Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.45□□□□□ -2.02
HPS4Q9NQG7 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
HPS4Q9NQG7 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC2.45□□□□□ -2.02
HPS4Q9NQG7 AC022616.3-201ENST00000523940 148 ntBASIC2.45□□□□□ -2.02
HPS4Q9NQG7 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.45□□□□□ -2.02
HPS4Q9NQG7 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.45□□□□□ -2.02
HPS4Q9NQG7 MIR1273D-201ENST00000577266 86 ntBASIC2.45□□□□□ -2.02
HPS4Q9NQG7 MIR4782-201ENST00000577987 79 ntBASIC2.45□□□□□ -2.02
HPS4Q9NQG7 AC005771.1-201ENST00000585581 349 ntBASIC2.45□□□□□ -2.02
HPS4Q9NQG7 AC091152.3-201ENST00000604227 325 ntBASIC2.45□□□□□ -2.02
HPS4Q9NQG7 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
HPS4Q9NQG7 OR56A5-201ENST00000340110 738 ntBASIC2.44□□□□□ -2.02
HPS4Q9NQG7 RNU6-1083P-201ENST00000384022 107 ntBASIC2.44□□□□□ -2.02
HPS4Q9NQG7 SNORA6-201ENST00000384033 151 ntBASIC2.44□□□□□ -2.02
HPS4Q9NQG7 MIR558-201ENST00000384920 94 ntBASIC2.44□□□□□ -2.02
HPS4Q9NQG7 RNU6-1025P-201ENST00000410629 104 ntBASIC2.44□□□□□ -2.02
HPS4Q9NQG7 AC127391.1-201ENST00000411737 98 ntBASIC2.44□□□□□ -2.02
HPS4Q9NQG7 DPH3P2-201ENST00000422618 250 ntBASIC2.44□□□□□ -2.02
HPS4Q9NQG7 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.44□□□□□ -2.02
HPS4Q9NQG7 AC104850.1-201ENST00000435940 476 ntBASIC2.44□□□□□ -2.02
HPS4Q9NQG7 MTCO2P16-201ENST00000436962 677 ntBASIC2.44□□□□□ -2.02
HPS4Q9NQG7 MTND4P32-201ENST00000437189 1237 ntBASIC2.44□□□□□ -2.02
HPS4Q9NQG7 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.44□□□□□ -2.02
HPS4Q9NQG7 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.44□□□□□ -2.02
HPS4Q9NQG7 AL122001.1-201ENST00000457027 370 ntBASIC2.44□□□□□ -2.02
HPS4Q9NQG7 AL121769.1-201ENST00000469473 401 ntBASIC2.44□□□□□ -2.02
HPS4Q9NQG7 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HPS4Q9NQG7 GZMAP1-201ENST00000503054 631 ntBASIC2.44□□□□□ -2.02
HPS4Q9NQG7 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.44□□□□□ -2.02
HPS4Q9NQG7 AC023141.11-201ENST00000508864 202 ntBASIC2.44□□□□□ -2.02
HPS4Q9NQG7 RNU6-581P-201ENST00000516214 105 ntBASIC2.44□□□□□ -2.02
HPS4Q9NQG7 SNORA31.19-201ENST00000517079 126 ntBASIC2.44□□□□□ -2.02
HPS4Q9NQG7 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.44□□□□□ -2.02
HPS4Q9NQG7 AL157871.3-201ENST00000557231 293 ntBASIC2.44□□□□□ -2.02
HPS4Q9NQG7 MIR1273C-201ENST00000578669 77 ntBASIC2.44□□□□□ -2.02
HPS4Q9NQG7 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.44□□□□□ -2.02
HPS4Q9NQG7 AL158827.2-201ENST00000602494 330 ntBASIC2.44□□□□□ -2.02
HPS4Q9NQG7 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.44□□□□□ -2.02
HPS4Q9NQG7 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.44□□□□□ -2.02
HPS4Q9NQG7 AL133173.2-201ENST00000614270 90 ntBASIC2.44□□□□□ -2.02
HPS4Q9NQG7 AL158063.1-201ENST00000615349 536 ntBASIC2.44□□□□□ -2.02
HPS4Q9NQG7 AC048344.4-201ENST00000619744 527 ntBASIC2.44□□□□□ -2.02
HPS4Q9NQG7 AL691447.3-201ENST00000635020 330 ntBASIC2.44□□□□□ -2.02
HPS4Q9NQG7 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.44□□□□□ -2.02
HPS4Q9NQG7 AC007336.1-201ENST00000576365 3828 ntBASIC2.43□□□□□ -2.02
HPS4Q9NQG7 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
HPS4Q9NQG7 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.43□□□□□ -2.02
HPS4Q9NQG7 RNY1P12-201ENST00000364251 105 ntBASIC2.43□□□□□ -2.02
HPS4Q9NQG7 RNU4-40P-201ENST00000364351 143 ntBASIC2.43□□□□□ -2.02
HPS4Q9NQG7 RNY4P34-201ENST00000364779 95 ntBASIC2.43□□□□□ -2.02
HPS4Q9NQG7 U8.8-201ENST00000365399 135 ntBASIC2.43□□□□□ -2.02
HPS4Q9NQG7 SNORA20.2-201ENST00000383922 131 ntBASIC2.43□□□□□ -2.02
HPS4Q9NQG7 MIR144-201ENST00000384886 86 ntBASIC2.43□□□□□ -2.02
HPS4Q9NQG7 SNORA40.3-201ENST00000390964 122 ntBASIC2.43□□□□□ -2.02
HPS4Q9NQG7 RNU2-39P-201ENST00000410604 198 ntBASIC2.43□□□□□ -2.02
HPS4Q9NQG7 RN7SKP142-201ENST00000411236 328 ntBASIC2.43□□□□□ -2.02
HPS4Q9NQG7 HMGN1P14-201ENST00000412459 517 ntBASIC2.43□□□□□ -2.02
HPS4Q9NQG7 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.43□□□□□ -2.02
HPS4Q9NQG7 AC007560.1-201ENST00000426912 237 ntBASIC2.43□□□□□ -2.02
HPS4Q9NQG7 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.43□□□□□ -2.02
HPS4Q9NQG7 MED13P1-201ENST00000428342 171 ntBASIC2.43□□□□□ -2.02
HPS4Q9NQG7 MICF-203ENST00000432679 129 ntBASIC2.43□□□□□ -2.02
HPS4Q9NQG7 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.43□□□□□ -2.02
HPS4Q9NQG7 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.43□□□□□ -2.02
HPS4Q9NQG7 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.43□□□□□ -2.02
HPS4Q9NQG7 AC091965.2-201ENST00000512324 613 ntBASIC2.43□□□□□ -2.02
HPS4Q9NQG7 SNORA31.11-201ENST00000516528 139 ntBASIC2.43□□□□□ -2.02
HPS4Q9NQG7 RNU6-1220P-201ENST00000517126 108 ntBASIC2.43□□□□□ -2.02
HPS4Q9NQG7 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.43□□□□□ -2.02
HPS4Q9NQG7 LINC00933-203ENST00000559812 219 ntBASIC2.43□□□□□ -2.02
HPS4Q9NQG7 AL158032.1-201ENST00000605401 106 ntBASIC2.43□□□□□ -2.02
HPS4Q9NQG7 AC068276.1-201ENST00000605793 379 ntBASIC2.43□□□□□ -2.02
HPS4Q9NQG7 AL137847.3-201ENST00000611521 109 ntBASIC2.43□□□□□ -2.02
HPS4Q9NQG7 AC011890.2-201ENST00000613393 294 ntBASIC2.43□□□□□ -2.02
HPS4Q9NQG7 AC008250.2-201ENST00000615261 205 ntBASIC2.43□□□□□ -2.02
HPS4Q9NQG7 AL359547.2-201ENST00000615810 418 ntBASIC2.43□□□□□ -2.02
HPS4Q9NQG7 MIR6134-201ENST00000617606 109 ntBASIC2.43□□□□□ -2.02
HPS4Q9NQG7 PISRT1-201ENST00000626175 531 ntBASIC2.43□□□□□ -2.02
HPS4Q9NQG7 TEX21P-201ENST00000447107 1476 ntBASIC2.43□□□□□ -2.02
HPS4Q9NQG7 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.43□□□□□ -2.02
HPS4Q9NQG7 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
HPS4Q9NQG7 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.43□□□□□ -2.02
HPS4Q9NQG7 AC080128.1-201ENST00000474389 1917 ntBASIC2.42□□□□□ -2.02
HPS4Q9NQG7 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
HPS4Q9NQG7 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
HPS4Q9NQG7 MTND4P27-201ENST00000450813 1354 ntBASIC2.42□□□□□ -2.02
HPS4Q9NQG7 Y_RNA.22-201ENST00000362492 102 ntBASIC2.42□□□□□ -2.02
HPS4Q9NQG7 Y_RNA.33-201ENST00000362591 102 ntBASIC2.42□□□□□ -2.02
HPS4Q9NQG7 SNORD116-9-201ENST00000384000 95 ntBASIC2.42□□□□□ -2.02
HPS4Q9NQG7 SNORD116-3-201ENST00000384287 95 ntBASIC2.42□□□□□ -2.02
HPS4Q9NQG7 SNORD116-7-201ENST00000384404 95 ntBASIC2.42□□□□□ -2.02
HPS4Q9NQG7 SNORD116-5-201ENST00000384462 95 ntBASIC2.42□□□□□ -2.02
HPS4Q9NQG7 RNU6-19P-201ENST00000384718 107 ntBASIC2.42□□□□□ -2.02
HPS4Q9NQG7 SNORA40C-201ENST00000391285 128 ntBASIC2.42□□□□□ -2.02
HPS4Q9NQG7 AL162578.1-201ENST00000406202 378 ntBASIC2.42□□□□□ -2.02
HPS4Q9NQG7 RNU4-26P-201ENST00000410270 107 ntBASIC2.42□□□□□ -2.02
HPS4Q9NQG7 AL365338.1-201ENST00000422282 858 ntBASIC2.42□□□□□ -2.02
HPS4Q9NQG7 PTGES3P4-201ENST00000426243 356 ntBASIC2.42□□□□□ -2.02
HPS4Q9NQG7 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.42□□□□□ -2.02
HPS4Q9NQG7 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms