| PGAP3 | Q96FM1 | NUP35P1-201 | ENST00000422734 | 947 nt | BASIC | 2.73 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | AL596276.1-201 | ENST00000434465 | 418 nt | BASIC | 2.73 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | AC004869.2-201 | ENST00000436501 | 229 nt | TSL 3 BASIC | 2.73 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | AC004383.1-201 | ENST00000438135 | 289 nt | BASIC | 2.73 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | AC104389.3-201 | ENST00000445629 | 235 nt | BASIC | 2.73 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | AC132479.1-201 | ENST00000449160 | 144 nt | BASIC | 2.73 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | GSTA11P-201 | ENST00000452866 | 669 nt | BASIC | 2.73 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | OFD1P4Y-201 | ENST00000455273 | 1179 nt | BASIC | 2.73 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | AC006026.2-201 | ENST00000457376 | 180 nt | BASIC | 2.73 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | UMAD1-204 | ENST00000482067 | 569 nt | TSL 5 BASIC | 2.73 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | PLCXD2-AS1-201 | ENST00000493131 | 491 nt | TSL 3 BASIC | 2.73 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | AC020703.1-201 | ENST00000505051 | 521 nt | TSL 3 BASIC | 2.73 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | AC005920.2-201 | ENST00000509833 | 332 nt | TSL 3 BASIC | 2.73 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | AC096725.1-201 | ENST00000514266 | 313 nt | BASIC | 2.73 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | AP004607.1-201 | ENST00000524456 | 203 nt | BASIC | 2.73 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | AC124657.1-201 | ENST00000527819 | 429 nt | TSL 3 BASIC | 2.73 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | AL136146.2-201 | ENST00000534594 | 494 nt | TSL 2 BASIC | 2.73 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | LINC02305-201 | ENST00000554142 | 476 nt | TSL 3 BASIC | 2.73 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | AL512791.1-201 | ENST00000555853 | 300 nt | TSL 3 BASIC | 2.73 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | SUB1P2-201 | ENST00000556401 | 297 nt | BASIC | 2.73 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | LINC2194-202 | ENST00000567624 | 506 nt | TSL 3 BASIC | 2.73 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | PIGPP4-201 | ENST00000584447 | 307 nt | BASIC | 2.73 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | AL021997.1-201 | ENST00000605757 | 193 nt | BASIC | 2.73 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | AC098614.4-201 | ENST00000607601 | 462 nt | BASIC | 2.73 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | ZMYM1-203 | ENST00000373330 | 4203 nt | APPRIS P1 TSL 1 (best) BASIC | 2.73 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | EFCAB3-202 | ENST00000450662 | 1694 nt | TSL 5 BASIC | 2.73 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | CACNB4-238 | ENST00000636901 | 7706 nt | TSL 5 BASIC | 2.72 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | PIK3CA-201 | ENST00000263967 | 9093 nt | APPRIS P1 TSL 2 BASIC | 2.72 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | HSPA8P4-201 | ENST00000511877 | 1920 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | RNU6-371P-201 | ENST00000364283 | 108 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | CYLC2-201 | ENST00000374798 | 2171 nt | APPRIS P1 TSL 1 (best) BASIC | 2.72 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | RNU6-606P-201 | ENST00000384721 | 111 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | MIR592-201 | ENST00000384959 | 97 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | RNU6-550P-201 | ENST00000391057 | 101 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | RNU4-46P-201 | ENST00000410818 | 138 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | AC016831.2-201 | ENST00000417179 | 352 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | BX276092.3-201 | ENST00000424182 | 230 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | AL353612.1-201 | ENST00000428769 | 465 nt | TSL 3 BASIC | 2.72 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | MTCO2P11-201 | ENST00000431069 | 680 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | AC236972.1-201 | ENST00000433225 | 199 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | KCNJ6-AS1-201 | ENST00000435001 | 357 nt | TSL 5 BASIC | 2.72 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | HIGD1AP2-201 | ENST00000446367 | 280 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | AL360271.2-201 | ENST00000447710 | 161 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | AL138900.1-201 | ENST00000449345 | 399 nt | TSL 3 BASIC | 2.72 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | EEF1B2P7-201 | ENST00000451177 | 676 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | AC012308.1-201 | ENST00000451232 | 178 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | TSPY5P-202 | ENST00000456541 | 142 nt | TSL 3 BASIC | 2.72 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | RPL9P33-201 | ENST00000484311 | 566 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | AC079382.1-201 | ENST00000493346 | 557 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | AC079140.3-201 | ENST00000511111 | 550 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | AC105999.1-201 | ENST00000518722 | 473 nt | TSL 3 BASIC | 2.72 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | AC243972.3-201 | ENST00000539655 | 198 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | IGKV1-33-202 | ENST00000558152 | 324 nt | APPRIS ALT2 TSL 5 BASIC | 2.72 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | AC141273.1-201 | ENST00000565300 | 479 nt | TSL 5 BASIC | 2.72 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | MIR4319-201 | ENST00000577285 | 85 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | AC008945.2-201 | ENST00000606056 | 604 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | AC069294.1-201 | ENST00000608397 | 350 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | IGKV1D-33-202 | ENST00000611734 | 324 nt | APPRIS ALT2 TSL 5 BASIC | 2.72 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | HIKESHI-208 | ENST00000618164 | 499 nt | TSL 5 BASIC | 2.72 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | AC138627.2-201 | ENST00000624202 | 601 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | SCARNA4-202 | ENST00000625402 | 129 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | TSLP-202 | ENST00000379706 | 2411 nt | TSL 1 (best) BASIC | 2.72 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | LIG4-203 | ENST00000442234 | 3982 nt | APPRIS P1 TSL 1 (best) BASIC | 2.72 | □□□□□ -1.97 | | |
| PGAP3 | Q96FM1 | RRAS2-211 | ENST00000537760 | 2034 nt | TSL 2 BASIC | 2.71 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | CCSAP-202 | ENST00000366686 | 4399 nt | TSL 2 BASIC | 2.71 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | RNU6-858P-201 | ENST00000362436 | 107 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | RNU6-1120P-201 | ENST00000362988 | 108 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | RNU6-1029P-201 | ENST00000384109 | 107 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | RNU6-72P-201 | ENST00000384285 | 79 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | Y_RNA.500-201 | ENST00000384466 | 111 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | MIR218-1-201 | ENST00000384999 | 110 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | FTH1P15-201 | ENST00000406984 | 280 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | U6atac.2-201 | ENST00000408644 | 118 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | RNU2-52P-201 | ENST00000410680 | 190 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | AC006150.1-201 | ENST00000412014 | 263 nt | TSL 5 BASIC | 2.71 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | AC005019.2-201 | ENST00000434321 | 359 nt | TSL 5 BASIC | 2.71 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | AL359636.3-201 | ENST00000439471 | 301 nt | TSL 2 BASIC | 2.71 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | MTND1P18-201 | ENST00000448191 | 573 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | AC108938.1-201 | ENST00000451204 | 136 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | AL109933.2-201 | ENST00000452651 | 260 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | AC080013.2-201 | ENST00000460866 | 323 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | AC004930.1-201 | ENST00000470677 | 254 nt | TSL 2 BASIC | 2.71 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | FSBP-201 | ENST00000481490 | 1158 nt | TSL 1 (best) BASIC | 2.71 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | RPL36AP48-201 | ENST00000485521 | 314 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | MRPL42P6-201 | ENST00000486397 | 371 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | AC104136.1-201 | ENST00000512969 | 394 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | AC114781.4-201 | ENST00000513707 | 639 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | RNU5B-3P-201 | ENST00000516601 | 115 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | POC1B-211 | ENST00000549504 | 581 nt | TSL 5 BASIC | 2.71 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | LINC01290-201 | ENST00000566787 | 502 nt | TSL 2 BASIC | 2.71 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | FOPNL-205 | ENST00000573429 | 646 nt | TSL 3 BASIC | 2.71 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | AC009163.5-201 | ENST00000575421 | 637 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | AC011890.2-201 | ENST00000613393 | 294 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | C17orf112-201 | ENST00000623702 | 835 nt | TSL 2 BASIC | 2.71 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | CYP3A43-217 | ENST00000631161 | 328 nt | TSL 5 BASIC | 2.71 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | FAM214A-201 | ENST00000261844 | 4217 nt | APPRIS P1 TSL 1 (best) BASIC | 2.71 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | RGS13-204 | ENST00000543215 | 1518 nt | APPRIS P1 TSL 1 (best) BASIC | 2.71 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | AC009975.1-201 | ENST00000634588 | 2698 nt | TSL 5 BASIC | 2.71 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | ARHGAP5-202 | ENST00000345122 | 9604 nt | APPRIS P3 TSL 5 BASIC | 2.71 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | WDR3-201 | ENST00000349139 | 9974 nt | APPRIS P1 TSL 1 (best) BASIC | 2.7 | □□□□□ -1.98 | | |