Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 MIR6500-201ENST00000622700 86 ntBASIC3.62□□□□□ -1.83
MKS1Q9NXB0 MTND4LP32-201ENST00000636111 270 ntBASIC3.62□□□□□ -1.83
MKS1Q9NXB0 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.62□□□□□ -1.83
MKS1Q9NXB0 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
MKS1Q9NXB0 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
MKS1Q9NXB0 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
MKS1Q9NXB0 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
MKS1Q9NXB0 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
MKS1Q9NXB0 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.61□□□□□ -1.83
MKS1Q9NXB0 RNU6-428P-201ENST00000362942 107 ntBASIC3.61□□□□□ -1.83
MKS1Q9NXB0 RNU4-76P-201ENST00000364509 141 ntBASIC3.61□□□□□ -1.83
MKS1Q9NXB0 Y_RNA.259-201ENST00000364619 101 ntBASIC3.61□□□□□ -1.83
MKS1Q9NXB0 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
MKS1Q9NXB0 RNU6-213P-201ENST00000384051 104 ntBASIC3.61□□□□□ -1.83
MKS1Q9NXB0 RNU1-101P-201ENST00000391171 127 ntBASIC3.61□□□□□ -1.83
MKS1Q9NXB0 RPL31P12-201ENST00000422587 358 ntBASIC3.61□□□□□ -1.83
MKS1Q9NXB0 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.61□□□□□ -1.83
MKS1Q9NXB0 NIPA2P5-201ENST00000452282 464 ntBASIC3.61□□□□□ -1.83
MKS1Q9NXB0 RPS4XP2-201ENST00000458402 793 ntBASIC3.61□□□□□ -1.83
MKS1Q9NXB0 AC018437.1-201ENST00000492214 406 ntBASIC3.61□□□□□ -1.83
MKS1Q9NXB0 HMGN1P13-201ENST00000505795 138 ntBASIC3.61□□□□□ -1.83
MKS1Q9NXB0 MTCYBP40-201ENST00000509390 1135 ntBASIC3.61□□□□□ -1.83
MKS1Q9NXB0 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.61□□□□□ -1.83
MKS1Q9NXB0 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.61□□□□□ -1.83
MKS1Q9NXB0 AC022634.1-201ENST00000520765 532 ntBASIC3.61□□□□□ -1.83
MKS1Q9NXB0 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
MKS1Q9NXB0 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
MKS1Q9NXB0 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.61□□□□□ -1.83
MKS1Q9NXB0 APOOP3-201ENST00000536787 586 ntBASIC3.61□□□□□ -1.83
MKS1Q9NXB0 AC025884.1-201ENST00000556034 378 ntBASIC3.61□□□□□ -1.83
MKS1Q9NXB0 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.61□□□□□ -1.83
MKS1Q9NXB0 AL133393.1-201ENST00000603277 287 ntBASIC3.61□□□□□ -1.83
MKS1Q9NXB0 AC009314.1-201ENST00000603871 304 ntBASIC3.61□□□□□ -1.83
MKS1Q9NXB0 RNU1-30P-201ENST00000606575 163 ntBASIC3.61□□□□□ -1.83
MKS1Q9NXB0 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.61□□□□□ -1.83
MKS1Q9NXB0 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
MKS1Q9NXB0 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.61□□□□□ -1.83
MKS1Q9NXB0 PWAR6-201ENST00000552334 4618 ntBASIC3.61□□□□□ -1.83
MKS1Q9NXB0 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
MKS1Q9NXB0 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
MKS1Q9NXB0 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
MKS1Q9NXB0 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
MKS1Q9NXB0 SNORD116-29-201ENST00000384516 83 ntBASIC3.6□□□□□ -1.83
MKS1Q9NXB0 RNU6-306P-201ENST00000384617 107 ntBASIC3.6□□□□□ -1.83
MKS1Q9NXB0 RNU6-325P-201ENST00000411132 105 ntBASIC3.6□□□□□ -1.83
MKS1Q9NXB0 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.6□□□□□ -1.83
MKS1Q9NXB0 MTCO2P27-201ENST00000420740 428 ntBASIC3.6□□□□□ -1.83
MKS1Q9NXB0 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.6□□□□□ -1.83
MKS1Q9NXB0 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.6□□□□□ -1.83
MKS1Q9NXB0 C4BPAP2-201ENST00000428434 478 ntBASIC3.6□□□□□ -1.83
MKS1Q9NXB0 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.6□□□□□ -1.83
MKS1Q9NXB0 AC092185.1-201ENST00000491371 97 ntBASIC3.6□□□□□ -1.83
MKS1Q9NXB0 AK3P2-201ENST00000507976 429 ntBASIC3.6□□□□□ -1.83
MKS1Q9NXB0 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.6□□□□□ -1.83
MKS1Q9NXB0 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.6□□□□□ -1.83
MKS1Q9NXB0 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.6□□□□□ -1.83
MKS1Q9NXB0 Y_RNA.718-201ENST00000517110 102 ntBASIC3.6□□□□□ -1.83
MKS1Q9NXB0 NDUFB9P3-201ENST00000521269 501 ntBASIC3.6□□□□□ -1.83
MKS1Q9NXB0 AC120057.2-201ENST00000571520 271 ntBASIC3.6□□□□□ -1.83
MKS1Q9NXB0 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.6□□□□□ -1.83
MKS1Q9NXB0 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.6□□□□□ -1.83
MKS1Q9NXB0 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.6□□□□□ -1.83
MKS1Q9NXB0 MIR4719-201ENST00000585233 84 ntBASIC3.6□□□□□ -1.83
MKS1Q9NXB0 AC124303.1-201ENST00000605703 360 ntBASIC3.6□□□□□ -1.83
MKS1Q9NXB0 AC019193.3-201ENST00000609144 554 ntBASIC3.6□□□□□ -1.83
MKS1Q9NXB0 AL591516.1-201ENST00000611326 274 ntBASIC3.6□□□□□ -1.83
MKS1Q9NXB0 AC126177.8-201ENST00000618339 1015 ntBASIC3.6□□□□□ -1.83
MKS1Q9NXB0 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.6□□□□□ -1.83
MKS1Q9NXB0 AC098657.3-201ENST00000620434 263 ntBASIC3.6□□□□□ -1.83
MKS1Q9NXB0 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.6□□□□□ -1.83
MKS1Q9NXB0 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.6□□□□□ -1.83
MKS1Q9NXB0 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
MKS1Q9NXB0 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.6□□□□□ -1.83
MKS1Q9NXB0 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
MKS1Q9NXB0 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.59□□□□□ -1.83
MKS1Q9NXB0 AC126755.2-208ENST00000327792 462 ntBASIC3.59□□□□□ -1.83
MKS1Q9NXB0 RPL9P7-201ENST00000330965 580 ntBASIC3.59□□□□□ -1.83
MKS1Q9NXB0 AC138969.1-213ENST00000331436 462 ntBASIC3.59□□□□□ -1.83
MKS1Q9NXB0 RNU1-75P-201ENST00000347264 129 ntBASIC3.59□□□□□ -1.83
MKS1Q9NXB0 MIR30E-201ENST00000362104 92 ntBASIC3.59□□□□□ -1.83
MKS1Q9NXB0 SNORA62-201ENST00000365493 153 ntBASIC3.59□□□□□ -1.83
MKS1Q9NXB0 Y_RNA.419-201ENST00000384041 102 ntBASIC3.59□□□□□ -1.83
MKS1Q9NXB0 Y_RNA.431-201ENST00000384086 102 ntBASIC3.59□□□□□ -1.83
MKS1Q9NXB0 MIR517A-201ENST00000385001 87 ntBASIC3.59□□□□□ -1.83
MKS1Q9NXB0 FTH1P15-201ENST00000406984 280 ntBASIC3.59□□□□□ -1.83
MKS1Q9NXB0 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.59□□□□□ -1.83
MKS1Q9NXB0 AL365496.1-201ENST00000426885 215 ntBASIC3.59□□□□□ -1.83
MKS1Q9NXB0 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.59□□□□□ -1.83
MKS1Q9NXB0 BX679664.1-201ENST00000434429 253 ntBASIC3.59□□□□□ -1.83
MKS1Q9NXB0 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.59□□□□□ -1.83
MKS1Q9NXB0 AL513043.1-201ENST00000439124 535 ntBASIC3.59□□□□□ -1.83
MKS1Q9NXB0 NOTCH2P1-201ENST00000443481 624 ntBASIC3.59□□□□□ -1.83
MKS1Q9NXB0 TPT1P12-201ENST00000448968 492 ntBASIC3.59□□□□□ -1.83
MKS1Q9NXB0 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.59□□□□□ -1.83
MKS1Q9NXB0 PCMTD1P1-201ENST00000455560 355 ntBASIC3.59□□□□□ -1.83
MKS1Q9NXB0 RPL9P9-202ENST00000466501 579 ntBASIC3.59□□□□□ -1.83
MKS1Q9NXB0 MRPL42P6-201ENST00000486397 371 ntBASIC3.59□□□□□ -1.83
MKS1Q9NXB0 AC026782.1-201ENST00000512952 449 ntBASIC3.59□□□□□ -1.83
MKS1Q9NXB0 RN7SKP122-201ENST00000515923 296 ntBASIC3.59□□□□□ -1.83
MKS1Q9NXB0 RNU2-27P-201ENST00000516185 142 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms