Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3□□□□□ -1.93
SMARCAL1Q9NZC9 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3□□□□□ -1.93
SMARCAL1Q9NZC9 SCOCP1-201ENST00000554676 349 ntBASIC3□□□□□ -1.93
SMARCAL1Q9NZC9 AC106782.4-201ENST00000568264 210 ntBASIC3□□□□□ -1.93
SMARCAL1Q9NZC9 MIR5195-201ENST00000583555 115 ntBASIC3□□□□□ -1.93
SMARCAL1Q9NZC9 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3□□□□□ -1.93
SMARCAL1Q9NZC9 AC012493.2-201ENST00000595083 291 ntBASIC3□□□□□ -1.93
SMARCAL1Q9NZC9 C8orf59P2-201ENST00000603441 271 ntBASIC3□□□□□ -1.93
SMARCAL1Q9NZC9 AC021646.1-201ENST00000605469 484 ntBASIC3□□□□□ -1.93
SMARCAL1Q9NZC9 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3□□□□□ -1.93
SMARCAL1Q9NZC9 AC090115.4-201ENST00000609970 188 ntBASIC3□□□□□ -1.93
SMARCAL1Q9NZC9 Z99571.1-201ENST00000636677 394 ntBASIC3□□□□□ -1.93
SMARCAL1Q9NZC9 AC112487.2-201ENST00000637950 304 ntBASIC3□□□□□ -1.93
SMARCAL1Q9NZC9 AC073346.2-201ENST00000624724 2058 ntBASIC3□□□□□ -1.93
SMARCAL1Q9NZC9 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3□□□□□ -1.93
SMARCAL1Q9NZC9 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
SMARCAL1Q9NZC9 AC092593.1-201ENST00000515413 1815 ntBASIC3□□□□□ -1.93
SMARCAL1Q9NZC9 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.99□□□□□ -1.93
SMARCAL1Q9NZC9 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.99□□□□□ -1.93
SMARCAL1Q9NZC9 AC092435.3-201ENST00000565538 3654 ntBASIC2.99□□□□□ -1.93
SMARCAL1Q9NZC9 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.99□□□□□ -1.93
SMARCAL1Q9NZC9 SNORA71.1-201ENST00000364523 117 ntBASIC2.99□□□□□ -1.93
SMARCAL1Q9NZC9 Y_RNA.356-201ENST00000365475 113 ntBASIC2.99□□□□□ -1.93
SMARCAL1Q9NZC9 SNORA70.4-201ENST00000365509 134 ntBASIC2.99□□□□□ -1.93
SMARCAL1Q9NZC9 CD24P4-201ENST00000382840 243 ntBASIC2.99□□□□□ -1.93
SMARCAL1Q9NZC9 RNU6-831P-201ENST00000384548 107 ntBASIC2.99□□□□□ -1.93
SMARCAL1Q9NZC9 Y_RNA.534-201ENST00000384599 112 ntBASIC2.99□□□□□ -1.93
SMARCAL1Q9NZC9 AL356432.1-201ENST00000405809 419 ntBASIC2.99□□□□□ -1.93
SMARCAL1Q9NZC9 RN7SKP220-201ENST00000410611 288 ntBASIC2.99□□□□□ -1.93
SMARCAL1Q9NZC9 AC080125.1-201ENST00000414888 684 ntBASIC2.99□□□□□ -1.93
SMARCAL1Q9NZC9 BX682237.1-201ENST00000415016 335 ntBASIC2.99□□□□□ -1.93
SMARCAL1Q9NZC9 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.99□□□□□ -1.93
SMARCAL1Q9NZC9 MTCO3P46-201ENST00000425787 232 ntBASIC2.99□□□□□ -1.93
SMARCAL1Q9NZC9 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.99□□□□□ -1.93
SMARCAL1Q9NZC9 AL669831.1-202ENST00000428504 417 ntBASIC2.99□□□□□ -1.93
SMARCAL1Q9NZC9 TAAR7P-201ENST00000436141 242 ntBASIC2.99□□□□□ -1.93
SMARCAL1Q9NZC9 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.99□□□□□ -1.93
SMARCAL1Q9NZC9 GTF2IP13-201ENST00000438487 386 ntBASIC2.99□□□□□ -1.93
SMARCAL1Q9NZC9 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.99□□□□□ -1.93
SMARCAL1Q9NZC9 RPS24P13-201ENST00000442520 397 ntBASIC2.99□□□□□ -1.93
SMARCAL1Q9NZC9 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.99□□□□□ -1.93
SMARCAL1Q9NZC9 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.99□□□□□ -1.93
SMARCAL1Q9NZC9 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.99□□□□□ -1.93
SMARCAL1Q9NZC9 Y_RNA.654-201ENST00000497848 106 ntBASIC2.99□□□□□ -1.93
SMARCAL1Q9NZC9 FAM206BP-201ENST00000510179 541 ntBASIC2.99□□□□□ -1.93
SMARCAL1Q9NZC9 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.99□□□□□ -1.93
SMARCAL1Q9NZC9 TBCAP3-201ENST00000512475 312 ntBASIC2.99□□□□□ -1.93
SMARCAL1Q9NZC9 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.99□□□□□ -1.93
SMARCAL1Q9NZC9 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.99□□□□□ -1.93
SMARCAL1Q9NZC9 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.99□□□□□ -1.93
SMARCAL1Q9NZC9 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.99□□□□□ -1.93
SMARCAL1Q9NZC9 AC087241.2-201ENST00000535801 324 ntBASIC2.99□□□□□ -1.93
SMARCAL1Q9NZC9 OR11H5P-201ENST00000554039 926 ntBASIC2.99□□□□□ -1.93
SMARCAL1Q9NZC9 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.99□□□□□ -1.93
SMARCAL1Q9NZC9 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SMARCAL1Q9NZC9 BNIP3P25-201ENST00000596023 559 ntBASIC2.99□□□□□ -1.93
SMARCAL1Q9NZC9 AC005261.5-201ENST00000596280 355 ntBASIC2.99□□□□□ -1.93
SMARCAL1Q9NZC9 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.99□□□□□ -1.93
SMARCAL1Q9NZC9 AC092747.3-201ENST00000603769 301 ntBASIC2.99□□□□□ -1.93
SMARCAL1Q9NZC9 AL161798.1-201ENST00000604630 131 ntBASIC2.99□□□□□ -1.93
SMARCAL1Q9NZC9 ATP1B3P1-201ENST00000605365 821 ntBASIC2.99□□□□□ -1.93
SMARCAL1Q9NZC9 AL442067.2-201ENST00000614033 363 ntBASIC2.99□□□□□ -1.93
SMARCAL1Q9NZC9 AC090617.7-201ENST00000623952 126 ntBASIC2.99□□□□□ -1.93
SMARCAL1Q9NZC9 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.99□□□□□ -1.93
SMARCAL1Q9NZC9 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SMARCAL1Q9NZC9 AC073544.1-201ENST00000600110 1595 ntBASIC2.99□□□□□ -1.93
SMARCAL1Q9NZC9 MTND4P29-201ENST00000503122 1372 ntBASIC2.99□□□□□ -1.93
SMARCAL1Q9NZC9 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.98□□□□□ -1.93
SMARCAL1Q9NZC9 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
SMARCAL1Q9NZC9 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SMARCAL1Q9NZC9 RNU6-1252P-201ENST00000363054 104 ntBASIC2.98□□□□□ -1.93
SMARCAL1Q9NZC9 Y_RNA.263-201ENST00000364659 114 ntBASIC2.98□□□□□ -1.93
SMARCAL1Q9NZC9 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SMARCAL1Q9NZC9 RNU6-393P-201ENST00000384475 107 ntBASIC2.98□□□□□ -1.93
SMARCAL1Q9NZC9 Y_RNA.529-201ENST00000384586 119 ntBASIC2.98□□□□□ -1.93
SMARCAL1Q9NZC9 RNA5SP219-201ENST00000390940 113 ntBASIC2.98□□□□□ -1.93
SMARCAL1Q9NZC9 RNU6-510P-201ENST00000391239 108 ntBASIC2.98□□□□□ -1.93
SMARCAL1Q9NZC9 AL122016.1-201ENST00000403365 367 ntBASIC2.98□□□□□ -1.93
SMARCAL1Q9NZC9 RPS4XP7-201ENST00000406274 780 ntBASIC2.98□□□□□ -1.93
SMARCAL1Q9NZC9 POLHP1-201ENST00000411806 470 ntBASIC2.98□□□□□ -1.93
SMARCAL1Q9NZC9 UBE2D3P2-201ENST00000424409 445 ntBASIC2.98□□□□□ -1.93
SMARCAL1Q9NZC9 SAR1AP4-201ENST00000429225 591 ntBASIC2.98□□□□□ -1.93
SMARCAL1Q9NZC9 AL356867.1-201ENST00000429623 299 ntBASIC2.98□□□□□ -1.93
SMARCAL1Q9NZC9 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.98□□□□□ -1.93
SMARCAL1Q9NZC9 RPL23AP83-201ENST00000434984 473 ntBASIC2.98□□□□□ -1.93
SMARCAL1Q9NZC9 PIGFP3-201ENST00000441918 722 ntBASIC2.98□□□□□ -1.93
SMARCAL1Q9NZC9 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.98□□□□□ -1.93
SMARCAL1Q9NZC9 GSTA11P-201ENST00000452866 669 ntBASIC2.98□□□□□ -1.93
SMARCAL1Q9NZC9 DYNLL1P5-201ENST00000467158 270 ntBASIC2.98□□□□□ -1.93
SMARCAL1Q9NZC9 RPS20P22-201ENST00000473700 357 ntBASIC2.98□□□□□ -1.93
SMARCAL1Q9NZC9 TRBV1-201ENST00000476502 284 ntBASIC2.98□□□□□ -1.93
SMARCAL1Q9NZC9 KC877373.1-201ENST00000479066 408 ntBASIC2.98□□□□□ -1.93
SMARCAL1Q9NZC9 RN7SL499P-201ENST00000481141 276 ntBASIC2.98□□□□□ -1.93
SMARCAL1Q9NZC9 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.98□□□□□ -1.93
SMARCAL1Q9NZC9 AC103851.1-201ENST00000506833 274 ntBASIC2.98□□□□□ -1.93
SMARCAL1Q9NZC9 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.98□□□□□ -1.93
SMARCAL1Q9NZC9 RN7SKP57-201ENST00000517248 293 ntBASIC2.98□□□□□ -1.93
SMARCAL1Q9NZC9 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.98□□□□□ -1.93
SMARCAL1Q9NZC9 AC107016.2-201ENST00000547968 190 ntBASIC2.98□□□□□ -1.93
SMARCAL1Q9NZC9 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms