Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AC027449.1-201ENST00000608890 407 ntBASIC2.09□□□□□ -2.07
RPRD1AQ96P16 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.09□□□□□ -2.07
RPRD1AQ96P16 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.09□□□□□ -2.07
RPRD1AQ96P16 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.09□□□□□ -2.08
RPRD1AQ96P16 AL445523.1-201ENST00000451184 1362 ntBASIC2.09□□□□□ -2.08
RPRD1AQ96P16 HSPE1P11-201ENST00000339579 310 ntBASIC2.08□□□□□ -2.08
RPRD1AQ96P16 OR56A5-201ENST00000340110 738 ntBASIC2.08□□□□□ -2.08
RPRD1AQ96P16 Y_RNA.33-201ENST00000362591 102 ntBASIC2.08□□□□□ -2.08
RPRD1AQ96P16 RNU4-28P-201ENST00000364739 141 ntBASIC2.08□□□□□ -2.08
RPRD1AQ96P16 RNU6-533P-201ENST00000384144 107 ntBASIC2.08□□□□□ -2.08
RPRD1AQ96P16 GSTA9P-201ENST00000406231 611 ntBASIC2.08□□□□□ -2.08
RPRD1AQ96P16 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.08□□□□□ -2.08
RPRD1AQ96P16 AC006366.1-201ENST00000422002 759 ntBASIC2.08□□□□□ -2.08
RPRD1AQ96P16 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.08□□□□□ -2.08
RPRD1AQ96P16 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.08□□□□□ -2.08
RPRD1AQ96P16 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.08□□□□□ -2.08
RPRD1AQ96P16 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.08□□□□□ -2.08
RPRD1AQ96P16 RPL7P43-201ENST00000478876 753 ntBASIC2.08□□□□□ -2.08
RPRD1AQ96P16 AC007182.2-201ENST00000489251 402 ntBASIC2.08□□□□□ -2.08
RPRD1AQ96P16 RNU2-19P-201ENST00000517288 84 ntBASIC2.08□□□□□ -2.08
RPRD1AQ96P16 AC118273.2-201ENST00000532092 465 ntBASIC2.08□□□□□ -2.08
RPRD1AQ96P16 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.08□□□□□ -2.08
RPRD1AQ96P16 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.08□□□□□ -2.08
RPRD1AQ96P16 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.08□□□□□ -2.08
RPRD1AQ96P16 AC025678.1-201ENST00000567861 338 ntBASIC2.08□□□□□ -2.08
RPRD1AQ96P16 MIR1273C-201ENST00000578669 77 ntBASIC2.08□□□□□ -2.08
RPRD1AQ96P16 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.08□□□□□ -2.08
RPRD1AQ96P16 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.08□□□□□ -2.08
RPRD1AQ96P16 AL670379.10-201ENST00000604330 253 ntBASIC2.08□□□□□ -2.08
RPRD1AQ96P16 AL670379.9-201ENST00000605428 253 ntBASIC2.08□□□□□ -2.08
RPRD1AQ96P16 AC068276.1-201ENST00000605793 379 ntBASIC2.08□□□□□ -2.08
RPRD1AQ96P16 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
RPRD1AQ96P16 AC091932.3-201ENST00000624223 323 ntBASIC2.08□□□□□ -2.08
RPRD1AQ96P16 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
RPRD1AQ96P16 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.08□□□□□ -2.08
RPRD1AQ96P16 SNORD114-1-201ENST00000362705 72 ntBASIC2.07□□□□□ -2.08
RPRD1AQ96P16 RNU5F-6P-201ENST00000362979 116 ntBASIC2.07□□□□□ -2.08
RPRD1AQ96P16 SNORD115.1-201ENST00000391109 76 ntBASIC2.07□□□□□ -2.08
RPRD1AQ96P16 FTH1P15-201ENST00000406984 280 ntBASIC2.07□□□□□ -2.08
RPRD1AQ96P16 RNU2-2P-201ENST00000410396 191 ntBASIC2.07□□□□□ -2.08
RPRD1AQ96P16 RNU2-63P-201ENST00000410792 194 ntBASIC2.07□□□□□ -2.08
RPRD1AQ96P16 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC2.07□□□□□ -2.08
RPRD1AQ96P16 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.07□□□□□ -2.08
RPRD1AQ96P16 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.07□□□□□ -2.08
RPRD1AQ96P16 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.07□□□□□ -2.08
RPRD1AQ96P16 RPL7P34-201ENST00000433316 712 ntBASIC2.07□□□□□ -2.08
RPRD1AQ96P16 AL353706.1-201ENST00000436728 494 ntBASIC2.07□□□□□ -2.08
RPRD1AQ96P16 USP9YP8-201ENST00000441913 500 ntBASIC2.07□□□□□ -2.08
RPRD1AQ96P16 AL021397.1-201ENST00000451806 248 ntBASIC2.07□□□□□ -2.08
RPRD1AQ96P16 AC025033.1-201ENST00000463883 194 ntBASIC2.07□□□□□ -2.08
RPRD1AQ96P16 MTND2P14-201ENST00000482139 351 ntBASIC2.07□□□□□ -2.08
RPRD1AQ96P16 AC112204.1-201ENST00000502591 103 ntBASIC2.07□□□□□ -2.08
RPRD1AQ96P16 Y_RNA.689-201ENST00000516589 107 ntBASIC2.07□□□□□ -2.08
RPRD1AQ96P16 RNA5SP337-201ENST00000517007 109 ntBASIC2.07□□□□□ -2.08
RPRD1AQ96P16 AP003461.1-201ENST00000528866 78 ntBASIC2.07□□□□□ -2.08
RPRD1AQ96P16 ELOCP32-201ENST00000548625 324 ntBASIC2.07□□□□□ -2.08
RPRD1AQ96P16 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.07□□□□□ -2.08
RPRD1AQ96P16 AC012435.1-202ENST00000568772 240 ntBASIC2.07□□□□□ -2.08
RPRD1AQ96P16 AC007229.1-201ENST00000590455 412 ntBASIC2.07□□□□□ -2.08
RPRD1AQ96P16 AC008751.2-201ENST00000597885 980 ntBASIC2.07□□□□□ -2.08
RPRD1AQ96P16 AC174048.1-201ENST00000603389 144 ntBASIC2.07□□□□□ -2.08
RPRD1AQ96P16 AC009314.1-201ENST00000603871 304 ntBASIC2.07□□□□□ -2.08
RPRD1AQ96P16 AC105129.3-201ENST00000605455 485 ntBASIC2.07□□□□□ -2.08
RPRD1AQ96P16 AP000240.1-201ENST00000609910 452 ntBASIC2.07□□□□□ -2.08
RPRD1AQ96P16 U2.15-201ENST00000611544 191 ntBASIC2.07□□□□□ -2.08
RPRD1AQ96P16 U2.16-201ENST00000613119 191 ntBASIC2.07□□□□□ -2.08
RPRD1AQ96P16 U2.12-201ENST00000613778 191 ntBASIC2.07□□□□□ -2.08
RPRD1AQ96P16 U2.20-201ENST00000613956 192 ntBASIC2.07□□□□□ -2.08
RPRD1AQ96P16 U2.9-201ENST00000615427 191 ntBASIC2.07□□□□□ -2.08
RPRD1AQ96P16 U2.11-201ENST00000616345 191 ntBASIC2.07□□□□□ -2.08
RPRD1AQ96P16 U2.2-201ENST00000616535 191 ntBASIC2.07□□□□□ -2.08
RPRD1AQ96P16 U2.3-201ENST00000617785 191 ntBASIC2.07□□□□□ -2.08
RPRD1AQ96P16 U2.19-201ENST00000618602 191 ntBASIC2.07□□□□□ -2.08
RPRD1AQ96P16 RNU2-1-201ENST00000618664 191 ntBASIC2.07□□□□□ -2.08
RPRD1AQ96P16 U2.6-201ENST00000619225 191 ntBASIC2.07□□□□□ -2.08
RPRD1AQ96P16 U2.5-201ENST00000619465 191 ntBASIC2.07□□□□□ -2.08
RPRD1AQ96P16 U2.10-201ENST00000620268 191 ntBASIC2.07□□□□□ -2.08
RPRD1AQ96P16 uc_338.20-201ENST00000621563 178 ntBASIC2.07□□□□□ -2.08
RPRD1AQ96P16 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
RPRD1AQ96P16 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
RPRD1AQ96P16 MTND4P1-201ENST00000457501 1466 ntBASIC2.07□□□□□ -2.08
RPRD1AQ96P16 AC008555.8-201ENST00000623602 2168 ntBASIC2.06□□□□□ -2.08
RPRD1AQ96P16 RNU6-1214P-201ENST00000363650 109 ntBASIC2.06□□□□□ -2.08
RPRD1AQ96P16 RNA5SP160-201ENST00000364866 120 ntBASIC2.06□□□□□ -2.08
RPRD1AQ96P16 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
RPRD1AQ96P16 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.06□□□□□ -2.08
RPRD1AQ96P16 AC016831.2-201ENST00000417179 352 ntBASIC2.06□□□□□ -2.08
RPRD1AQ96P16 AL365184.2-201ENST00000431139 435 ntBASIC2.06□□□□□ -2.08
RPRD1AQ96P16 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC2.06□□□□□ -2.08
RPRD1AQ96P16 AC068587.2-201ENST00000478386 781 ntBASIC2.06□□□□□ -2.08
RPRD1AQ96P16 AC140059.1-201ENST00000489238 361 ntBASIC2.06□□□□□ -2.08
RPRD1AQ96P16 YWHAEP4-201ENST00000505390 198 ntBASIC2.06□□□□□ -2.08
RPRD1AQ96P16 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.06□□□□□ -2.08
RPRD1AQ96P16 AF131216.2-201ENST00000512316 564 ntBASIC2.06□□□□□ -2.08
RPRD1AQ96P16 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.06□□□□□ -2.08
RPRD1AQ96P16 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.06□□□□□ -2.08
RPRD1AQ96P16 AC011979.2-201ENST00000527568 352 ntBASIC2.06□□□□□ -2.08
RPRD1AQ96P16 OR5B19P-201ENST00000531766 928 ntBASIC2.06□□□□□ -2.08
RPRD1AQ96P16 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC2.06□□□□□ -2.08
RPRD1AQ96P16 AL109918.3-201ENST00000603072 338 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms