Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.81□□□□□ -1.96
RAD9AQ99638 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.8□□□□□ -1.96
RAD9AQ99638 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
RAD9AQ99638 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
RAD9AQ99638 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
RAD9AQ99638 Y_RNA.409-201ENST00000383990 98 ntBASIC2.8□□□□□ -1.96
RAD9AQ99638 RNU6-1215P-201ENST00000384441 102 ntBASIC2.8□□□□□ -1.96
RAD9AQ99638 Y_RNA.576-201ENST00000384781 102 ntBASIC2.8□□□□□ -1.96
RAD9AQ99638 AC068050.1-201ENST00000394891 380 ntBASIC2.8□□□□□ -1.96
RAD9AQ99638 AL356057.2-201ENST00000403318 432 ntBASIC2.8□□□□□ -1.96
RAD9AQ99638 SNORD88.1-201ENST00000408684 91 ntBASIC2.8□□□□□ -1.96
RAD9AQ99638 NDUFS5P4-201ENST00000412983 318 ntBASIC2.8□□□□□ -1.96
RAD9AQ99638 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.8□□□□□ -1.96
RAD9AQ99638 OR51A5P-201ENST00000415429 942 ntBASIC2.8□□□□□ -1.96
RAD9AQ99638 MTCO1P21-201ENST00000416634 589 ntBASIC2.8□□□□□ -1.96
RAD9AQ99638 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.8□□□□□ -1.96
RAD9AQ99638 HMGB1P9-201ENST00000429856 646 ntBASIC2.8□□□□□ -1.96
RAD9AQ99638 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.8□□□□□ -1.96
RAD9AQ99638 DPPA3P1-201ENST00000448050 469 ntBASIC2.8□□□□□ -1.96
RAD9AQ99638 PSPHP1-201ENST00000450062 261 ntBASIC2.8□□□□□ -1.96
RAD9AQ99638 RPL26P9-201ENST00000457466 433 ntBASIC2.8□□□□□ -1.96
RAD9AQ99638 RPS29P15-201ENST00000458329 171 ntBASIC2.8□□□□□ -1.96
RAD9AQ99638 snoU13.23-201ENST00000458863 104 ntBASIC2.8□□□□□ -1.96
RAD9AQ99638 RPL21P41-201ENST00000459863 264 ntBASIC2.8□□□□□ -1.96
RAD9AQ99638 RPL9P33-201ENST00000484311 566 ntBASIC2.8□□□□□ -1.96
RAD9AQ99638 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.8□□□□□ -1.96
RAD9AQ99638 AC104806.1-201ENST00000508720 308 ntBASIC2.8□□□□□ -1.96
RAD9AQ99638 AC114786.4-201ENST00000508771 728 ntBASIC2.8□□□□□ -1.96
RAD9AQ99638 RN7SKP24-201ENST00000515888 284 ntBASIC2.8□□□□□ -1.96
RAD9AQ99638 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.8□□□□□ -1.96
RAD9AQ99638 RNA5SP320-201ENST00000516263 124 ntBASIC2.8□□□□□ -1.96
RAD9AQ99638 RNU6-506P-201ENST00000516553 94 ntBASIC2.8□□□□□ -1.96
RAD9AQ99638 RN7SKP40-201ENST00000517211 242 ntBASIC2.8□□□□□ -1.96
RAD9AQ99638 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.8□□□□□ -1.96
RAD9AQ99638 AC016957.1-201ENST00000534895 309 ntBASIC2.8□□□□□ -1.96
RAD9AQ99638 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.8□□□□□ -1.96
RAD9AQ99638 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
RAD9AQ99638 AC103810.1-201ENST00000579873 453 ntBASIC2.8□□□□□ -1.96
RAD9AQ99638 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.8□□□□□ -1.96
RAD9AQ99638 AL355598.1-201ENST00000604169 202 ntBASIC2.8□□□□□ -1.96
RAD9AQ99638 AC007938.3-201ENST00000604965 623 ntBASIC2.8□□□□□ -1.96
RAD9AQ99638 AC017083.3-201ENST00000609955 700 ntBASIC2.8□□□□□ -1.96
RAD9AQ99638 AC122108.2-201ENST00000611946 526 ntBASIC2.8□□□□□ -1.96
RAD9AQ99638 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
RAD9AQ99638 UCA1.1-201ENST00000620952 75 ntBASIC2.8□□□□□ -1.96
RAD9AQ99638 AC011155.2-201ENST00000623202 216 ntBASIC2.8□□□□□ -1.96
RAD9AQ99638 AC139792.3-201ENST00000623525 224 ntBASIC2.8□□□□□ -1.96
RAD9AQ99638 AC005609.4-201ENST00000625071 447 ntBASIC2.8□□□□□ -1.96
RAD9AQ99638 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
RAD9AQ99638 AP006437.1-201ENST00000641440 3685 ntBASIC2.8□□□□□ -1.96
RAD9AQ99638 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.79□□□□□ -1.96
RAD9AQ99638 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
RAD9AQ99638 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
RAD9AQ99638 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.79□□□□□ -1.96
RAD9AQ99638 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
RAD9AQ99638 RNU6-778P-201ENST00000363269 103 ntBASIC2.79□□□□□ -1.96
RAD9AQ99638 SNORA4.3-201ENST00000365564 137 ntBASIC2.79□□□□□ -1.96
RAD9AQ99638 RNU1-73P-201ENST00000383971 164 ntBASIC2.79□□□□□ -1.96
RAD9AQ99638 Y_RNA.516-201ENST00000384541 124 ntBASIC2.79□□□□□ -1.96
RAD9AQ99638 CISD1P1-201ENST00000393907 327 ntBASIC2.79□□□□□ -1.96
RAD9AQ99638 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.79□□□□□ -1.96
RAD9AQ99638 RPL26P27-201ENST00000414397 437 ntBASIC2.79□□□□□ -1.96
RAD9AQ99638 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.79□□□□□ -1.96
RAD9AQ99638 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.79□□□□□ -1.96
RAD9AQ99638 AL451074.5-201ENST00000415894 435 ntBASIC2.79□□□□□ -1.96
RAD9AQ99638 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.79□□□□□ -1.96
RAD9AQ99638 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.79□□□□□ -1.96
RAD9AQ99638 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.79□□□□□ -1.96
RAD9AQ99638 AL139415.2-201ENST00000431968 163 ntBASIC2.79□□□□□ -1.96
RAD9AQ99638 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC2.79□□□□□ -1.96
RAD9AQ99638 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.79□□□□□ -1.96
RAD9AQ99638 RPL23AP20-201ENST00000447965 421 ntBASIC2.79□□□□□ -1.96
RAD9AQ99638 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
RAD9AQ99638 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.79□□□□□ -1.96
RAD9AQ99638 RPL23AP70-201ENST00000483361 460 ntBASIC2.79□□□□□ -1.96
RAD9AQ99638 SUMO2P6-201ENST00000505273 288 ntBASIC2.79□□□□□ -1.96
RAD9AQ99638 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.79□□□□□ -1.96
RAD9AQ99638 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.79□□□□□ -1.96
RAD9AQ99638 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.79□□□□□ -1.96
RAD9AQ99638 AP001893.2-201ENST00000526949 202 ntBASIC2.79□□□□□ -1.96
RAD9AQ99638 AC084851.1-201ENST00000529105 249 ntBASIC2.79□□□□□ -1.96
RAD9AQ99638 RANP3-201ENST00000530970 276 ntBASIC2.79□□□□□ -1.96
RAD9AQ99638 AP003034.1-201ENST00000534621 422 ntBASIC2.79□□□□□ -1.96
RAD9AQ99638 NACAP3-201ENST00000552100 481 ntBASIC2.79□□□□□ -1.96
RAD9AQ99638 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.79□□□□□ -1.96
RAD9AQ99638 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.79□□□□□ -1.96
RAD9AQ99638 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.79□□□□□ -1.96
RAD9AQ99638 AL670379.4-201ENST00000605279 254 ntBASIC2.79□□□□□ -1.96
RAD9AQ99638 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.79□□□□□ -1.96
RAD9AQ99638 AC107871.2-201ENST00000612894 502 ntBASIC2.79□□□□□ -1.96
RAD9AQ99638 AP001486.3-201ENST00000615334 372 ntBASIC2.79□□□□□ -1.96
RAD9AQ99638 AL359880.1-201ENST00000621879 266 ntBASIC2.79□□□□□ -1.96
RAD9AQ99638 MIR6733-201ENST00000635723 61 ntBASIC2.79□□□□□ -1.96
RAD9AQ99638 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
RAD9AQ99638 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.79□□□□□ -1.96
RAD9AQ99638 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.79□□□□□ -1.96
RAD9AQ99638 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
RAD9AQ99638 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
RAD9AQ99638 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.78□□□□□ -1.96
RAD9AQ99638 OR4G2P-201ENST00000328113 903 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms