Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 AL118558.2-201ENST00000556294 238 ntBASIC3.02□□□□□ -1.93
HCN3Q9P1Z3 LRRC37A5P-203ENST00000580181 585 ntBASIC3.02□□□□□ -1.93
HCN3Q9P1Z3 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.02□□□□□ -1.93
HCN3Q9P1Z3 AC092747.3-201ENST00000603769 301 ntBASIC3.02□□□□□ -1.93
HCN3Q9P1Z3 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.02□□□□□ -1.93
HCN3Q9P1Z3 AC002044.1-201ENST00000606707 158 ntBASIC3.02□□□□□ -1.93
HCN3Q9P1Z3 AC104458.1-201ENST00000608243 463 ntBASIC3.02□□□□□ -1.93
HCN3Q9P1Z3 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.02□□□□□ -1.93
HCN3Q9P1Z3 AC004944.1-201ENST00000517807 3059 ntBASIC3.02□□□□□ -1.93
HCN3Q9P1Z3 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HCN3Q9P1Z3 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.02□□□□□ -1.93
HCN3Q9P1Z3 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.02□□□□□ -1.93
HCN3Q9P1Z3 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.01□□□□□ -1.93
HCN3Q9P1Z3 MAPK10-362ENST00000641864 4484 ntBASIC3.01□□□□□ -1.93
HCN3Q9P1Z3 RNA5SP374-201ENST00000362939 125 ntBASIC3.01□□□□□ -1.93
HCN3Q9P1Z3 Y_RNA.324-201ENST00000365165 102 ntBASIC3.01□□□□□ -1.93
HCN3Q9P1Z3 Y_RNA.480-201ENST00000384364 102 ntBASIC3.01□□□□□ -1.93
HCN3Q9P1Z3 RNU6-750P-201ENST00000390946 107 ntBASIC3.01□□□□□ -1.93
HCN3Q9P1Z3 RNU2-3P-201ENST00000410144 191 ntBASIC3.01□□□□□ -1.93
HCN3Q9P1Z3 RNU4-47P-201ENST00000410876 114 ntBASIC3.01□□□□□ -1.93
HCN3Q9P1Z3 POLHP1-201ENST00000411806 470 ntBASIC3.01□□□□□ -1.93
HCN3Q9P1Z3 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.01□□□□□ -1.93
HCN3Q9P1Z3 CYCSP33-201ENST00000414485 327 ntBASIC3.01□□□□□ -1.93
HCN3Q9P1Z3 SNRPEP10-201ENST00000420249 274 ntBASIC3.01□□□□□ -1.93
HCN3Q9P1Z3 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.01□□□□□ -1.93
HCN3Q9P1Z3 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.01□□□□□ -1.93
HCN3Q9P1Z3 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.01□□□□□ -1.93
HCN3Q9P1Z3 ERLEC1P1-201ENST00000433806 578 ntBASIC3.01□□□□□ -1.93
HCN3Q9P1Z3 AC009296.1-201ENST00000443146 155 ntBASIC3.01□□□□□ -1.93
HCN3Q9P1Z3 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.01□□□□□ -1.93
HCN3Q9P1Z3 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.01□□□□□ -1.93
HCN3Q9P1Z3 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.01□□□□□ -1.93
HCN3Q9P1Z3 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.01□□□□□ -1.93
HCN3Q9P1Z3 AC116655.1-201ENST00000508324 901 ntBASIC3.01□□□□□ -1.93
HCN3Q9P1Z3 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.01□□□□□ -1.93
HCN3Q9P1Z3 AC114781.4-201ENST00000513707 639 ntBASIC3.01□□□□□ -1.93
HCN3Q9P1Z3 YPEL5P2-201ENST00000605553 359 ntBASIC3.01□□□□□ -1.93
HCN3Q9P1Z3 RNU6-89P-201ENST00000606519 100 ntBASIC3.01□□□□□ -1.93
HCN3Q9P1Z3 AC092807.2-201ENST00000609367 243 ntBASIC3.01□□□□□ -1.93
HCN3Q9P1Z3 RMST_3.1-201ENST00000611651 109 ntBASIC3.01□□□□□ -1.93
HCN3Q9P1Z3 RMST_4.1-201ENST00000616886 107 ntBASIC3.01□□□□□ -1.93
HCN3Q9P1Z3 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.01□□□□□ -1.93
HCN3Q9P1Z3 AC009487.2-201ENST00000420969 6821 ntBASIC3□□□□□ -1.93
HCN3Q9P1Z3 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3□□□□□ -1.93
HCN3Q9P1Z3 RNU6-858P-201ENST00000362436 107 ntBASIC3□□□□□ -1.93
HCN3Q9P1Z3 Y_RNA.248-201ENST00000364501 109 ntBASIC3□□□□□ -1.93
HCN3Q9P1Z3 Y_RNA.373-201ENST00000365600 103 ntBASIC3□□□□□ -1.93
HCN3Q9P1Z3 MIR518D-201ENST00000385014 87 ntBASIC3□□□□□ -1.93
HCN3Q9P1Z3 U3.37-201ENST00000408528 213 ntBASIC3□□□□□ -1.93
HCN3Q9P1Z3 ARL5AP1-201ENST00000418991 388 ntBASIC3□□□□□ -1.93
HCN3Q9P1Z3 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3□□□□□ -1.93
HCN3Q9P1Z3 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3□□□□□ -1.93
HCN3Q9P1Z3 CALM1P1-201ENST00000442082 433 ntBASIC3□□□□□ -1.93
HCN3Q9P1Z3 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3□□□□□ -1.93
HCN3Q9P1Z3 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3□□□□□ -1.93
HCN3Q9P1Z3 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3□□□□□ -1.93
HCN3Q9P1Z3 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3□□□□□ -1.93
HCN3Q9P1Z3 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3□□□□□ -1.93
HCN3Q9P1Z3 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3□□□□□ -1.93
HCN3Q9P1Z3 HIGD1AP13-201ENST00000509878 289 ntBASIC3□□□□□ -1.93
HCN3Q9P1Z3 MRPS36P2-201ENST00000512569 299 ntBASIC3□□□□□ -1.93
HCN3Q9P1Z3 RNU6-189P-201ENST00000516120 101 ntBASIC3□□□□□ -1.93
HCN3Q9P1Z3 Y_RNA.687-201ENST00000516558 91 ntBASIC3□□□□□ -1.93
HCN3Q9P1Z3 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3□□□□□ -1.93
HCN3Q9P1Z3 AC078814.3-201ENST00000553036 491 ntBASIC3□□□□□ -1.93
HCN3Q9P1Z3 OR11H5P-201ENST00000554039 926 ntBASIC3□□□□□ -1.93
HCN3Q9P1Z3 AC007151.1-201ENST00000572774 483 ntBASIC3□□□□□ -1.93
HCN3Q9P1Z3 SNORA59B-202ENST00000578183 701 ntBASIC3□□□□□ -1.93
HCN3Q9P1Z3 AC012493.2-201ENST00000595083 291 ntBASIC3□□□□□ -1.93
HCN3Q9P1Z3 VN1R80P-201ENST00000597126 338 ntBASIC3□□□□□ -1.93
HCN3Q9P1Z3 AC005000.2-201ENST00000605468 310 ntBASIC3□□□□□ -1.93
HCN3Q9P1Z3 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3□□□□□ -1.93
HCN3Q9P1Z3 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3□□□□□ -1.93
HCN3Q9P1Z3 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
HCN3Q9P1Z3 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
HCN3Q9P1Z3 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3□□□□□ -1.93
HCN3Q9P1Z3 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3□□□□□ -1.93
HCN3Q9P1Z3 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3□□□□□ -1.93
HCN3Q9P1Z3 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
HCN3Q9P1Z3 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
HCN3Q9P1Z3 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
HCN3Q9P1Z3 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.99□□□□□ -1.93
HCN3Q9P1Z3 RNU6-266P-201ENST00000364225 107 ntBASIC2.99□□□□□ -1.93
HCN3Q9P1Z3 RNU6-72P-201ENST00000384285 79 ntBASIC2.99□□□□□ -1.93
HCN3Q9P1Z3 RNU6-19P-201ENST00000384718 107 ntBASIC2.99□□□□□ -1.93
HCN3Q9P1Z3 MIR514A2-201ENST00000385131 88 ntBASIC2.99□□□□□ -1.93
HCN3Q9P1Z3 MIR514A3-201ENST00000385132 88 ntBASIC2.99□□□□□ -1.93
HCN3Q9P1Z3 RNU6-332P-201ENST00000391193 108 ntBASIC2.99□□□□□ -1.93
HCN3Q9P1Z3 RNU4-26P-201ENST00000410270 107 ntBASIC2.99□□□□□ -1.93
HCN3Q9P1Z3 AC096649.2-201ENST00000416186 393 ntBASIC2.99□□□□□ -1.93
HCN3Q9P1Z3 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.99□□□□□ -1.93
HCN3Q9P1Z3 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.99□□□□□ -1.93
HCN3Q9P1Z3 AL353705.1-201ENST00000433468 480 ntBASIC2.99□□□□□ -1.93
HCN3Q9P1Z3 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.99□□□□□ -1.93
HCN3Q9P1Z3 HIGD1AP2-201ENST00000446367 280 ntBASIC2.99□□□□□ -1.93
HCN3Q9P1Z3 AC006445.1-201ENST00000491925 405 ntBASIC2.99□□□□□ -1.93
HCN3Q9P1Z3 Y_RNA.654-201ENST00000497848 106 ntBASIC2.99□□□□□ -1.93
HCN3Q9P1Z3 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.99□□□□□ -1.93
HCN3Q9P1Z3 AC113155.1-201ENST00000511141 769 ntBASIC2.99□□□□□ -1.93
HCN3Q9P1Z3 RNA5SP385-201ENST00000515947 110 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms