Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 OR56A5-201ENST00000340110 738 ntBASIC3.79□□□□□ -1.8
CHFRQ96EP1 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CHFRQ96EP1 Y_RNA.2-201ENST00000362330 96 ntBASIC3.79□□□□□ -1.8
CHFRQ96EP1 Y_RNA.20-201ENST00000362479 113 ntBASIC3.79□□□□□ -1.8
CHFRQ96EP1 Y_RNA.274-201ENST00000364714 101 ntBASIC3.79□□□□□ -1.8
CHFRQ96EP1 RNA5SP235-201ENST00000365411 114 ntBASIC3.79□□□□□ -1.8
CHFRQ96EP1 RNU5E-6P-201ENST00000365574 115 ntBASIC3.79□□□□□ -1.8
CHFRQ96EP1 AL136372.1-201ENST00000403060 228 ntBASIC3.79□□□□□ -1.8
CHFRQ96EP1 RNU4-78P-201ENST00000410940 126 ntBASIC3.79□□□□□ -1.8
CHFRQ96EP1 AC096664.2-201ENST00000411843 406 ntBASIC3.79□□□□□ -1.8
CHFRQ96EP1 RPL30P2-201ENST00000414021 291 ntBASIC3.79□□□□□ -1.8
CHFRQ96EP1 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.79□□□□□ -1.8
CHFRQ96EP1 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.79□□□□□ -1.8
CHFRQ96EP1 AL158071.1-201ENST00000430315 461 ntBASIC3.79□□□□□ -1.8
CHFRQ96EP1 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.79□□□□□ -1.8
CHFRQ96EP1 snoU13.8-201ENST00000458890 104 ntBASIC3.79□□□□□ -1.8
CHFRQ96EP1 U3.44-201ENST00000458938 192 ntBASIC3.79□□□□□ -1.8
CHFRQ96EP1 RN7SL330P-201ENST00000469709 307 ntBASIC3.79□□□□□ -1.8
CHFRQ96EP1 AC010285.1-201ENST00000470580 392 ntBASIC3.79□□□□□ -1.8
CHFRQ96EP1 AL136126.1-201ENST00000473603 402 ntBASIC3.79□□□□□ -1.8
CHFRQ96EP1 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.79□□□□□ -1.8
CHFRQ96EP1 AC108860.1-201ENST00000484521 383 ntBASIC3.79□□□□□ -1.8
CHFRQ96EP1 AC069499.1-201ENST00000489433 509 ntBASIC3.79□□□□□ -1.8
CHFRQ96EP1 SNORA25.11-201ENST00000515935 105 ntBASIC3.79□□□□□ -1.8
CHFRQ96EP1 SNORA70.18-201ENST00000516696 98 ntBASIC3.79□□□□□ -1.8
CHFRQ96EP1 IGKV2D-36-201ENST00000518643 226 ntBASIC3.79□□□□□ -1.8
CHFRQ96EP1 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.79□□□□□ -1.8
CHFRQ96EP1 AC040926.1-201ENST00000530195 238 ntBASIC3.79□□□□□ -1.8
CHFRQ96EP1 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CHFRQ96EP1 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.79□□□□□ -1.8
CHFRQ96EP1 SUB1P3-201ENST00000564581 315 ntBASIC3.79□□□□□ -1.8
CHFRQ96EP1 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.79□□□□□ -1.8
CHFRQ96EP1 AC010900.2-201ENST00000604508 210 ntBASIC3.79□□□□□ -1.8
CHFRQ96EP1 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
CHFRQ96EP1 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CHFRQ96EP1 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
CHFRQ96EP1 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CHFRQ96EP1 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
CHFRQ96EP1 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
CHFRQ96EP1 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.78□□□□□ -1.8
CHFRQ96EP1 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CHFRQ96EP1 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CHFRQ96EP1 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
CHFRQ96EP1 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.78□□□□□ -1.8
CHFRQ96EP1 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CHFRQ96EP1 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CHFRQ96EP1 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CHFRQ96EP1 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
CHFRQ96EP1 SNORD62.1-201ENST00000362541 86 ntBASIC3.78□□□□□ -1.8
CHFRQ96EP1 Y_RNA.29-201ENST00000362570 113 ntBASIC3.78□□□□□ -1.8
CHFRQ96EP1 Y_RNA.270-201ENST00000364693 104 ntBASIC3.78□□□□□ -1.8
CHFRQ96EP1 RNA5SP267-201ENST00000364893 126 ntBASIC3.78□□□□□ -1.8
CHFRQ96EP1 RNU6-128P-201ENST00000383976 107 ntBASIC3.78□□□□□ -1.8
CHFRQ96EP1 RNU6-125P-201ENST00000384505 107 ntBASIC3.78□□□□□ -1.8
CHFRQ96EP1 SNORA16.2-201ENST00000390991 127 ntBASIC3.78□□□□□ -1.8
CHFRQ96EP1 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.78□□□□□ -1.8
CHFRQ96EP1 AC011742.1-201ENST00000431448 434 ntBASIC3.78□□□□□ -1.8
CHFRQ96EP1 MRPS18BP2-201ENST00000434310 759 ntBASIC3.78□□□□□ -1.8
CHFRQ96EP1 RPL36AP6-201ENST00000435770 321 ntBASIC3.78□□□□□ -1.8
CHFRQ96EP1 AC016696.1-201ENST00000446949 318 ntBASIC3.78□□□□□ -1.8
CHFRQ96EP1 AC115115.1-201ENST00000449927 248 ntBASIC3.78□□□□□ -1.8
CHFRQ96EP1 RBMY2UP-201ENST00000453474 324 ntBASIC3.78□□□□□ -1.8
CHFRQ96EP1 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.78□□□□□ -1.8
CHFRQ96EP1 AC087884.1-201ENST00000469738 328 ntBASIC3.78□□□□□ -1.8
CHFRQ96EP1 RBBP4P6-201ENST00000508098 202 ntBASIC3.78□□□□□ -1.8
CHFRQ96EP1 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.78□□□□□ -1.8
CHFRQ96EP1 SNORA14.1-201ENST00000516113 141 ntBASIC3.78□□□□□ -1.8
CHFRQ96EP1 RNA5SP468-201ENST00000516782 93 ntBASIC3.78□□□□□ -1.8
CHFRQ96EP1 RNU6-570P-201ENST00000517051 105 ntBASIC3.78□□□□□ -1.8
CHFRQ96EP1 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.78□□□□□ -1.8
CHFRQ96EP1 FAM60DP-201ENST00000524174 632 ntBASIC3.78□□□□□ -1.8
CHFRQ96EP1 AL121576.1-201ENST00000556055 276 ntBASIC3.78□□□□□ -1.8
CHFRQ96EP1 AC090615.1-201ENST00000577519 154 ntBASIC3.78□□□□□ -1.8
CHFRQ96EP1 RPL23AP92-201ENST00000603609 255 ntBASIC3.78□□□□□ -1.8
CHFRQ96EP1 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CHFRQ96EP1 AL161423.1-201ENST00000613700 262 ntBASIC3.78□□□□□ -1.8
CHFRQ96EP1 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.78□□□□□ -1.8
CHFRQ96EP1 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.78□□□□□ -1.8
CHFRQ96EP1 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CHFRQ96EP1 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.78□□□□□ -1.8
CHFRQ96EP1 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CHFRQ96EP1 FAM35DP-201ENST00000323387 2712 ntBASIC3.78□□□□□ -1.8
CHFRQ96EP1 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.78□□□□□ -1.81
CHFRQ96EP1 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CHFRQ96EP1 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.77□□□□□ -1.81
CHFRQ96EP1 LINC02471-203ENST00000641941 4752 ntBASIC3.77□□□□□ -1.81
CHFRQ96EP1 AL359893.1-201ENST00000447628 1580 ntBASIC3.77□□□□□ -1.81
CHFRQ96EP1 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CHFRQ96EP1 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.77□□□□□ -1.81
CHFRQ96EP1 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.77□□□□□ -1.81
CHFRQ96EP1 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CHFRQ96EP1 RNU6-263P-201ENST00000363811 107 ntBASIC3.77□□□□□ -1.81
CHFRQ96EP1 SNORA23-201ENST00000365128 182 ntBASIC3.77□□□□□ -1.81
CHFRQ96EP1 Y_RNA.416-201ENST00000384014 113 ntBASIC3.77□□□□□ -1.81
CHFRQ96EP1 RNU6-1226P-201ENST00000384317 107 ntBASIC3.77□□□□□ -1.81
CHFRQ96EP1 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CHFRQ96EP1 DBIP2-201ENST00000419076 262 ntBASIC3.77□□□□□ -1.81
CHFRQ96EP1 AC093106.2-201ENST00000428212 385 ntBASIC3.77□□□□□ -1.81
CHFRQ96EP1 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.77□□□□□ -1.81
CHFRQ96EP1 AL359672.1-201ENST00000442302 409 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 165.2 ms