Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 SNORA80E-201ENST00000384744 137 ntBASIC2.42□□□□□ -2.02
ZNF560Q96MR9 AL591416.1-201ENST00000404015 867 ntBASIC2.42□□□□□ -2.02
ZNF560Q96MR9 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.42□□□□□ -2.02
ZNF560Q96MR9 AC009518.2-201ENST00000418056 731 ntBASIC2.42□□□□□ -2.02
ZNF560Q96MR9 AL353621.1-201ENST00000418219 243 ntBASIC2.42□□□□□ -2.02
ZNF560Q96MR9 AC097463.2-201ENST00000421074 142 ntBASIC2.42□□□□□ -2.02
ZNF560Q96MR9 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.42□□□□□ -2.02
ZNF560Q96MR9 AC018634.1-201ENST00000437554 401 ntBASIC2.42□□□□□ -2.02
ZNF560Q96MR9 AL136380.1-201ENST00000447970 162 ntBASIC2.42□□□□□ -2.02
ZNF560Q96MR9 NDUFB1P2-201ENST00000449477 176 ntBASIC2.42□□□□□ -2.02
ZNF560Q96MR9 AL139109.1-201ENST00000455491 297 ntBASIC2.42□□□□□ -2.02
ZNF560Q96MR9 RPL36AP48-201ENST00000485521 314 ntBASIC2.42□□□□□ -2.02
ZNF560Q96MR9 AC022493.1-201ENST00000492984 337 ntBASIC2.42□□□□□ -2.02
ZNF560Q96MR9 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.42□□□□□ -2.02
ZNF560Q96MR9 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.42□□□□□ -2.02
ZNF560Q96MR9 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.42□□□□□ -2.02
ZNF560Q96MR9 OR5AQ1P-201ENST00000527596 927 ntBASIC2.42□□□□□ -2.02
ZNF560Q96MR9 SNRPGP18-201ENST00000553000 214 ntBASIC2.42□□□□□ -2.02
ZNF560Q96MR9 AC121758.2-201ENST00000553271 193 ntBASIC2.42□□□□□ -2.02
ZNF560Q96MR9 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.42□□□□□ -2.02
ZNF560Q96MR9 AC145350.1-201ENST00000567426 208 ntBASIC2.42□□□□□ -2.02
ZNF560Q96MR9 AC012213.3-201ENST00000577199 777 ntBASIC2.42□□□□□ -2.02
ZNF560Q96MR9 MIR1273D-201ENST00000577266 86 ntBASIC2.42□□□□□ -2.02
ZNF560Q96MR9 AL670379.10-201ENST00000604330 253 ntBASIC2.42□□□□□ -2.02
ZNF560Q96MR9 AL158032.1-201ENST00000605401 106 ntBASIC2.42□□□□□ -2.02
ZNF560Q96MR9 AL670379.9-201ENST00000605428 253 ntBASIC2.42□□□□□ -2.02
ZNF560Q96MR9 AC126118.1-201ENST00000607744 628 ntBASIC2.42□□□□□ -2.02
ZNF560Q96MR9 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.42□□□□□ -2.02
ZNF560Q96MR9 MIR6132-201ENST00000622083 109 ntBASIC2.42□□□□□ -2.02
ZNF560Q96MR9 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
ZNF560Q96MR9 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
ZNF560Q96MR9 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.41□□□□□ -2.02
ZNF560Q96MR9 RNU4-21P-201ENST00000362802 126 ntBASIC2.41□□□□□ -2.02
ZNF560Q96MR9 RNU6-641P-201ENST00000384006 107 ntBASIC2.41□□□□□ -2.02
ZNF560Q96MR9 SNORA70B-201ENST00000384210 135 ntBASIC2.41□□□□□ -2.02
ZNF560Q96MR9 MIR144-201ENST00000384886 86 ntBASIC2.41□□□□□ -2.02
ZNF560Q96MR9 MIR221-201ENST00000385135 110 ntBASIC2.41□□□□□ -2.02
ZNF560Q96MR9 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.41□□□□□ -2.02
ZNF560Q96MR9 MIR1302-8-201ENST00000408342 128 ntBASIC2.41□□□□□ -2.02
ZNF560Q96MR9 Y_RNA.623-201ENST00000411128 95 ntBASIC2.41□□□□□ -2.02
ZNF560Q96MR9 AC127391.1-201ENST00000411737 98 ntBASIC2.41□□□□□ -2.02
ZNF560Q96MR9 AL160275.3-201ENST00000423876 471 ntBASIC2.41□□□□□ -2.02
ZNF560Q96MR9 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.41□□□□□ -2.02
ZNF560Q96MR9 RPS6P15-201ENST00000431996 751 ntBASIC2.41□□□□□ -2.02
ZNF560Q96MR9 RPL7P34-201ENST00000433316 712 ntBASIC2.41□□□□□ -2.02
ZNF560Q96MR9 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.41□□□□□ -2.02
ZNF560Q96MR9 AC104850.1-201ENST00000435940 476 ntBASIC2.41□□□□□ -2.02
ZNF560Q96MR9 AL353705.4-201ENST00000449661 238 ntBASIC2.41□□□□□ -2.02
ZNF560Q96MR9 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.41□□□□□ -2.02
ZNF560Q96MR9 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2.41□□□□□ -2.02
ZNF560Q96MR9 snoU109.1-201ENST00000459339 135 ntBASIC2.41□□□□□ -2.02
ZNF560Q96MR9 RN7SL429P-201ENST00000479090 223 ntBASIC2.41□□□□□ -2.02
ZNF560Q96MR9 RN7SL489P-201ENST00000486185 223 ntBASIC2.41□□□□□ -2.02
ZNF560Q96MR9 RN7SL327P-201ENST00000488659 223 ntBASIC2.41□□□□□ -2.02
ZNF560Q96MR9 MIR892C-201ENST00000516410 77 ntBASIC2.41□□□□□ -2.02
ZNF560Q96MR9 Vault.3-201ENST00000516676 95 ntBASIC2.41□□□□□ -2.02
ZNF560Q96MR9 FAM92A1P1-201ENST00000528023 890 ntBASIC2.41□□□□□ -2.02
ZNF560Q96MR9 AC079598.5-201ENST00000547460 117 ntBASIC2.41□□□□□ -2.02
ZNF560Q96MR9 AC026464.5-201ENST00000562497 722 ntBASIC2.41□□□□□ -2.02
ZNF560Q96MR9 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
ZNF560Q96MR9 NIFKP6-201ENST00000598115 845 ntBASIC2.41□□□□□ -2.02
ZNF560Q96MR9 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.41□□□□□ -2.02
ZNF560Q96MR9 AL133173.2-201ENST00000614270 90 ntBASIC2.41□□□□□ -2.02
ZNF560Q96MR9 RN7SL853P-201ENST00000617250 223 ntBASIC2.41□□□□□ -2.02
ZNF560Q96MR9 Z75746.1-201ENST00000440243 2080 ntBASIC2.41□□□□□ -2.02
ZNF560Q96MR9 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
ZNF560Q96MR9 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
ZNF560Q96MR9 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
ZNF560Q96MR9 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
ZNF560Q96MR9 AC138393.1-203ENST00000327086 343 ntBASIC2.4□□□□□ -2.03
ZNF560Q96MR9 RNU6-169P-201ENST00000365336 107 ntBASIC2.4□□□□□ -2.03
ZNF560Q96MR9 RNU1-52P-201ENST00000384190 164 ntBASIC2.4□□□□□ -2.03
ZNF560Q96MR9 MT-TH-201ENST00000387441 69 ntBASIC2.4□□□□□ -2.03
ZNF560Q96MR9 CIR1P3-201ENST00000405137 479 ntBASIC2.4□□□□□ -2.03
ZNF560Q96MR9 RN7SKP223-201ENST00000410582 62 ntBASIC2.4□□□□□ -2.03
ZNF560Q96MR9 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.4□□□□□ -2.03
ZNF560Q96MR9 AL365338.1-201ENST00000422282 858 ntBASIC2.4□□□□□ -2.03
ZNF560Q96MR9 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.4□□□□□ -2.03
ZNF560Q96MR9 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.4□□□□□ -2.03
ZNF560Q96MR9 AL627311.1-201ENST00000431514 115 ntBASIC2.4□□□□□ -2.03
ZNF560Q96MR9 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.4□□□□□ -2.03
ZNF560Q96MR9 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.4□□□□□ -2.03
ZNF560Q96MR9 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
ZNF560Q96MR9 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.4□□□□□ -2.03
ZNF560Q96MR9 AL033528.1-201ENST00000453780 140 ntBASIC2.4□□□□□ -2.03
ZNF560Q96MR9 AL583843.1-201ENST00000456070 346 ntBASIC2.4□□□□□ -2.03
ZNF560Q96MR9 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.4□□□□□ -2.03
ZNF560Q96MR9 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC2.4□□□□□ -2.03
ZNF560Q96MR9 DYNLL1P5-201ENST00000467158 270 ntBASIC2.4□□□□□ -2.03
ZNF560Q96MR9 AC008526.1-201ENST00000509149 338 ntBASIC2.4□□□□□ -2.03
ZNF560Q96MR9 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.4□□□□□ -2.03
ZNF560Q96MR9 RNU6-123P-201ENST00000516163 102 ntBASIC2.4□□□□□ -2.03
ZNF560Q96MR9 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.4□□□□□ -2.03
ZNF560Q96MR9 AP005902.1-201ENST00000521358 186 ntBASIC2.4□□□□□ -2.03
ZNF560Q96MR9 PRELID2P1-201ENST00000552837 301 ntBASIC2.4□□□□□ -2.03
ZNF560Q96MR9 AC092325.1-201ENST00000566449 554 ntBASIC2.4□□□□□ -2.03
ZNF560Q96MR9 AC109446.2-201ENST00000567872 497 ntBASIC2.4□□□□□ -2.03
ZNF560Q96MR9 AC007336.1-201ENST00000576365 3828 ntBASIC2.4□□□□□ -2.03
ZNF560Q96MR9 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.4□□□□□ -2.03
ZNF560Q96MR9 AL138889.2-201ENST00000603883 242 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms