Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 AC136443.5-201ENST00000603741 370 ntBASIC2.41□□□□□ -2.02
LITAFQ99732 AP001836.1-201ENST00000604675 523 ntBASIC2.41□□□□□ -2.02
LITAFQ99732 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.41□□□□□ -2.02
LITAFQ99732 MIR6768-201ENST00000610734 72 ntBASIC2.41□□□□□ -2.02
LITAFQ99732 AC006157.1-201ENST00000611750 366 ntBASIC2.41□□□□□ -2.02
LITAFQ99732 AC004852.3-201ENST00000614131 326 ntBASIC2.41□□□□□ -2.02
LITAFQ99732 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
LITAFQ99732 MIR6861-201ENST00000618657 64 ntBASIC2.41□□□□□ -2.02
LITAFQ99732 SCARNA4-202ENST00000625402 129 ntBASIC2.41□□□□□ -2.02
LITAFQ99732 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.41□□□□□ -2.02
LITAFQ99732 U4.7-201ENST00000638126 106 ntBASIC2.41□□□□□ -2.02
LITAFQ99732 CD36-221ENST00000534394 1741 ntTSL 2 BASIC2.41□□□□□ -2.02
LITAFQ99732 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.41□□□□□ -2.02
LITAFQ99732 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC2.41□□□□□ -2.02
LITAFQ99732 SRP72P2-201ENST00000344851 1979 ntBASIC2.41□□□□□ -2.02
LITAFQ99732 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
LITAFQ99732 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC2.41□□□□□ -2.02
LITAFQ99732 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
LITAFQ99732 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.02
LITAFQ99732 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
LITAFQ99732 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.4□□□□□ -2.03
LITAFQ99732 Y_RNA.48-201ENST00000362710 103 ntBASIC2.4□□□□□ -2.03
LITAFQ99732 Y_RNA.158-201ENST00000363651 101 ntBASIC2.4□□□□□ -2.03
LITAFQ99732 Y_RNA.364-201ENST00000365532 101 ntBASIC2.4□□□□□ -2.03
LITAFQ99732 RNU6-898P-201ENST00000365627 104 ntBASIC2.4□□□□□ -2.03
LITAFQ99732 Y_RNA.459-201ENST00000384251 102 ntBASIC2.4□□□□□ -2.03
LITAFQ99732 MIR521-1-201ENST00000384902 87 ntBASIC2.4□□□□□ -2.03
LITAFQ99732 MRPL42P3-201ENST00000401492 326 ntBASIC2.4□□□□□ -2.03
LITAFQ99732 AL591034.2-201ENST00000402839 359 ntBASIC2.4□□□□□ -2.03
LITAFQ99732 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.4□□□□□ -2.03
LITAFQ99732 AC079355.1-201ENST00000421770 223 ntBASIC2.4□□□□□ -2.03
LITAFQ99732 GAS5-208ENST00000425771 242 ntTSL 3 BASIC2.4□□□□□ -2.03
LITAFQ99732 RSL24D1P6-201ENST00000426934 401 ntBASIC2.4□□□□□ -2.03
LITAFQ99732 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC2.4□□□□□ -2.03
LITAFQ99732 AL357552.1-201ENST00000445254 415 ntBASIC2.4□□□□□ -2.03
LITAFQ99732 RPL37P4-201ENST00000448908 268 ntBASIC2.4□□□□□ -2.03
LITAFQ99732 GSTA11P-201ENST00000452866 669 ntBASIC2.4□□□□□ -2.03
LITAFQ99732 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.4□□□□□ -2.03
LITAFQ99732 RPL9P32-201ENST00000464118 620 ntBASIC2.4□□□□□ -2.03
LITAFQ99732 FO393415.2-201ENST00000480085 343 ntBASIC2.4□□□□□ -2.03
LITAFQ99732 AC092185.1-201ENST00000491371 97 ntBASIC2.4□□□□□ -2.03
LITAFQ99732 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC2.4□□□□□ -2.03
LITAFQ99732 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.4□□□□□ -2.03
LITAFQ99732 AC022447.4-201ENST00000504053 364 ntBASIC2.4□□□□□ -2.03
LITAFQ99732 AC006445.2-201ENST00000510061 472 ntBASIC2.4□□□□□ -2.03
LITAFQ99732 FTH1P9-201ENST00000513251 355 ntBASIC2.4□□□□□ -2.03
LITAFQ99732 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC2.4□□□□□ -2.03
LITAFQ99732 RNU2-27P-201ENST00000516185 142 ntBASIC2.4□□□□□ -2.03
LITAFQ99732 RNA5SP164-201ENST00000516533 110 ntBASIC2.4□□□□□ -2.03
LITAFQ99732 SNORD116.3-201ENST00000517176 78 ntBASIC2.4□□□□□ -2.03
LITAFQ99732 CBX3P8-201ENST00000532412 525 ntBASIC2.4□□□□□ -2.03
LITAFQ99732 AC005476.1-201ENST00000554427 397 ntBASIC2.4□□□□□ -2.03
LITAFQ99732 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.4□□□□□ -2.03
LITAFQ99732 SUB1P3-201ENST00000564581 315 ntBASIC2.4□□□□□ -2.03
LITAFQ99732 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.4□□□□□ -2.03
LITAFQ99732 SRGNP1-201ENST00000603392 451 ntBASIC2.4□□□□□ -2.03
LITAFQ99732 AC008962.1-201ENST00000605729 304 ntBASIC2.4□□□□□ -2.03
LITAFQ99732 AC005046.1-201ENST00000608515 625 ntBASIC2.4□□□□□ -2.03
LITAFQ99732 AL049539.1-201ENST00000611964 459 ntBASIC2.4□□□□□ -2.03
LITAFQ99732 AC090617.7-201ENST00000623952 126 ntBASIC2.4□□□□□ -2.03
LITAFQ99732 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC2.4□□□□□ -2.03
LITAFQ99732 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC2.4□□□□□ -2.03
LITAFQ99732 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.4□□□□□ -2.03
LITAFQ99732 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
LITAFQ99732 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.4□□□□□ -2.03
LITAFQ99732 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC2.4□□□□□ -2.03
LITAFQ99732 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
LITAFQ99732 BRAFP1-201ENST00000445336 2703 ntBASIC2.39□□□□□ -2.03
LITAFQ99732 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
LITAFQ99732 MIR383-201ENST00000362257 73 ntBASIC2.39□□□□□ -2.03
LITAFQ99732 RNU6-336P-201ENST00000364891 107 ntBASIC2.39□□□□□ -2.03
LITAFQ99732 RNU1-115P-201ENST00000365329 160 ntBASIC2.39□□□□□ -2.03
LITAFQ99732 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
LITAFQ99732 RPS4XP3-201ENST00000398541 413 ntBASIC2.39□□□□□ -2.03
LITAFQ99732 RPS29P13-201ENST00000402041 169 ntBASIC2.39□□□□□ -2.03
LITAFQ99732 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.39□□□□□ -2.03
LITAFQ99732 RN7SKP53-201ENST00000411337 315 ntBASIC2.39□□□□□ -2.03
LITAFQ99732 NDUFS5P4-201ENST00000412983 318 ntBASIC2.39□□□□□ -2.03
LITAFQ99732 AC108032.1-201ENST00000416706 207 ntBASIC2.39□□□□□ -2.03
LITAFQ99732 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.39□□□□□ -2.03
LITAFQ99732 AC099548.1-201ENST00000421443 426 ntBASIC2.39□□□□□ -2.03
LITAFQ99732 RPL23AP82-202ENST00000427528 469 ntBASIC2.39□□□□□ -2.03
LITAFQ99732 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC2.39□□□□□ -2.03
LITAFQ99732 AC073264.2-201ENST00000448886 166 ntBASIC2.39□□□□□ -2.03
LITAFQ99732 BTF3P15-201ENST00000455606 336 ntBASIC2.39□□□□□ -2.03
LITAFQ99732 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.39□□□□□ -2.03
LITAFQ99732 CENPBD1P1-201ENST00000464061 469 ntBASIC2.39□□□□□ -2.03
LITAFQ99732 RPL17P19-201ENST00000489069 552 ntBASIC2.39□□□□□ -2.03
LITAFQ99732 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC2.39□□□□□ -2.03
LITAFQ99732 RNU6-1046P-201ENST00000516538 107 ntBASIC2.39□□□□□ -2.03
LITAFQ99732 RNU6-612P-201ENST00000516909 102 ntBASIC2.39□□□□□ -2.03
LITAFQ99732 AP005902.1-201ENST00000521358 186 ntBASIC2.39□□□□□ -2.03
LITAFQ99732 AC022695.1-201ENST00000522089 237 ntBASIC2.39□□□□□ -2.03
LITAFQ99732 AC023442.1-201ENST00000531247 422 ntBASIC2.39□□□□□ -2.03
LITAFQ99732 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.39□□□□□ -2.03
LITAFQ99732 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC2.39□□□□□ -2.03
LITAFQ99732 HIGD1AP1-201ENST00000550979 275 ntBASIC2.39□□□□□ -2.03
LITAFQ99732 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC2.39□□□□□ -2.03
LITAFQ99732 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.39□□□□□ -2.03
LITAFQ99732 MIR4680-201ENST00000580906 66 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms