Protein–RNA interactions for Protein: Q99250

SCN2A, Sodium channel protein type 2 subunit alpha, humanhuman

Predictions only

Length 2,005 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2AQ99250 AC026241.1-201ENST00000517873 2142 ntBASIC2□□□□□ -2.09
SCN2AQ99250 FAM92A1P1-201ENST00000528023 890 ntBASIC2□□□□□ -2.09
SCN2AQ99250 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2□□□□□ -2.09
SCN2AQ99250 AC026464.5-201ENST00000562497 722 ntBASIC2□□□□□ -2.09
SCN2AQ99250 MIR3609-201ENST00000582661 80 ntBASIC2□□□□□ -2.09
SCN2AQ99250 AC098848.2-201ENST00000588023 330 ntBASIC2□□□□□ -2.09
SCN2AQ99250 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC2□□□□□ -2.09
SCN2AQ99250 AC013553.2-201ENST00000604244 589 ntBASIC2□□□□□ -2.09
SCN2AQ99250 AC008250.2-201ENST00000615261 205 ntBASIC2□□□□□ -2.09
SCN2AQ99250 AC068792.1-201ENST00000621354 417 ntBASIC2□□□□□ -2.09
SCN2AQ99250 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2□□□□□ -2.09
SCN2AQ99250 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2□□□□□ -2.09
SCN2AQ99250 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2□□□□□ -2.09
SCN2AQ99250 AC103710.2-202ENST00000641454 2853 ntBASIC2□□□□□ -2.09
SCN2AQ99250 Y_RNA.296-201ENST00000364930 108 ntBASIC2□□□□□ -2.09
SCN2AQ99250 RNU6-395P-201ENST00000365662 106 ntBASIC2□□□□□ -2.09
SCN2AQ99250 RNU6-166P-201ENST00000384371 107 ntBASIC2□□□□□ -2.09
SCN2AQ99250 RPL21P75-201ENST00000396599 483 ntBASIC2□□□□□ -2.09
SCN2AQ99250 RPL21P28-201ENST00000401418 483 ntBASIC2□□□□□ -2.09
SCN2AQ99250 AL592114.1-201ENST00000403842 483 ntBASIC2□□□□□ -2.09
SCN2AQ99250 SNORA11.4-201ENST00000408823 129 ntBASIC2□□□□□ -2.09
SCN2AQ99250 RNU6-387P-201ENST00000411331 105 ntBASIC2□□□□□ -2.09
SCN2AQ99250 RNA5SP111-201ENST00000411386 101 ntBASIC2□□□□□ -2.09
SCN2AQ99250 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2□□□□□ -2.09
SCN2AQ99250 MTCO2P18-201ENST00000457151 658 ntBASIC2□□□□□ -2.09
SCN2AQ99250 RPL21P39-201ENST00000463605 483 ntBASIC2□□□□□ -2.09
SCN2AQ99250 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC2□□□□□ -2.09
SCN2AQ99250 RPL21P93-201ENST00000480465 489 ntBASIC2□□□□□ -2.09
SCN2AQ99250 AC093591.1-201ENST00000491435 481 ntBASIC2□□□□□ -2.09
SCN2AQ99250 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2□□□□□ -2.09
SCN2AQ99250 RPL21P16-201ENST00000495531 483 ntBASIC2□□□□□ -2.09
SCN2AQ99250 SUMO2P6-201ENST00000505273 288 ntBASIC2□□□□□ -2.09
SCN2AQ99250 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2□□□□□ -2.09
SCN2AQ99250 SNORA31.11-201ENST00000516528 139 ntBASIC2□□□□□ -2.09
SCN2AQ99250 RNU6-572P-201ENST00000516724 80 ntBASIC2□□□□□ -2.09
SCN2AQ99250 AC009902.1-201ENST00000519351 183 ntBASIC2□□□□□ -2.09
SCN2AQ99250 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2□□□□□ -2.09
SCN2AQ99250 AC022893.3-201ENST00000607665 437 ntBASIC2□□□□□ -2.09
SCN2AQ99250 AC009318.2-201ENST00000610917 651 ntBASIC2□□□□□ -2.09
SCN2AQ99250 UBE2Q2P6-201ENST00000612666 153 ntBASIC2□□□□□ -2.09
SCN2AQ99250 AC073308.1-201ENST00000623696 305 ntBASIC2□□□□□ -2.09
SCN2AQ99250 MTND5P42-201ENST00000637720 498 ntBASIC2□□□□□ -2.09
SCN2AQ99250 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SCN2AQ99250 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SCN2AQ99250 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.99□□□□□ -2.09
SCN2AQ99250 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.99□□□□□ -2.09
SCN2AQ99250 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SCN2AQ99250 SNORD56.2-201ENST00000363242 71 ntBASIC1.99□□□□□ -2.09
SCN2AQ99250 RNU6-1097P-201ENST00000363586 107 ntBASIC1.99□□□□□ -2.09
SCN2AQ99250 SNORA23-201ENST00000365128 182 ntBASIC1.99□□□□□ -2.09
SCN2AQ99250 RNU6-898P-201ENST00000365627 104 ntBASIC1.99□□□□□ -2.09
SCN2AQ99250 MIR518D-201ENST00000385014 87 ntBASIC1.99□□□□□ -2.09
SCN2AQ99250 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.99□□□□□ -2.09
SCN2AQ99250 AL365496.1-201ENST00000426885 215 ntBASIC1.99□□□□□ -2.09
SCN2AQ99250 AC007560.1-201ENST00000426912 237 ntBASIC1.99□□□□□ -2.09
SCN2AQ99250 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.99□□□□□ -2.09
SCN2AQ99250 AL603825.1-201ENST00000438481 80 ntBASIC1.99□□□□□ -2.09
SCN2AQ99250 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC1.99□□□□□ -2.09
SCN2AQ99250 AL078601.1-201ENST00000444542 271 ntBASIC1.99□□□□□ -2.09
SCN2AQ99250 AC011753.1-201ENST00000451001 220 ntBASIC1.99□□□□□ -2.09
SCN2AQ99250 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.99□□□□□ -2.09
SCN2AQ99250 AC108210.2-201ENST00000503681 201 ntBASIC1.99□□□□□ -2.09
SCN2AQ99250 AC098591.2-201ENST00000510152 315 ntBASIC1.99□□□□□ -2.09
SCN2AQ99250 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.99□□□□□ -2.09
SCN2AQ99250 VTRNA2-2P-201ENST00000516091 103 ntBASIC1.99□□□□□ -2.09
SCN2AQ99250 RNU6-991P-201ENST00000516168 107 ntBASIC1.99□□□□□ -2.09
SCN2AQ99250 RNU6-143P-201ENST00000516942 93 ntBASIC1.99□□□□□ -2.09
SCN2AQ99250 AC022616.3-201ENST00000523940 148 ntBASIC1.99□□□□□ -2.09
SCN2AQ99250 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.99□□□□□ -2.09
SCN2AQ99250 AC090897.2-201ENST00000581715 130 ntBASIC1.99□□□□□ -2.09
SCN2AQ99250 AC010620.1-201ENST00000601088 1102 ntBASIC1.99□□□□□ -2.09
SCN2AQ99250 AC073544.2-201ENST00000601155 540 ntBASIC1.99□□□□□ -2.09
SCN2AQ99250 AC072046.2-201ENST00000618366 268 ntBASIC1.99□□□□□ -2.09
SCN2AQ99250 AC010378.1-201ENST00000619270 362 ntBASIC1.99□□□□□ -2.09
SCN2AQ99250 AC011155.2-201ENST00000623202 216 ntBASIC1.99□□□□□ -2.09
SCN2AQ99250 AC093648.1-201ENST00000623546 606 ntBASIC1.99□□□□□ -2.09
SCN2AQ99250 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.99□□□□□ -2.09
SCN2AQ99250 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SCN2AQ99250 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SCN2AQ99250 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SCN2AQ99250 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.98□□□□□ -2.09
SCN2AQ99250 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SCN2AQ99250 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
SCN2AQ99250 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SCN2AQ99250 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
SCN2AQ99250 AL079342.1-201ENST00000401460 267 ntBASIC1.98□□□□□ -2.09
SCN2AQ99250 NDUFS5P1-201ENST00000405668 289 ntBASIC1.98□□□□□ -2.09
SCN2AQ99250 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
SCN2AQ99250 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.98□□□□□ -2.09
SCN2AQ99250 RPS15AP27-201ENST00000449183 343 ntBASIC1.98□□□□□ -2.09
SCN2AQ99250 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.98□□□□□ -2.09
SCN2AQ99250 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.98□□□□□ -2.09
SCN2AQ99250 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.98□□□□□ -2.09
SCN2AQ99250 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.98□□□□□ -2.09
SCN2AQ99250 AC104435.1-201ENST00000483483 166 ntBASIC1.98□□□□□ -2.09
SCN2AQ99250 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.98□□□□□ -2.09
SCN2AQ99250 AC104806.1-201ENST00000508720 308 ntBASIC1.98□□□□□ -2.09
SCN2AQ99250 SCARNA16.3-201ENST00000516595 184 ntBASIC1.98□□□□□ -2.09
SCN2AQ99250 GLYCAM1-201ENST00000546596 285 ntBASIC1.98□□□□□ -2.09
SCN2AQ99250 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 165.9 ms