP001506.1-201ENST00000615444 211 ntBASIC1.97□□□□□ -2.09
CLCF1Q9UBD9 MIR6132-201ENST00000622083 109 ntBASIC1.97□□□□□ -2.09
CLCF1Q9UBD9 AC024940.5-201ENST00000622889 474 ntBASIC1.97□□□□□ -2.09
CLCF1Q9UBD9 AL160394.1-201ENST00000624765 724 ntBASIC1.97□□□□□ -2.09
CLCF1Q9UBD9 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CLCF1Q9UBD9 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CLCF1Q9UBD9 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC1.96□□□□□ -2.1
CLCF1Q9UBD9 AC103710.2-202ENST00000641454 2853 ntBASIC1.96□□□□□ -2.1
CLCF1Q9UBD9 AL139276.1-201ENST00000311910 1001 ntBASIC1.96□□□□□ -2.1
CLCF1Q9UBD9 RNU6-898P-201ENST00000365627 104 ntBASIC1.96□□□□□ -2.1
CLCF1Q9UBD9 OR5H15-201ENST00000383696 930 ntBASIC1.96□□□□□ -2.1
CLCF1Q9UBD9 RNU6-166P-201ENST00000384371 107 ntBASIC1.96□□□□□ -2.1
CLCF1Q9UBD9 RNU6-748P-201ENST00000384648 107 ntBASIC1.96□□□□□ -2.1
CLCF1Q9UBD9 RNY3P10-201ENST00000384764 102 ntBASIC1.96□□□□□ -2.1
CLCF1Q9UBD9 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.96□□□□□ -2.1
CLCF1Q9UBD9 AC009518.2-201ENST00000418056 731 ntBASIC1.96□□□□□ -2.1
CLCF1Q9UBD9 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.96□□□□□ -2.1
CLCF1Q9UBD9 AC073614.1-201ENST00000438690 650 ntBASIC1.96□□□□□ -2.1
CLCF1Q9UBD9 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.96□□□□□ -2.1
CLCF1Q9UBD9 SNRPGP9-201ENST00000456025 225 ntBASIC1.96□□□□□ -2.1
CLCF1Q9UBD9 RAP1BP2-201ENST00000478270 544 ntBASIC1.96□□□□□ -2.1
CLCF1Q9UBD9 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.96□□□□□ -2.1
CLCF1Q9UBD9 AC116655.1-201ENST00000508324 901 ntBASIC1.96□□□□□ -2.1
CLCF1Q9UBD9 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC1.96□□□□□ -2.1
CLCF1Q9UBD9 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.96□□□□□ -2.1
CLCF1Q9UBD9 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.96□□□□□ -2.1
CLCF1Q9UBD9 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.96□□□□□ -2.1
CLCF1Q9UBD9 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.96□□□□□ -2.1
CLCF1Q9UBD9 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.96□□□□□ -2.1
CLCF1Q9UBD9 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.96□□□□□ -2.1
CLCF1Q9UBD9 NRBF2P1-201ENST00000587407 859 ntBASIC1.96□□□□□ -2.1
CLCF1Q9UBD9 AC008121.1-201ENST00000603244 268 ntBASIC1.96□□□□□ -2.1
CLCF1Q9UBD9 AL022154.1-201ENST00000604698 785 ntBASIC1.96□□□□□ -2.1
CLCF1Q9UBD9 AC012409.4-201ENST00000612923 249 ntBASIC1.96□□□□□ -2.1
CLCF1Q9UBD9 AC019226.2-201ENST00000625973 424 ntBASIC1.96□□□□□ -2.1
CLCF1Q9UBD9 AL359854.1-201ENST00000614203 1594 ntBASIC1.96□□□□□ -2.1
CLCF1Q9UBD9 FARSBP1-201ENST00000435808 1778 ntBASIC1.95□□□□□ -2.1
CLCF1Q9UBD9 AL109809.4-201ENST00000603520 2185 ntBASIC1.95□□□□□ -2.1
CLCF1Q9UBD9 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.95□□□□□ -2.1
CLCF1Q9UBD9 FGF7P2-201ENST00000332473 296 ntBASIC1.95□□□□□ -2.1
CLCF1Q9UBD9 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CLCF1Q9UBD9 SNORA24.1-201ENST00000384401 135 ntBASIC1.95□□□□□ -2.1
CLCF1Q9UBD9 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CLCF1Q9UBD9 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CLCF1Q9UBD9 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.95□□□□□ -2.1
CLCF1Q9UBD9 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC1.95□□□□□ -2.1
CLCF1Q9UBD9 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.95□□□□□ -2.1
CLCF1Q9UBD9 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.95□□□□□ -2.1
CLCF1Q9UBD9 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.95□□□□□ -2.1
CLCF1Q9UBD9 AC010095.1-201ENST00000443543 144 ntBASIC1.95□□□□□ -2.1
CLCF1Q9UBD9 AC011753.1-201ENST00000451001 220 ntBASIC1.95□□□□□ -2.1
CLCF1Q9UBD9 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.95□□□□□ -2.1
CLCF1Q9UBD9 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.95□□□□□ -2.1
CLCF1Q9UBD9 RNU6-123P-201ENST00000516163 102 ntBASIC1.95□□□□□ -2.1
CLCF1Q9UBD9 SCARNA16.3-201ENST00000516595 184 ntBASIC1.95□□□□□ -2.1
CLCF1Q9UBD9 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.95□□□□□ -2.1
CLCF1Q9UBD9 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.95□□□□□ -2.1
CLCF1Q9UBD9 AC087883.1-201ENST00000551882 391 ntBASIC1.95□□□□□ -2.1
CLCF1Q9UBD9 AC023824.2-201ENST00000566185 400 ntBASIC1.95□□□□□ -2.1
CLCF1Q9UBD9 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.95□□□□□ -2.1
CLCF1Q9UBD9 AC137800.2-201ENST00000574375 120 ntBASIC1.95□□□□□ -2.1
CLCF1Q9UBD9 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.95□□□□□ -2.1
CLCF1Q9UBD9 AL021997.1-201ENST00000605757 193 ntBASIC1.95□□□□□ -2.1
CLCF1Q9UBD9 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.95□□□□□ -2.1
CLCF1Q9UBD9 AC010678.1-201ENST00000614118 713 ntBASIC1.95□□□□□ -2.1
CLCF1Q9UBD9 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
CLCF1Q9UBD9 AC110994.2-201ENST00000635481 492 ntBASIC1.95□□□□□ -2.1
CLCF1Q9UBD9 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.95□□□□□ -2.1
CLCF1Q9UBD9 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CLCF1Q9UBD9 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CLCF1Q9UBD9 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CLCF1Q9UBD9 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.95□□□□□ -2.1
CLCF1Q9UBD9 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CLCF1Q9UBD9 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CLCF1Q9UBD9 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.94□□□□□ -2.1
CLCF1Q9UBD9 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CLCF1Q9UBD9 MIR412-201ENST00000362142 91 ntBASIC1.94□□□□□ -2.1
CLCF1Q9UBD9 Y_RNA.22-201ENST00000362492 102 ntBASIC1.94□□□□□ -2.1
CLCF1Q9UBD9 RNU6-486P-201ENST00000363116 107 ntBASIC1.94□□□□□ -2.1
CLCF1Q9UBD9 RNU6-169P-201ENST00000365336 107 ntBASIC1.94□□□□□ -2.1
CLCF1Q9UBD9 SNORA64-201ENST00000384674 134 ntBASIC1.94□□□□□ -2.1
CLCF1Q9UBD9 MIR218-1-201ENST00000384999 110 ntBASIC1.94□□□□□ -2.1
CLCF1Q9UBD9 MIR518D-201ENST00000385014 87 ntBASIC1.94□□□□□ -2.1
CLCF1Q9UBD9 RNU6-220P-201ENST00000390919 107 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms