Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 RNU6-960P-201ENST00000364056 120 ntBASIC1.85□□□□□ -2.11
COL21A1Q96P44 RNU6-1280P-201ENST00000365211 107 ntBASIC1.85□□□□□ -2.11
COL21A1Q96P44 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.85□□□□□ -2.11
COL21A1Q96P44 RPL37P21-201ENST00000435890 276 ntBASIC1.85□□□□□ -2.11
COL21A1Q96P44 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
COL21A1Q96P44 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.85□□□□□ -2.11
COL21A1Q96P44 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.85□□□□□ -2.11
COL21A1Q96P44 GPM6BP3-201ENST00000442797 145 ntBASIC1.85□□□□□ -2.11
COL21A1Q96P44 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.85□□□□□ -2.11
COL21A1Q96P44 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.85□□□□□ -2.11
COL21A1Q96P44 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.85□□□□□ -2.11
COL21A1Q96P44 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.85□□□□□ -2.11
COL21A1Q96P44 AC092001.1-201ENST00000453012 261 ntBASIC1.85□□□□□ -2.11
COL21A1Q96P44 MTND1P12-201ENST00000455231 147 ntBASIC1.85□□□□□ -2.11
COL21A1Q96P44 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.85□□□□□ -2.11
COL21A1Q96P44 RPL36AP48-201ENST00000485521 314 ntBASIC1.85□□□□□ -2.11
COL21A1Q96P44 AC139453.3-201ENST00000493276 369 ntBASIC1.85□□□□□ -2.11
COL21A1Q96P44 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC1.85□□□□□ -2.11
COL21A1Q96P44 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.85□□□□□ -2.11
COL21A1Q96P44 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.85□□□□□ -2.11
COL21A1Q96P44 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.85□□□□□ -2.11
COL21A1Q96P44 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
COL21A1Q96P44 RN7SKP219-201ENST00000516825 296 ntBASIC1.85□□□□□ -2.11
COL21A1Q96P44 ACA59.2-201ENST00000517061 156 ntBASIC1.85□□□□□ -2.11
COL21A1Q96P44 MRPS36P3-201ENST00000519284 130 ntBASIC1.85□□□□□ -2.11
COL21A1Q96P44 FAM92A1P1-201ENST00000528023 890 ntBASIC1.85□□□□□ -2.11
COL21A1Q96P44 AC079598.5-201ENST00000547460 117 ntBASIC1.85□□□□□ -2.11
COL21A1Q96P44 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC1.85□□□□□ -2.11
COL21A1Q96P44 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.85□□□□□ -2.11
COL21A1Q96P44 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.85□□□□□ -2.11
COL21A1Q96P44 AL031667.3-201ENST00000620124 655 ntBASIC1.85□□□□□ -2.11
COL21A1Q96P44 AC007490.1-201ENST00000624321 703 ntBASIC1.85□□□□□ -2.11
COL21A1Q96P44 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
COL21A1Q96P44 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
COL21A1Q96P44 AC131280.1-202ENST00000624067 4211 ntBASIC1.84□□□□□ -2.11
COL21A1Q96P44 Z75746.1-201ENST00000440243 2080 ntBASIC1.84□□□□□ -2.11
COL21A1Q96P44 AC092104.1-201ENST00000497346 1441 ntBASIC1.84□□□□□ -2.11
COL21A1Q96P44 AL391994.1-201ENST00000254724 282 ntBASIC1.84□□□□□ -2.11
COL21A1Q96P44 RNU5E-6P-201ENST00000365574 115 ntBASIC1.84□□□□□ -2.11
COL21A1Q96P44 Y_RNA.534-201ENST00000384599 112 ntBASIC1.84□□□□□ -2.11
COL21A1Q96P44 RNA5SP489-201ENST00000410986 109 ntBASIC1.84□□□□□ -2.11
COL21A1Q96P44 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.84□□□□□ -2.11
COL21A1Q96P44 AL008987.1-201ENST00000415528 237 ntBASIC1.84□□□□□ -2.11
COL21A1Q96P44 RPL22P18-201ENST00000417197 377 ntBASIC1.84□□□□□ -2.11
COL21A1Q96P44 AL109913.1-201ENST00000421173 514 ntBASIC1.84□□□□□ -2.11
COL21A1Q96P44 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.84□□□□□ -2.11
COL21A1Q96P44 XKRYP1-201ENST00000423438 492 ntBASIC1.84□□□□□ -2.11
COL21A1Q96P44 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.84□□□□□ -2.11
COL21A1Q96P44 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.84□□□□□ -2.11
COL21A1Q96P44 XKRYP2-201ENST00000432915 492 ntBASIC1.84□□□□□ -2.11
COL21A1Q96P44 AL451074.3-201ENST00000437709 472 ntBASIC1.84□□□□□ -2.11
COL21A1Q96P44 AC004383.1-201ENST00000438135 289 ntBASIC1.84□□□□□ -2.11
COL21A1Q96P44 RPS15AP9-201ENST00000439856 381 ntBASIC1.84□□□□□ -2.11
COL21A1Q96P44 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.84□□□□□ -2.11
COL21A1Q96P44 AL078601.1-201ENST00000444542 271 ntBASIC1.84□□□□□ -2.11
COL21A1Q96P44 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.84□□□□□ -2.11
COL21A1Q96P44 RPL38P4-201ENST00000502376 214 ntBASIC1.84□□□□□ -2.11
COL21A1Q96P44 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.84□□□□□ -2.11
COL21A1Q96P44 AC116655.1-201ENST00000508324 901 ntBASIC1.84□□□□□ -2.11
COL21A1Q96P44 RNU6-572P-201ENST00000516724 80 ntBASIC1.84□□□□□ -2.11
COL21A1Q96P44 Y_RNA.717-201ENST00000517106 92 ntBASIC1.84□□□□□ -2.11
COL21A1Q96P44 RNU6-1315P-201ENST00000517187 99 ntBASIC1.84□□□□□ -2.11
COL21A1Q96P44 AC009902.1-201ENST00000519351 183 ntBASIC1.84□□□□□ -2.11
COL21A1Q96P44 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.84□□□□□ -2.11
COL21A1Q96P44 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.84□□□□□ -2.11
COL21A1Q96P44 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.84□□□□□ -2.11
COL21A1Q96P44 AC002400.1-201ENST00000569310 726 ntBASIC1.84□□□□□ -2.11
COL21A1Q96P44 AL354943.1-201ENST00000572103 781 ntBASIC1.84□□□□□ -2.11
COL21A1Q96P44 MIR5089-201ENST00000580047 84 ntBASIC1.84□□□□□ -2.11
COL21A1Q96P44 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.84□□□□□ -2.11
COL21A1Q96P44 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.84□□□□□ -2.11
COL21A1Q96P44 MIR4999-201ENST00000585029 91 ntBASIC1.84□□□□□ -2.11
COL21A1Q96P44 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
COL21A1Q96P44 AC022022.2-201ENST00000602989 360 ntBASIC1.84□□□□□ -2.11
COL21A1Q96P44 AC093424.1-201ENST00000604999 338 ntBASIC1.84□□□□□ -2.11
COL21A1Q96P44 AC096772.1-201ENST00000609146 564 ntBASIC1.84□□□□□ -2.11
COL21A1Q96P44 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.84□□□□□ -2.11
COL21A1Q96P44 AL161423.1-201ENST00000613700 262 ntBASIC1.84□□□□□ -2.11
COL21A1Q96P44 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.84□□□□□ -2.12
COL21A1Q96P44 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.84□□□□□ -2.12
COL21A1Q96P44 ZNF355P-201ENST00000427301 3216 ntBASIC1.84□□□□□ -2.12
COL21A1Q96P44 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
COL21A1Q96P44 Y_RNA.40-201ENST00000362645 93 ntBASIC1.83□□□□□ -2.12
COL21A1Q96P44 Y_RNA.140-201ENST00000363474 103 ntBASIC1.83□□□□□ -2.12
COL21A1Q96P44 RNU6-288P-201ENST00000363690 104 ntBASIC1.83□□□□□ -2.12
COL21A1Q96P44 RNU4-28P-201ENST00000364739 141 ntBASIC1.83□□□□□ -2.12
COL21A1Q96P44 RNU6-395P-201ENST00000365662 106 ntBASIC1.83□□□□□ -2.12
COL21A1Q96P44 U8.14-201ENST00000390843 143 ntBASIC1.83□□□□□ -2.12
COL21A1Q96P44 SNORD115.1-201ENST00000391109 76 ntBASIC1.83□□□□□ -2.12
COL21A1Q96P44 SNORA40C-201ENST00000391285 128 ntBASIC1.83□□□□□ -2.12
COL21A1Q96P44 RPS20P2-201ENST00000402520 389 ntBASIC1.83□□□□□ -2.12
COL21A1Q96P44 AC127391.1-201ENST00000411737 98 ntBASIC1.83□□□□□ -2.12
COL21A1Q96P44 AL356379.1-201ENST00000414105 126 ntBASIC1.83□□□□□ -2.12
COL21A1Q96P44 OR51A5P-201ENST00000415429 942 ntBASIC1.83□□□□□ -2.12
COL21A1Q96P44 HIGD1AP15-201ENST00000416198 280 ntBASIC1.83□□□□□ -2.12
COL21A1Q96P44 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.83□□□□□ -2.12
COL21A1Q96P44 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.83□□□□□ -2.12
COL21A1Q96P44 AL591212.2-201ENST00000433923 257 ntBASIC1.83□□□□□ -2.12
COL21A1Q96P44 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.83□□□□□ -2.12
COL21A1Q96P44 AL354941.1-201ENST00000438600 464 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms