Protein–RNA interactions for Protein: Q96Q05

TRAPPC9, Trafficking protein particle complex subunit 9, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9Q96Q05 MIR4276-201ENST00000584832 70 ntBASIC3.24□□□□□ -1.89
TRAPPC9Q96Q05 AL035413.2-201ENST00000604801 525 ntBASIC3.24□□□□□ -1.89
TRAPPC9Q96Q05 AC087045.1-201ENST00000605856 382 ntBASIC3.24□□□□□ -1.89
TRAPPC9Q96Q05 MIR6134-201ENST00000617606 109 ntBASIC3.24□□□□□ -1.89
TRAPPC9Q96Q05 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.24□□□□□ -1.89
TRAPPC9Q96Q05 AC103705.1-201ENST00000619013 241 ntBASIC3.24□□□□□ -1.89
TRAPPC9Q96Q05 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
TRAPPC9Q96Q05 AC093536.2-201ENST00000565257 1406 ntBASIC3.24□□□□□ -1.89
TRAPPC9Q96Q05 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TRAPPC9Q96Q05 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TRAPPC9Q96Q05 Z83843.1-201ENST00000604070 3685 ntBASIC3.24□□□□□ -1.89
TRAPPC9Q96Q05 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
TRAPPC9Q96Q05 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.23□□□□□ -1.89
TRAPPC9Q96Q05 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
TRAPPC9Q96Q05 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
TRAPPC9Q96Q05 Y_RNA.157-201ENST00000363638 102 ntBASIC3.23□□□□□ -1.89
TRAPPC9Q96Q05 Y_RNA.167-201ENST00000363735 109 ntBASIC3.23□□□□□ -1.89
TRAPPC9Q96Q05 CD24P4-201ENST00000382840 243 ntBASIC3.23□□□□□ -1.89
TRAPPC9Q96Q05 SNORA46-201ENST00000384762 135 ntBASIC3.23□□□□□ -1.89
TRAPPC9Q96Q05 MIR128-1-201ENST00000384921 82 ntBASIC3.23□□□□□ -1.89
TRAPPC9Q96Q05 MIR34A-201ENST00000385130 110 ntBASIC3.23□□□□□ -1.89
TRAPPC9Q96Q05 SNORA48.2-201ENST00000390926 124 ntBASIC3.23□□□□□ -1.89
TRAPPC9Q96Q05 SNORA26.7-201ENST00000391288 122 ntBASIC3.23□□□□□ -1.89
TRAPPC9Q96Q05 RNU4-26P-201ENST00000410270 107 ntBASIC3.23□□□□□ -1.89
TRAPPC9Q96Q05 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.23□□□□□ -1.89
TRAPPC9Q96Q05 AL645937.1-202ENST00000421799 937 ntBASIC3.23□□□□□ -1.89
TRAPPC9Q96Q05 AL139281.1-201ENST00000422120 335 ntBASIC3.23□□□□□ -1.89
TRAPPC9Q96Q05 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.23□□□□□ -1.89
TRAPPC9Q96Q05 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.23□□□□□ -1.89
TRAPPC9Q96Q05 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.23□□□□□ -1.89
TRAPPC9Q96Q05 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.23□□□□□ -1.89
TRAPPC9Q96Q05 RPL21P2-201ENST00000440049 481 ntBASIC3.23□□□□□ -1.89
TRAPPC9Q96Q05 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.23□□□□□ -1.89
TRAPPC9Q96Q05 SNORA59A-201ENST00000459326 152 ntBASIC3.23□□□□□ -1.89
TRAPPC9Q96Q05 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.23□□□□□ -1.89
TRAPPC9Q96Q05 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.23□□□□□ -1.89
TRAPPC9Q96Q05 MTCYBP18-201ENST00000501056 747 ntBASIC3.23□□□□□ -1.89
TRAPPC9Q96Q05 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.23□□□□□ -1.89
TRAPPC9Q96Q05 HIGD1AP13-201ENST00000509878 289 ntBASIC3.23□□□□□ -1.89
TRAPPC9Q96Q05 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.23□□□□□ -1.89
TRAPPC9Q96Q05 SNORA31.26-201ENST00000517250 137 ntBASIC3.23□□□□□ -1.89
TRAPPC9Q96Q05 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.23□□□□□ -1.89
TRAPPC9Q96Q05 AF235103.2-201ENST00000525753 346 ntBASIC3.23□□□□□ -1.89
TRAPPC9Q96Q05 AC091564.4-201ENST00000533934 2194 ntBASIC3.23□□□□□ -1.89
TRAPPC9Q96Q05 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.23□□□□□ -1.89
TRAPPC9Q96Q05 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.23□□□□□ -1.89
TRAPPC9Q96Q05 VN1R80P-201ENST00000597126 338 ntBASIC3.23□□□□□ -1.89
TRAPPC9Q96Q05 AC092747.3-201ENST00000603769 301 ntBASIC3.23□□□□□ -1.89
TRAPPC9Q96Q05 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.23□□□□□ -1.89
TRAPPC9Q96Q05 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.23□□□□□ -1.89
TRAPPC9Q96Q05 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.23□□□□□ -1.89
TRAPPC9Q96Q05 MIR3199-2-201ENST00000636243 86 ntBASIC3.23□□□□□ -1.89
TRAPPC9Q96Q05 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TRAPPC9Q96Q05 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.23□□□□□ -1.89
TRAPPC9Q96Q05 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
TRAPPC9Q96Q05 AC008669.1-201ENST00000565823 2178 ntBASIC3.22□□□□□ -1.89
TRAPPC9Q96Q05 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.22□□□□□ -1.89
TRAPPC9Q96Q05 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.22□□□□□ -1.89
TRAPPC9Q96Q05 MIR518D-201ENST00000385014 87 ntBASIC3.22□□□□□ -1.89
TRAPPC9Q96Q05 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
TRAPPC9Q96Q05 Y_RNA.615-201ENST00000410769 117 ntBASIC3.22□□□□□ -1.89
TRAPPC9Q96Q05 RPLP0P7-201ENST00000416050 667 ntBASIC3.22□□□□□ -1.89
TRAPPC9Q96Q05 AL356968.1-201ENST00000416622 474 ntBASIC3.22□□□□□ -1.89
TRAPPC9Q96Q05 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.22□□□□□ -1.89
TRAPPC9Q96Q05 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.22□□□□□ -1.89
TRAPPC9Q96Q05 AC115115.1-201ENST00000449927 248 ntBASIC3.22□□□□□ -1.89
TRAPPC9Q96Q05 BTF3P15-201ENST00000455606 336 ntBASIC3.22□□□□□ -1.89
TRAPPC9Q96Q05 RN7SKP282-201ENST00000516824 299 ntBASIC3.22□□□□□ -1.89
TRAPPC9Q96Q05 SNORA25.17-201ENST00000517184 124 ntBASIC3.22□□□□□ -1.89
TRAPPC9Q96Q05 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.22□□□□□ -1.89
TRAPPC9Q96Q05 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.22□□□□□ -1.89
TRAPPC9Q96Q05 AC060780.3-201ENST00000589464 80 ntBASIC3.22□□□□□ -1.89
TRAPPC9Q96Q05 AL162713.1-201ENST00000604480 262 ntBASIC3.22□□□□□ -1.89
TRAPPC9Q96Q05 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
TRAPPC9Q96Q05 AC006504.8-201ENST00000621046 635 ntBASIC3.22□□□□□ -1.89
TRAPPC9Q96Q05 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.22□□□□□ -1.89
TRAPPC9Q96Q05 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
TRAPPC9Q96Q05 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
TRAPPC9Q96Q05 AC017071.1-201ENST00000564407 2204 ntBASIC3.21□□□□□ -1.89
TRAPPC9Q96Q05 ADAM3A-203ENST00000461344 2157 ntBASIC3.21□□□□□ -1.9
TRAPPC9Q96Q05 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
TRAPPC9Q96Q05 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
TRAPPC9Q96Q05 RNU1-105P-201ENST00000363470 161 ntBASIC3.21□□□□□ -1.9
TRAPPC9Q96Q05 U3.12-201ENST00000364498 214 ntBASIC3.21□□□□□ -1.9
TRAPPC9Q96Q05 Y_RNA.324-201ENST00000365165 102 ntBASIC3.21□□□□□ -1.9
TRAPPC9Q96Q05 RNU6-898P-201ENST00000365627 104 ntBASIC3.21□□□□□ -1.9
TRAPPC9Q96Q05 RPL30P16-201ENST00000419341 429 ntBASIC3.21□□□□□ -1.9
TRAPPC9Q96Q05 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.21□□□□□ -1.9
TRAPPC9Q96Q05 PGBD4P6-201ENST00000421501 610 ntBASIC3.21□□□□□ -1.9
TRAPPC9Q96Q05 HMGB1P31-201ENST00000437242 427 ntBASIC3.21□□□□□ -1.9
TRAPPC9Q96Q05 MTCO3P18-201ENST00000440206 761 ntBASIC3.21□□□□□ -1.9
TRAPPC9Q96Q05 WASF1P1-201ENST00000447560 1131 ntBASIC3.21□□□□□ -1.9
TRAPPC9Q96Q05 PRDX4P1-201ENST00000507189 574 ntBASIC3.21□□□□□ -1.9
TRAPPC9Q96Q05 SNORA14.1-201ENST00000516113 141 ntBASIC3.21□□□□□ -1.9
TRAPPC9Q96Q05 Y_RNA.665-201ENST00000516177 98 ntBASIC3.21□□□□□ -1.9
TRAPPC9Q96Q05 CYCSP27-201ENST00000527643 293 ntBASIC3.21□□□□□ -1.9
TRAPPC9Q96Q05 AC025281.1-201ENST00000567026 265 ntBASIC3.21□□□□□ -1.9
TRAPPC9Q96Q05 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.21□□□□□ -1.9
TRAPPC9Q96Q05 ATP1B3P1-201ENST00000605365 821 ntBASIC3.21□□□□□ -1.9
TRAPPC9Q96Q05 AC002044.1-201ENST00000606707 158 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms