Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AL163973.1-201ENST00000484753 577 ntBASIC2.46□□□□□ -2.02
CCDC28BQ9BUN5 AC011352.1-201ENST00000512300 793 ntBASIC2.46□□□□□ -2.02
CCDC28BQ9BUN5 SNORA31.21-201ENST00000517180 77 ntBASIC2.46□□□□□ -2.02
CCDC28BQ9BUN5 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC28BQ9BUN5 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.46□□□□□ -2.02
CCDC28BQ9BUN5 AC109635.3-201ENST00000529536 185 ntBASIC2.46□□□□□ -2.02
CCDC28BQ9BUN5 AK6P1-201ENST00000540219 478 ntBASIC2.46□□□□□ -2.02
CCDC28BQ9BUN5 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC28BQ9BUN5 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CCDC28BQ9BUN5 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.46□□□□□ -2.02
CCDC28BQ9BUN5 MTATP6P3-201ENST00000581686 676 ntBASIC2.46□□□□□ -2.02
CCDC28BQ9BUN5 AC025165.5-201ENST00000602802 578 ntBASIC2.46□□□□□ -2.02
CCDC28BQ9BUN5 AL162413.1-201ENST00000603198 110 ntBASIC2.46□□□□□ -2.02
CCDC28BQ9BUN5 AC107304.1-201ENST00000604229 296 ntBASIC2.46□□□□□ -2.02
CCDC28BQ9BUN5 AL158032.1-201ENST00000605401 106 ntBASIC2.46□□□□□ -2.02
CCDC28BQ9BUN5 MIR15A-201ENST00000607334 83 ntBASIC2.46□□□□□ -2.02
CCDC28BQ9BUN5 FTX_3.1-201ENST00000610451 147 ntBASIC2.46□□□□□ -2.02
CCDC28BQ9BUN5 AC012314.7-201ENST00000619693 93 ntBASIC2.46□□□□□ -2.02
CCDC28BQ9BUN5 ELF2P3-201ENST00000445099 1506 ntBASIC2.46□□□□□ -2.02
CCDC28BQ9BUN5 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CCDC28BQ9BUN5 RNA5SP456-201ENST00000364002 114 ntBASIC2.45□□□□□ -2.02
CCDC28BQ9BUN5 Y_RNA.450-201ENST00000384198 113 ntBASIC2.45□□□□□ -2.02
CCDC28BQ9BUN5 MIR548F1-201ENST00000408667 84 ntBASIC2.45□□□□□ -2.02
CCDC28BQ9BUN5 AC007064.1-201ENST00000412238 351 ntBASIC2.45□□□□□ -2.02
CCDC28BQ9BUN5 AL592148.1-201ENST00000413568 445 ntBASIC2.45□□□□□ -2.02
CCDC28BQ9BUN5 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.45□□□□□ -2.02
CCDC28BQ9BUN5 AL160275.3-201ENST00000423876 471 ntBASIC2.45□□□□□ -2.02
CCDC28BQ9BUN5 AL592045.1-201ENST00000429867 352 ntBASIC2.45□□□□□ -2.02
CCDC28BQ9BUN5 MTATP6P13-201ENST00000438531 667 ntBASIC2.45□□□□□ -2.02
CCDC28BQ9BUN5 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.45□□□□□ -2.02
CCDC28BQ9BUN5 AC073415.1-201ENST00000449240 153 ntBASIC2.45□□□□□ -2.02
CCDC28BQ9BUN5 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.45□□□□□ -2.02
CCDC28BQ9BUN5 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.45□□□□□ -2.02
CCDC28BQ9BUN5 SNORA84-201ENST00000459229 133 ntBASIC2.45□□□□□ -2.02
CCDC28BQ9BUN5 TRBV1-201ENST00000476502 284 ntBASIC2.45□□□□□ -2.02
CCDC28BQ9BUN5 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.45□□□□□ -2.02
CCDC28BQ9BUN5 EIF4EP3-201ENST00000498782 656 ntBASIC2.45□□□□□ -2.02
CCDC28BQ9BUN5 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.45□□□□□ -2.02
CCDC28BQ9BUN5 RBBP4P6-201ENST00000508098 202 ntBASIC2.45□□□□□ -2.02
CCDC28BQ9BUN5 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.45□□□□□ -2.02
CCDC28BQ9BUN5 RNU6-1281P-201ENST00000516223 105 ntBASIC2.45□□□□□ -2.02
CCDC28BQ9BUN5 RNA5SP341-201ENST00000516261 117 ntBASIC2.45□□□□□ -2.02
CCDC28BQ9BUN5 RNU6-835P-201ENST00000516974 104 ntBASIC2.45□□□□□ -2.02
CCDC28BQ9BUN5 RNU6-1315P-201ENST00000517187 99 ntBASIC2.45□□□□□ -2.02
CCDC28BQ9BUN5 MTND4LP26-201ENST00000518144 282 ntBASIC2.45□□□□□ -2.02
CCDC28BQ9BUN5 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.45□□□□□ -2.02
CCDC28BQ9BUN5 AP003122.3-201ENST00000526316 255 ntBASIC2.45□□□□□ -2.02
CCDC28BQ9BUN5 AC084851.1-201ENST00000529105 249 ntBASIC2.45□□□□□ -2.02
CCDC28BQ9BUN5 AP005435.4-201ENST00000529514 284 ntBASIC2.45□□□□□ -2.02
CCDC28BQ9BUN5 AC243972.3-201ENST00000539655 198 ntBASIC2.45□□□□□ -2.02
CCDC28BQ9BUN5 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.45□□□□□ -2.02
CCDC28BQ9BUN5 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.45□□□□□ -2.02
CCDC28BQ9BUN5 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.45□□□□□ -2.02
CCDC28BQ9BUN5 AC008752.3-201ENST00000588113 712 ntBASIC2.45□□□□□ -2.02
CCDC28BQ9BUN5 AL138889.2-201ENST00000603883 242 ntBASIC2.45□□□□□ -2.02
CCDC28BQ9BUN5 AC004805.2-201ENST00000605382 482 ntBASIC2.45□□□□□ -2.02
CCDC28BQ9BUN5 AL354950.2-201ENST00000617939 290 ntBASIC2.45□□□□□ -2.02
CCDC28BQ9BUN5 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.45□□□□□ -2.02
CCDC28BQ9BUN5 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.45□□□□□ -2.02
CCDC28BQ9BUN5 Z99571.1-201ENST00000636677 394 ntBASIC2.45□□□□□ -2.02
CCDC28BQ9BUN5 CKAP2P1-201ENST00000555477 2049 ntBASIC2.45□□□□□ -2.02
CCDC28BQ9BUN5 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.45□□□□□ -2.02
CCDC28BQ9BUN5 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
CCDC28BQ9BUN5 FTLP6-201ENST00000355274 422 ntBASIC2.44□□□□□ -2.02
CCDC28BQ9BUN5 RNU1-140P-201ENST00000365040 165 ntBASIC2.44□□□□□ -2.02
CCDC28BQ9BUN5 RNU4-12P-201ENST00000365233 139 ntBASIC2.44□□□□□ -2.02
CCDC28BQ9BUN5 SNORA69-201ENST00000383895 132 ntBASIC2.44□□□□□ -2.02
CCDC28BQ9BUN5 RNU6-483P-201ENST00000384088 108 ntBASIC2.44□□□□□ -2.02
CCDC28BQ9BUN5 SNORA9-201ENST00000384215 133 ntBASIC2.44□□□□□ -2.02
CCDC28BQ9BUN5 Y_RNA.573-201ENST00000384763 105 ntBASIC2.44□□□□□ -2.02
CCDC28BQ9BUN5 RNU6-780P-201ENST00000391030 104 ntBASIC2.44□□□□□ -2.02
CCDC28BQ9BUN5 RNU6-550P-201ENST00000391057 101 ntBASIC2.44□□□□□ -2.02
CCDC28BQ9BUN5 RNU6-903P-201ENST00000391270 109 ntBASIC2.44□□□□□ -2.02
CCDC28BQ9BUN5 MIR888-201ENST00000401186 77 ntBASIC2.44□□□□□ -2.02
CCDC28BQ9BUN5 AL591416.1-201ENST00000404015 867 ntBASIC2.44□□□□□ -2.02
CCDC28BQ9BUN5 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.44□□□□□ -2.02
CCDC28BQ9BUN5 RNU2-68P-201ENST00000410878 191 ntBASIC2.44□□□□□ -2.02
CCDC28BQ9BUN5 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.44□□□□□ -2.02
CCDC28BQ9BUN5 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.44□□□□□ -2.02
CCDC28BQ9BUN5 SEPT14P3-201ENST00000439401 183 ntBASIC2.44□□□□□ -2.02
CCDC28BQ9BUN5 AL732372.2-207ENST00000445840 183 ntBASIC2.44□□□□□ -2.02
CCDC28BQ9BUN5 AC104058.1-201ENST00000448028 297 ntBASIC2.44□□□□□ -2.02
CCDC28BQ9BUN5 FGF7P6-202ENST00000451282 293 ntBASIC2.44□□□□□ -2.02
CCDC28BQ9BUN5 SEPT14P2-201ENST00000453405 183 ntBASIC2.44□□□□□ -2.02
CCDC28BQ9BUN5 CECR9-201ENST00000453421 199 ntBASIC2.44□□□□□ -2.02
CCDC28BQ9BUN5 AL162395.1-201ENST00000457882 422 ntBASIC2.44□□□□□ -2.02
CCDC28BQ9BUN5 FTH1P2-201ENST00000466086 412 ntBASIC2.44□□□□□ -2.02
CCDC28BQ9BUN5 MTAPP1-201ENST00000489154 819 ntBASIC2.44□□□□□ -2.02
CCDC28BQ9BUN5 AC079804.2-201ENST00000490376 200 ntBASIC2.44□□□□□ -2.02
CCDC28BQ9BUN5 AC026801.1-201ENST00000497178 464 ntBASIC2.44□□□□□ -2.02
CCDC28BQ9BUN5 AC092436.1-201ENST00000506450 503 ntBASIC2.44□□□□□ -2.02
CCDC28BQ9BUN5 SEPT14P4-201ENST00000513445 186 ntBASIC2.44□□□□□ -2.02
CCDC28BQ9BUN5 FO082796.1-201ENST00000523795 183 ntBASIC2.44□□□□□ -2.02
CCDC28BQ9BUN5 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
CCDC28BQ9BUN5 AC079600.2-201ENST00000550076 130 ntBASIC2.44□□□□□ -2.02
CCDC28BQ9BUN5 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.44□□□□□ -2.02
CCDC28BQ9BUN5 MIR1273C-201ENST00000578669 77 ntBASIC2.44□□□□□ -2.02
CCDC28BQ9BUN5 BNIP3P30-201ENST00000601184 574 ntBASIC2.44□□□□□ -2.02
CCDC28BQ9BUN5 DUSP12P1-201ENST00000612874 516 ntBASIC2.44□□□□□ -2.02
CCDC28BQ9BUN5 AC084757.4-201ENST00000616350 526 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms