Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.83□□□□□ -1.64
CUEDC1Q9NWM3 RPL23AP3-201ENST00000453844 468 ntBASIC4.83□□□□□ -1.64
CUEDC1Q9NWM3 RPL23AP49-201ENST00000492925 468 ntBASIC4.83□□□□□ -1.64
CUEDC1Q9NWM3 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.83□□□□□ -1.64
CUEDC1Q9NWM3 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.83□□□□□ -1.64
CUEDC1Q9NWM3 AC136624.4-201ENST00000573044 370 ntBASIC4.83□□□□□ -1.64
CUEDC1Q9NWM3 MIR4782-201ENST00000577987 79 ntBASIC4.83□□□□□ -1.64
CUEDC1Q9NWM3 MIR4431-201ENST00000579990 94 ntBASIC4.83□□□□□ -1.64
CUEDC1Q9NWM3 MIR4270-201ENST00000581799 70 ntBASIC4.83□□□□□ -1.64
CUEDC1Q9NWM3 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.83□□□□□ -1.64
CUEDC1Q9NWM3 DNAJC19P2-201ENST00000593340 302 ntBASIC4.83□□□□□ -1.64
CUEDC1Q9NWM3 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.83□□□□□ -1.64
CUEDC1Q9NWM3 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.83□□□□□ -1.64
CUEDC1Q9NWM3 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CUEDC1Q9NWM3 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CUEDC1Q9NWM3 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CUEDC1Q9NWM3 AC092593.1-201ENST00000515413 1815 ntBASIC4.83□□□□□ -1.64
CUEDC1Q9NWM3 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CUEDC1Q9NWM3 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.82□□□□□ -1.64
CUEDC1Q9NWM3 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.82□□□□□ -1.64
CUEDC1Q9NWM3 AC110491.1-201ENST00000562191 2010 ntBASIC4.82□□□□□ -1.64
CUEDC1Q9NWM3 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
CUEDC1Q9NWM3 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CUEDC1Q9NWM3 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CUEDC1Q9NWM3 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CUEDC1Q9NWM3 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
CUEDC1Q9NWM3 RNU6-961P-201ENST00000363893 105 ntBASIC4.82□□□□□ -1.64
CUEDC1Q9NWM3 SNORA70.2-201ENST00000364506 135 ntBASIC4.82□□□□□ -1.64
CUEDC1Q9NWM3 Y_RNA.309-201ENST00000365046 111 ntBASIC4.82□□□□□ -1.64
CUEDC1Q9NWM3 RNU6-281P-201ENST00000384212 103 ntBASIC4.82□□□□□ -1.64
CUEDC1Q9NWM3 RNU6-1145P-201ENST00000384246 107 ntBASIC4.82□□□□□ -1.64
CUEDC1Q9NWM3 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CUEDC1Q9NWM3 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CUEDC1Q9NWM3 RNU6-1064P-201ENST00000410626 104 ntBASIC4.82□□□□□ -1.64
CUEDC1Q9NWM3 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.82□□□□□ -1.64
CUEDC1Q9NWM3 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC4.82□□□□□ -1.64
CUEDC1Q9NWM3 CYP4F29P-201ENST00000420685 446 ntBASIC4.82□□□□□ -1.64
CUEDC1Q9NWM3 NDUFB4P7-201ENST00000423198 363 ntBASIC4.82□□□□□ -1.64
CUEDC1Q9NWM3 AC007919.1-201ENST00000429380 217 ntBASIC4.82□□□□□ -1.64
CUEDC1Q9NWM3 COX6B1P7-201ENST00000430845 235 ntBASIC4.82□□□□□ -1.64
CUEDC1Q9NWM3 AL512844.2-201ENST00000433990 593 ntBASIC4.82□□□□□ -1.64
CUEDC1Q9NWM3 AL450023.3-201ENST00000440592 271 ntBASIC4.82□□□□□ -1.64
CUEDC1Q9NWM3 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.82□□□□□ -1.64
CUEDC1Q9NWM3 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC4.82□□□□□ -1.64
CUEDC1Q9NWM3 snoU13.20-201ENST00000459180 104 ntBASIC4.82□□□□□ -1.64
CUEDC1Q9NWM3 RN7SL244P-201ENST00000493405 297 ntBASIC4.82□□□□□ -1.64
CUEDC1Q9NWM3 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.82□□□□□ -1.64
CUEDC1Q9NWM3 RNU6-191P-201ENST00000516295 94 ntBASIC4.82□□□□□ -1.64
CUEDC1Q9NWM3 RNA5SP165-201ENST00000517142 115 ntBASIC4.82□□□□□ -1.64
CUEDC1Q9NWM3 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.82□□□□□ -1.64
CUEDC1Q9NWM3 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.82□□□□□ -1.64
CUEDC1Q9NWM3 AC006349.1-201ENST00000555526 235 ntBASIC4.82□□□□□ -1.64
CUEDC1Q9NWM3 HSPE1P5-201ENST00000561489 272 ntBASIC4.82□□□□□ -1.64
CUEDC1Q9NWM3 MIR3613-201ENST00000579844 87 ntBASIC4.82□□□□□ -1.64
CUEDC1Q9NWM3 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.82□□□□□ -1.64
CUEDC1Q9NWM3 MUC2-202ENST00000613187 4845 ntBASIC4.82□□□□□ -1.64
CUEDC1Q9NWM3 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.82□□□□□ -1.64
CUEDC1Q9NWM3 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CUEDC1Q9NWM3 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CUEDC1Q9NWM3 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.82□□□□□ -1.64
CUEDC1Q9NWM3 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CUEDC1Q9NWM3 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CUEDC1Q9NWM3 AC008079.2-201ENST00000623543 20396 ntBASIC4.82□□□□□ -1.64
CUEDC1Q9NWM3 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.82□□□□□ -1.64
CUEDC1Q9NWM3 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CUEDC1Q9NWM3 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CUEDC1Q9NWM3 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.81□□□□□ -1.64
CUEDC1Q9NWM3 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CUEDC1Q9NWM3 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CUEDC1Q9NWM3 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CUEDC1Q9NWM3 MAPK10-263ENST00000641052 4307 ntBASIC4.81□□□□□ -1.64
CUEDC1Q9NWM3 RNU6-1272P-201ENST00000362776 107 ntBASIC4.81□□□□□ -1.64
CUEDC1Q9NWM3 RNU6-755P-201ENST00000364400 103 ntBASIC4.81□□□□□ -1.64
CUEDC1Q9NWM3 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.81□□□□□ -1.64
CUEDC1Q9NWM3 MIR1271-201ENST00000408537 86 ntBASIC4.81□□□□□ -1.64
CUEDC1Q9NWM3 AC009237.8-201ENST00000445492 379 ntBASIC4.81□□□□□ -1.64
CUEDC1Q9NWM3 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.81□□□□□ -1.64
CUEDC1Q9NWM3 RPS17P2-201ENST00000461663 408 ntBASIC4.81□□□□□ -1.64
CUEDC1Q9NWM3 RN7SL817P-201ENST00000480777 288 ntBASIC4.81□□□□□ -1.64
CUEDC1Q9NWM3 Y_RNA.797-201ENST00000515977 94 ntBASIC4.81□□□□□ -1.64
CUEDC1Q9NWM3 RNU6-659P-201ENST00000516454 104 ntBASIC4.81□□□□□ -1.64
CUEDC1Q9NWM3 IGKV1-32-201ENST00000519290 311 ntBASIC4.81□□□□□ -1.64
CUEDC1Q9NWM3 AL110118.1-201ENST00000553543 400 ntBASIC4.81□□□□□ -1.64
CUEDC1Q9NWM3 AL391261.3-201ENST00000557194 520 ntBASIC4.81□□□□□ -1.64
CUEDC1Q9NWM3 AC127455.1-201ENST00000565496 145 ntBASIC4.81□□□□□ -1.64
CUEDC1Q9NWM3 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.81□□□□□ -1.64
CUEDC1Q9NWM3 AC008745.1-201ENST00000604064 271 ntBASIC4.81□□□□□ -1.64
CUEDC1Q9NWM3 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.81□□□□□ -1.64
CUEDC1Q9NWM3 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.81□□□□□ -1.64
CUEDC1Q9NWM3 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
CUEDC1Q9NWM3 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CUEDC1Q9NWM3 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CUEDC1Q9NWM3 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CUEDC1Q9NWM3 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CUEDC1Q9NWM3 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.81□□□□□ -1.64
CUEDC1Q9NWM3 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CUEDC1Q9NWM3 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.8□□□□□ -1.64
CUEDC1Q9NWM3 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CUEDC1Q9NWM3 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CUEDC1Q9NWM3 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms