Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
RPAP1Q9BWH6 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
RPAP1Q9BWH6 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
RPAP1Q9BWH6 MIR337-201ENST00000362281 93 ntBASIC2.21□□□□□ -2.06
RPAP1Q9BWH6 RNA5SP190-201ENST00000365222 118 ntBASIC2.21□□□□□ -2.06
RPAP1Q9BWH6 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
RPAP1Q9BWH6 AL627390.1-201ENST00000396055 340 ntBASIC2.21□□□□□ -2.06
RPAP1Q9BWH6 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.21□□□□□ -2.06
RPAP1Q9BWH6 RPS12P24-201ENST00000412619 387 ntBASIC2.21□□□□□ -2.06
RPAP1Q9BWH6 AL109913.1-201ENST00000421173 514 ntBASIC2.21□□□□□ -2.06
RPAP1Q9BWH6 AL353777.1-201ENST00000425552 326 ntBASIC2.21□□□□□ -2.06
RPAP1Q9BWH6 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.21□□□□□ -2.06
RPAP1Q9BWH6 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.21□□□□□ -2.06
RPAP1Q9BWH6 AP003461.1-201ENST00000528866 78 ntBASIC2.21□□□□□ -2.06
RPAP1Q9BWH6 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.21□□□□□ -2.06
RPAP1Q9BWH6 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.21□□□□□ -2.06
RPAP1Q9BWH6 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.21□□□□□ -2.06
RPAP1Q9BWH6 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.21□□□□□ -2.06
RPAP1Q9BWH6 MIR5571-201ENST00000577998 113 ntBASIC2.21□□□□□ -2.06
RPAP1Q9BWH6 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.21□□□□□ -2.06
RPAP1Q9BWH6 VN1R80P-201ENST00000597126 338 ntBASIC2.21□□□□□ -2.06
RPAP1Q9BWH6 AC073544.2-201ENST00000601155 540 ntBASIC2.21□□□□□ -2.06
RPAP1Q9BWH6 AP000860.1-201ENST00000605250 559 ntBASIC2.21□□□□□ -2.06
RPAP1Q9BWH6 AL021997.1-201ENST00000605757 193 ntBASIC2.21□□□□□ -2.06
RPAP1Q9BWH6 AC144521.1-201ENST00000607148 956 ntBASIC2.21□□□□□ -2.06
RPAP1Q9BWH6 AP000240.1-201ENST00000609910 452 ntBASIC2.21□□□□□ -2.06
RPAP1Q9BWH6 uc_338.12-201ENST00000616344 181 ntBASIC2.21□□□□□ -2.06
RPAP1Q9BWH6 AC068787.1-201ENST00000623908 691 ntBASIC2.21□□□□□ -2.06
RPAP1Q9BWH6 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.21□□□□□ -2.06
RPAP1Q9BWH6 U6.99-201ENST00000637524 83 ntBASIC2.21□□□□□ -2.06
RPAP1Q9BWH6 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
RPAP1Q9BWH6 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
RPAP1Q9BWH6 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.2□□□□□ -2.06
RPAP1Q9BWH6 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.2□□□□□ -2.06
RPAP1Q9BWH6 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
RPAP1Q9BWH6 RNU6-19P-201ENST00000384718 107 ntBASIC2.2□□□□□ -2.06
RPAP1Q9BWH6 MIR1294-201ENST00000408503 142 ntBASIC2.2□□□□□ -2.06
RPAP1Q9BWH6 RNU2-36P-201ENST00000410361 191 ntBASIC2.2□□□□□ -2.06
RPAP1Q9BWH6 USP9YP6-201ENST00000413550 854 ntBASIC2.2□□□□□ -2.06
RPAP1Q9BWH6 RPL23AP39-201ENST00000415533 405 ntBASIC2.2□□□□□ -2.06
RPAP1Q9BWH6 AC098592.1-201ENST00000419352 333 ntBASIC2.2□□□□□ -2.06
RPAP1Q9BWH6 RPS27AP14-201ENST00000422868 454 ntBASIC2.2□□□□□ -2.06
RPAP1Q9BWH6 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.2□□□□□ -2.06
RPAP1Q9BWH6 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.2□□□□□ -2.06
RPAP1Q9BWH6 BRK1P2-201ENST00000442875 223 ntBASIC2.2□□□□□ -2.06
RPAP1Q9BWH6 AL606517.1-201ENST00000446914 387 ntBASIC2.2□□□□□ -2.06
RPAP1Q9BWH6 RNU6-953P-201ENST00000459154 107 ntBASIC2.2□□□□□ -2.06
RPAP1Q9BWH6 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.2□□□□□ -2.06
RPAP1Q9BWH6 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.2□□□□□ -2.06
RPAP1Q9BWH6 RNU6-250P-201ENST00000516958 103 ntBASIC2.2□□□□□ -2.06
RPAP1Q9BWH6 RNU6-1183P-201ENST00000517054 60 ntBASIC2.2□□□□□ -2.06
RPAP1Q9BWH6 MRPS36P3-201ENST00000519284 130 ntBASIC2.2□□□□□ -2.06
RPAP1Q9BWH6 AC107934.1-201ENST00000522215 217 ntBASIC2.2□□□□□ -2.06
RPAP1Q9BWH6 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.2□□□□□ -2.06
RPAP1Q9BWH6 AC010186.2-204ENST00000537668 439 ntBASIC2.2□□□□□ -2.06
RPAP1Q9BWH6 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.2□□□□□ -2.06
RPAP1Q9BWH6 ELOCP32-201ENST00000548625 324 ntBASIC2.2□□□□□ -2.06
RPAP1Q9BWH6 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.2□□□□□ -2.06
RPAP1Q9BWH6 uc_338.14-201ENST00000613162 166 ntBASIC2.2□□□□□ -2.06
RPAP1Q9BWH6 AL050303.3-201ENST00000613704 284 ntBASIC2.2□□□□□ -2.06
RPAP1Q9BWH6 AL449363.1-201ENST00000617815 186 ntBASIC2.2□□□□□ -2.06
RPAP1Q9BWH6 AC012640.5-201ENST00000623897 319 ntBASIC2.2□□□□□ -2.06
RPAP1Q9BWH6 MIR7157-201ENST00000635801 60 ntBASIC2.2□□□□□ -2.06
RPAP1Q9BWH6 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.2□□□□□ -2.06
RPAP1Q9BWH6 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.19□□□□□ -2.06
RPAP1Q9BWH6 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
RPAP1Q9BWH6 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.19□□□□□ -2.06
RPAP1Q9BWH6 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
RPAP1Q9BWH6 RNY1P10-201ENST00000363268 113 ntBASIC2.19□□□□□ -2.06
RPAP1Q9BWH6 RNU6-1214P-201ENST00000363650 109 ntBASIC2.19□□□□□ -2.06
RPAP1Q9BWH6 RNU6-457P-201ENST00000363999 107 ntBASIC2.19□□□□□ -2.06
RPAP1Q9BWH6 RNU6-817P-201ENST00000391083 104 ntBASIC2.19□□□□□ -2.06
RPAP1Q9BWH6 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.19□□□□□ -2.06
RPAP1Q9BWH6 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.19□□□□□ -2.06
RPAP1Q9BWH6 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.19□□□□□ -2.06
RPAP1Q9BWH6 FABP5P14-201ENST00000437273 393 ntBASIC2.19□□□□□ -2.06
RPAP1Q9BWH6 RPL22P17-201ENST00000438729 315 ntBASIC2.19□□□□□ -2.06
RPAP1Q9BWH6 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.19□□□□□ -2.06
RPAP1Q9BWH6 MTND1P3-201ENST00000484956 952 ntBASIC2.19□□□□□ -2.06
RPAP1Q9BWH6 RNU6-581P-201ENST00000516214 105 ntBASIC2.19□□□□□ -2.06
RPAP1Q9BWH6 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
RPAP1Q9BWH6 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.19□□□□□ -2.06
RPAP1Q9BWH6 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.19□□□□□ -2.06
RPAP1Q9BWH6 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.19□□□□□ -2.06
RPAP1Q9BWH6 ROCK1P1-201ENST00000573767 549 ntBASIC2.19□□□□□ -2.06
RPAP1Q9BWH6 MIR3118-1-201ENST00000581787 76 ntBASIC2.19□□□□□ -2.06
RPAP1Q9BWH6 MIR4765-201ENST00000585007 77 ntBASIC2.19□□□□□ -2.06
RPAP1Q9BWH6 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.19□□□□□ -2.06
RPAP1Q9BWH6 AC012493.3-201ENST00000604494 112 ntBASIC2.19□□□□□ -2.06
RPAP1Q9BWH6 AC121334.2-201ENST00000605387 271 ntBASIC2.19□□□□□ -2.06
RPAP1Q9BWH6 AL365204.3-201ENST00000612448 685 ntBASIC2.19□□□□□ -2.06
RPAP1Q9BWH6 AL589994.2-201ENST00000621124 579 ntBASIC2.19□□□□□ -2.06
RPAP1Q9BWH6 FRG1KP-201ENST00000623592 341 ntBASIC2.19□□□□□ -2.06
RPAP1Q9BWH6 AC091953.2-201ENST00000623979 160 ntBASIC2.19□□□□□ -2.06
RPAP1Q9BWH6 AC092104.1-201ENST00000497346 1441 ntBASIC2.18□□□□□ -2.06
RPAP1Q9BWH6 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
RPAP1Q9BWH6 MTND5P30-201ENST00000452896 1731 ntBASIC2.18□□□□□ -2.06
RPAP1Q9BWH6 RNU6-511P-201ENST00000363496 107 ntBASIC2.18□□□□□ -2.06
RPAP1Q9BWH6 SNORA38-201ENST00000363946 132 ntBASIC2.18□□□□□ -2.06
RPAP1Q9BWH6 RNY4P16-201ENST00000364768 94 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms