Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 SNORA40C-201ENST00000391285 128 ntBASIC3.65□□□□□ -1.83
CDK5RAP3Q96JB5 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.83
CDK5RAP3Q96JB5 RNU2-3P-201ENST00000410144 191 ntBASIC3.65□□□□□ -1.83
CDK5RAP3Q96JB5 RNA5SP31-201ENST00000411144 127 ntBASIC3.65□□□□□ -1.83
CDK5RAP3Q96JB5 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.65□□□□□ -1.83
CDK5RAP3Q96JB5 AL592148.1-201ENST00000413568 445 ntBASIC3.65□□□□□ -1.83
CDK5RAP3Q96JB5 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.65□□□□□ -1.83
CDK5RAP3Q96JB5 AL353705.1-201ENST00000433468 480 ntBASIC3.65□□□□□ -1.83
CDK5RAP3Q96JB5 BRK1P2-201ENST00000442875 223 ntBASIC3.65□□□□□ -1.83
CDK5RAP3Q96JB5 TRBVA-201ENST00000498804 316 ntBASIC3.65□□□□□ -1.83
CDK5RAP3Q96JB5 AC110794.1-201ENST00000505816 425 ntBASIC3.65□□□□□ -1.83
CDK5RAP3Q96JB5 AC079140.5-201ENST00000507882 310 ntBASIC3.65□□□□□ -1.83
CDK5RAP3Q96JB5 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.65□□□□□ -1.83
CDK5RAP3Q96JB5 RNU6-256P-201ENST00000516747 97 ntBASIC3.65□□□□□ -1.83
CDK5RAP3Q96JB5 RN7SKP282-201ENST00000516824 299 ntBASIC3.65□□□□□ -1.83
CDK5RAP3Q96JB5 SNORA25.17-201ENST00000517184 124 ntBASIC3.65□□□□□ -1.83
CDK5RAP3Q96JB5 AP000889.2-201ENST00000532684 490 ntBASIC3.65□□□□□ -1.83
CDK5RAP3Q96JB5 H3F3AP1-201ENST00000559984 334 ntBASIC3.65□□□□□ -1.83
CDK5RAP3Q96JB5 RPS3AP23-202ENST00000574601 686 ntBASIC3.65□□□□□ -1.83
CDK5RAP3Q96JB5 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.65□□□□□ -1.83
CDK5RAP3Q96JB5 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.65□□□□□ -1.83
CDK5RAP3Q96JB5 AL022345.1-201ENST00000607292 135 ntBASIC3.65□□□□□ -1.83
CDK5RAP3Q96JB5 AL161629.2-201ENST00000615347 275 ntBASIC3.65□□□□□ -1.83
CDK5RAP3Q96JB5 AC084757.4-201ENST00000616350 526 ntBASIC3.65□□□□□ -1.83
CDK5RAP3Q96JB5 MIR6075-201ENST00000620782 95 ntBASIC3.65□□□□□ -1.83
CDK5RAP3Q96JB5 AC091903.1-201ENST00000624322 454 ntBASIC3.65□□□□□ -1.83
CDK5RAP3Q96JB5 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.65□□□□□ -1.83
CDK5RAP3Q96JB5 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CDK5RAP3Q96JB5 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
CDK5RAP3Q96JB5 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CDK5RAP3Q96JB5 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.64□□□□□ -1.83
CDK5RAP3Q96JB5 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CDK5RAP3Q96JB5 FAM35CP-201ENST00000554755 2470 ntBASIC3.64□□□□□ -1.83
CDK5RAP3Q96JB5 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.64□□□□□ -1.83
CDK5RAP3Q96JB5 Y_RNA.301-201ENST00000364990 103 ntBASIC3.64□□□□□ -1.83
CDK5RAP3Q96JB5 Y_RNA.324-201ENST00000365165 102 ntBASIC3.64□□□□□ -1.83
CDK5RAP3Q96JB5 RNU6-1027P-201ENST00000383998 107 ntBASIC3.64□□□□□ -1.83
CDK5RAP3Q96JB5 Y_RNA.623-201ENST00000411128 95 ntBASIC3.64□□□□□ -1.83
CDK5RAP3Q96JB5 VN1R36P-201ENST00000414936 291 ntBASIC3.64□□□□□ -1.83
CDK5RAP3Q96JB5 AC245291.1-201ENST00000419501 328 ntBASIC3.64□□□□□ -1.83
CDK5RAP3Q96JB5 AC099548.1-201ENST00000421443 426 ntBASIC3.64□□□□□ -1.83
CDK5RAP3Q96JB5 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.64□□□□□ -1.83
CDK5RAP3Q96JB5 HMGN2P30-201ENST00000423237 256 ntBASIC3.64□□□□□ -1.83
CDK5RAP3Q96JB5 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.64□□□□□ -1.83
CDK5RAP3Q96JB5 AC098614.2-201ENST00000426040 255 ntBASIC3.64□□□□□ -1.83
CDK5RAP3Q96JB5 HMGB1P18-201ENST00000438801 619 ntBASIC3.64□□□□□ -1.83
CDK5RAP3Q96JB5 AL078601.1-201ENST00000444542 271 ntBASIC3.64□□□□□ -1.83
CDK5RAP3Q96JB5 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.64□□□□□ -1.83
CDK5RAP3Q96JB5 AC092798.1-201ENST00000458542 409 ntBASIC3.64□□□□□ -1.83
CDK5RAP3Q96JB5 RNU1-103P-201ENST00000516502 125 ntBASIC3.64□□□□□ -1.83
CDK5RAP3Q96JB5 SNORA64.4-201ENST00000516632 81 ntBASIC3.64□□□□□ -1.83
CDK5RAP3Q96JB5 AC069113.1-201ENST00000517763 267 ntBASIC3.64□□□□□ -1.83
CDK5RAP3Q96JB5 AC105029.1-201ENST00000520250 669 ntBASIC3.64□□□□□ -1.83
CDK5RAP3Q96JB5 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.64□□□□□ -1.83
CDK5RAP3Q96JB5 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.64□□□□□ -1.83
CDK5RAP3Q96JB5 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.64□□□□□ -1.83
CDK5RAP3Q96JB5 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.64□□□□□ -1.83
CDK5RAP3Q96JB5 MIR3672-201ENST00000584290 82 ntBASIC3.64□□□□□ -1.83
CDK5RAP3Q96JB5 AL117336.2-201ENST00000602435 335 ntBASIC3.64□□□□□ -1.83
CDK5RAP3Q96JB5 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.64□□□□□ -1.83
CDK5RAP3Q96JB5 FAM157A-202ENST00000615155 405 ntBASIC3.64□□□□□ -1.83
CDK5RAP3Q96JB5 uc_338.15-201ENST00000615470 191 ntBASIC3.64□□□□□ -1.83
CDK5RAP3Q96JB5 RMST_4.1-201ENST00000616886 107 ntBASIC3.64□□□□□ -1.83
CDK5RAP3Q96JB5 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.64□□□□□ -1.83
CDK5RAP3Q96JB5 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
CDK5RAP3Q96JB5 AC112487.2-201ENST00000637950 304 ntBASIC3.64□□□□□ -1.83
CDK5RAP3Q96JB5 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
CDK5RAP3Q96JB5 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.64□□□□□ -1.83
CDK5RAP3Q96JB5 AC093010.3-201ENST00000570269 15214 ntBASIC3.63□□□□□ -1.83
CDK5RAP3Q96JB5 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.63□□□□□ -1.83
CDK5RAP3Q96JB5 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.63□□□□□ -1.83
CDK5RAP3Q96JB5 AC138393.1-203ENST00000327086 343 ntBASIC3.63□□□□□ -1.83
CDK5RAP3Q96JB5 SNORA71.3-201ENST00000362582 128 ntBASIC3.63□□□□□ -1.83
CDK5RAP3Q96JB5 RNA5SP72-201ENST00000364442 117 ntBASIC3.63□□□□□ -1.83
CDK5RAP3Q96JB5 SNORD14B-201ENST00000364533 90 ntBASIC3.63□□□□□ -1.83
CDK5RAP3Q96JB5 RNU6-384P-201ENST00000364900 104 ntBASIC3.63□□□□□ -1.83
CDK5RAP3Q96JB5 RNU6-166P-201ENST00000384371 107 ntBASIC3.63□□□□□ -1.83
CDK5RAP3Q96JB5 MIR23B-201ENST00000384832 97 ntBASIC3.63□□□□□ -1.83
CDK5RAP3Q96JB5 AL356057.2-201ENST00000403318 432 ntBASIC3.63□□□□□ -1.83
CDK5RAP3Q96JB5 RNA5SP229-201ENST00000410809 99 ntBASIC3.63□□□□□ -1.83
CDK5RAP3Q96JB5 PGBD4P6-201ENST00000421501 610 ntBASIC3.63□□□□□ -1.83
CDK5RAP3Q96JB5 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.63□□□□□ -1.83
CDK5RAP3Q96JB5 AL627311.1-201ENST00000431514 115 ntBASIC3.63□□□□□ -1.83
CDK5RAP3Q96JB5 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.63□□□□□ -1.83
CDK5RAP3Q96JB5 AC011005.2-201ENST00000487324 359 ntBASIC3.63□□□□□ -1.83
CDK5RAP3Q96JB5 RNU6-1088P-201ENST00000516850 104 ntBASIC3.63□□□□□ -1.83
CDK5RAP3Q96JB5 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.63□□□□□ -1.83
CDK5RAP3Q96JB5 MIR4444-1-201ENST00000581696 74 ntBASIC3.63□□□□□ -1.83
CDK5RAP3Q96JB5 MIR4444-2-201ENST00000584390 74 ntBASIC3.63□□□□□ -1.83
CDK5RAP3Q96JB5 C8orf59P2-201ENST00000603441 271 ntBASIC3.63□□□□□ -1.83
CDK5RAP3Q96JB5 AC069234.5-201ENST00000611056 416 ntBASIC3.63□□□□□ -1.83
CDK5RAP3Q96JB5 MIR7975-201ENST00000619350 68 ntBASIC3.63□□□□□ -1.83
CDK5RAP3Q96JB5 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.63□□□□□ -1.83
CDK5RAP3Q96JB5 AC073476.4-201ENST00000628409 72 ntBASIC3.63□□□□□ -1.83
CDK5RAP3Q96JB5 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDK5RAP3Q96JB5 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.63□□□□□ -1.83
CDK5RAP3Q96JB5 RNU6-658P-201ENST00000384606 106 ntBASIC3.62□□□□□ -1.83
CDK5RAP3Q96JB5 MIR10A-201ENST00000385043 110 ntBASIC3.62□□□□□ -1.83
CDK5RAP3Q96JB5 U3.19-201ENST00000390893 196 ntBASIC3.62□□□□□ -1.83
CDK5RAP3Q96JB5 MIR888-201ENST00000401186 77 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms