Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 AC097372.5-201ENST00000623665 376 ntBASIC3.4□□□□□ -1.87
RLIMQ9NVW2 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.4□□□□□ -1.87
RLIMQ9NVW2 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
RLIMQ9NVW2 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.4□□□□□ -1.87
RLIMQ9NVW2 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RLIMQ9NVW2 AC007656.2-201ENST00000624902 4547 ntBASIC3.4□□□□□ -1.87
RLIMQ9NVW2 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.4□□□□□ -1.87
RLIMQ9NVW2 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RLIMQ9NVW2 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
RLIMQ9NVW2 AC007256.1-201ENST00000392253 2765 ntBASIC3.4□□□□□ -1.87
RLIMQ9NVW2 ADAM3A-203ENST00000461344 2157 ntBASIC3.39□□□□□ -1.87
RLIMQ9NVW2 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
RLIMQ9NVW2 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RLIMQ9NVW2 RNA5SP42-201ENST00000364278 115 ntBASIC3.39□□□□□ -1.87
RLIMQ9NVW2 MIR184-201ENST00000384962 84 ntBASIC3.39□□□□□ -1.87
RLIMQ9NVW2 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
RLIMQ9NVW2 SNORA75.6-201ENST00000391318 127 ntBASIC3.39□□□□□ -1.87
RLIMQ9NVW2 NDUFS5P4-201ENST00000412983 318 ntBASIC3.39□□□□□ -1.87
RLIMQ9NVW2 AL591419.1-201ENST00000427423 339 ntBASIC3.39□□□□□ -1.87
RLIMQ9NVW2 MTND3P9-201ENST00000429526 346 ntBASIC3.39□□□□□ -1.87
RLIMQ9NVW2 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.39□□□□□ -1.87
RLIMQ9NVW2 RPS29P7-201ENST00000439662 171 ntBASIC3.39□□□□□ -1.87
RLIMQ9NVW2 AC098831.1-201ENST00000440661 216 ntBASIC3.39□□□□□ -1.87
RLIMQ9NVW2 DAP3P1-201ENST00000441522 278 ntBASIC3.39□□□□□ -1.87
RLIMQ9NVW2 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.39□□□□□ -1.87
RLIMQ9NVW2 AC096576.1-201ENST00000489014 359 ntBASIC3.39□□□□□ -1.87
RLIMQ9NVW2 RPL23AP49-201ENST00000492925 468 ntBASIC3.39□□□□□ -1.87
RLIMQ9NVW2 AC022493.2-201ENST00000506122 481 ntBASIC3.39□□□□□ -1.87
RLIMQ9NVW2 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.39□□□□□ -1.87
RLIMQ9NVW2 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.39□□□□□ -1.87
RLIMQ9NVW2 SNORA70.14-201ENST00000516205 110 ntBASIC3.39□□□□□ -1.87
RLIMQ9NVW2 AP004607.1-201ENST00000524456 203 ntBASIC3.39□□□□□ -1.87
RLIMQ9NVW2 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.39□□□□□ -1.87
RLIMQ9NVW2 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.39□□□□□ -1.87
RLIMQ9NVW2 ELOCP31-201ENST00000540463 467 ntBASIC3.39□□□□□ -1.87
RLIMQ9NVW2 HIGD1AP1-201ENST00000550979 275 ntBASIC3.39□□□□□ -1.87
RLIMQ9NVW2 AL391261.3-201ENST00000557194 520 ntBASIC3.39□□□□□ -1.87
RLIMQ9NVW2 MIR4286-201ENST00000580651 93 ntBASIC3.39□□□□□ -1.87
RLIMQ9NVW2 MIR4273-201ENST00000582824 84 ntBASIC3.39□□□□□ -1.87
RLIMQ9NVW2 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.39□□□□□ -1.87
RLIMQ9NVW2 BNIP3P16-201ENST00000589779 534 ntBASIC3.39□□□□□ -1.87
RLIMQ9NVW2 AC012468.1-201ENST00000604888 430 ntBASIC3.39□□□□□ -1.87
RLIMQ9NVW2 AC016925.2-201ENST00000605108 242 ntBASIC3.39□□□□□ -1.87
RLIMQ9NVW2 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RLIMQ9NVW2 uc_338.22-201ENST00000622722 187 ntBASIC3.39□□□□□ -1.87
RLIMQ9NVW2 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RLIMQ9NVW2 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
RLIMQ9NVW2 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RLIMQ9NVW2 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RLIMQ9NVW2 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RLIMQ9NVW2 OTUD4P1-201ENST00000237841 3067 ntBASIC3.38□□□□□ -1.87
RLIMQ9NVW2 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RLIMQ9NVW2 RNU6-858P-201ENST00000362436 107 ntBASIC3.38□□□□□ -1.87
RLIMQ9NVW2 Y_RNA.48-201ENST00000362710 103 ntBASIC3.38□□□□□ -1.87
RLIMQ9NVW2 RNU6-527P-201ENST00000363425 104 ntBASIC3.38□□□□□ -1.87
RLIMQ9NVW2 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.38□□□□□ -1.87
RLIMQ9NVW2 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.38□□□□□ -1.87
RLIMQ9NVW2 AC005300.1-201ENST00000428401 373 ntBASIC3.38□□□□□ -1.87
RLIMQ9NVW2 AC091390.1-201ENST00000433904 331 ntBASIC3.38□□□□□ -1.87
RLIMQ9NVW2 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.38□□□□□ -1.87
RLIMQ9NVW2 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.38□□□□□ -1.87
RLIMQ9NVW2 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.38□□□□□ -1.87
RLIMQ9NVW2 HMGN2P7-201ENST00000456186 273 ntBASIC3.38□□□□□ -1.87
RLIMQ9NVW2 U3.44-201ENST00000458938 192 ntBASIC3.38□□□□□ -1.87
RLIMQ9NVW2 AC133134.1-201ENST00000466800 359 ntBASIC3.38□□□□□ -1.87
RLIMQ9NVW2 FO393415.2-201ENST00000480085 343 ntBASIC3.38□□□□□ -1.87
RLIMQ9NVW2 AL163540.1-201ENST00000485382 386 ntBASIC3.38□□□□□ -1.87
RLIMQ9NVW2 SMURF2P1-201ENST00000514992 481 ntBASIC3.38□□□□□ -1.87
RLIMQ9NVW2 NDUFB9P3-201ENST00000521269 501 ntBASIC3.38□□□□□ -1.87
RLIMQ9NVW2 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RLIMQ9NVW2 AC010186.2-204ENST00000537668 439 ntBASIC3.38□□□□□ -1.87
RLIMQ9NVW2 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.38□□□□□ -1.87
RLIMQ9NVW2 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RLIMQ9NVW2 HMGN2P15-201ENST00000585707 270 ntBASIC3.38□□□□□ -1.87
RLIMQ9NVW2 AL451007.1-201ENST00000595491 289 ntBASIC3.38□□□□□ -1.87
RLIMQ9NVW2 AC024220.1-201ENST00000603675 484 ntBASIC3.38□□□□□ -1.87
RLIMQ9NVW2 RNU1-30P-201ENST00000606575 163 ntBASIC3.38□□□□□ -1.87
RLIMQ9NVW2 RMST_8.1-201ENST00000610287 165 ntBASIC3.38□□□□□ -1.87
RLIMQ9NVW2 PART1_1.1-201ENST00000611761 217 ntBASIC3.38□□□□□ -1.87
RLIMQ9NVW2 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.38□□□□□ -1.87
RLIMQ9NVW2 AC090617.7-201ENST00000623952 126 ntBASIC3.38□□□□□ -1.87
RLIMQ9NVW2 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.38□□□□□ -1.87
RLIMQ9NVW2 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RLIMQ9NVW2 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
RLIMQ9NVW2 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RLIMQ9NVW2 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.37□□□□□ -1.87
RLIMQ9NVW2 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.37□□□□□ -1.87
RLIMQ9NVW2 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RLIMQ9NVW2 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RLIMQ9NVW2 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.37□□□□□ -1.87
RLIMQ9NVW2 Y_RNA.202-201ENST00000364083 110 ntBASIC3.37□□□□□ -1.87
RLIMQ9NVW2 SNORA22B-201ENST00000383876 138 ntBASIC3.37□□□□□ -1.87
RLIMQ9NVW2 MIR518D-201ENST00000385014 87 ntBASIC3.37□□□□□ -1.87
RLIMQ9NVW2 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
RLIMQ9NVW2 RNA5SP38-201ENST00000410750 119 ntBASIC3.37□□□□□ -1.87
RLIMQ9NVW2 AC096664.2-201ENST00000411843 406 ntBASIC3.37□□□□□ -1.87
RLIMQ9NVW2 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.37□□□□□ -1.87
RLIMQ9NVW2 BX276092.3-201ENST00000424182 230 ntBASIC3.37□□□□□ -1.87
RLIMQ9NVW2 AL353997.1-201ENST00000432936 108 ntBASIC3.37□□□□□ -1.87
RLIMQ9NVW2 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 147.1 ms