Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC016691.1-201ENST00000441321 413 ntBASIC2.97□□□□□ -1.93
SNED1Q8TER0 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.97□□□□□ -1.93
SNED1Q8TER0 RNA5SP281-201ENST00000516504 135 ntBASIC2.97□□□□□ -1.93
SNED1Q8TER0 SNORD59.2-201ENST00000516873 68 ntBASIC2.97□□□□□ -1.93
SNED1Q8TER0 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.97□□□□□ -1.93
SNED1Q8TER0 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.97□□□□□ -1.93
SNED1Q8TER0 AL355375.2-201ENST00000574825 175 ntBASIC2.97□□□□□ -1.93
SNED1Q8TER0 AC107294.3-201ENST00000609211 526 ntBASIC2.97□□□□□ -1.93
SNED1Q8TER0 AL354950.2-201ENST00000617939 290 ntBASIC2.97□□□□□ -1.93
SNED1Q8TER0 AC002550.2-201ENST00000621246 394 ntBASIC2.97□□□□□ -1.93
SNED1Q8TER0 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
SNED1Q8TER0 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SNED1Q8TER0 AC103988.1-201ENST00000566382 2177 ntBASIC2.96□□□□□ -1.94
SNED1Q8TER0 AL161781.1-201ENST00000354277 403 ntBASIC2.96□□□□□ -1.94
SNED1Q8TER0 Y_RNA.166-201ENST00000363730 102 ntBASIC2.96□□□□□ -1.94
SNED1Q8TER0 SNORA51.4-201ENST00000364993 124 ntBASIC2.96□□□□□ -1.94
SNED1Q8TER0 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SNED1Q8TER0 RNU6-1074P-201ENST00000383995 104 ntBASIC2.96□□□□□ -1.94
SNED1Q8TER0 Y_RNA.431-201ENST00000384086 102 ntBASIC2.96□□□□□ -1.94
SNED1Q8TER0 RNU6-74P-201ENST00000384235 107 ntBASIC2.96□□□□□ -1.94
SNED1Q8TER0 AL356421.1-201ENST00000403255 413 ntBASIC2.96□□□□□ -1.94
SNED1Q8TER0 AL162578.1-201ENST00000406202 378 ntBASIC2.96□□□□□ -1.94
SNED1Q8TER0 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.96□□□□□ -1.94
SNED1Q8TER0 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.96□□□□□ -1.94
SNED1Q8TER0 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
SNED1Q8TER0 ELOCP4-201ENST00000420090 333 ntBASIC2.96□□□□□ -1.94
SNED1Q8TER0 AC007283.2-201ENST00000424739 197 ntBASIC2.96□□□□□ -1.94
SNED1Q8TER0 AC005297.2-201ENST00000450430 606 ntBASIC2.96□□□□□ -1.94
SNED1Q8TER0 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.96□□□□□ -1.94
SNED1Q8TER0 AP1S2P1-201ENST00000457344 379 ntBASIC2.96□□□□□ -1.94
SNED1Q8TER0 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.96□□□□□ -1.94
SNED1Q8TER0 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.96□□□□□ -1.94
SNED1Q8TER0 AC105029.1-201ENST00000520250 669 ntBASIC2.96□□□□□ -1.94
SNED1Q8TER0 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.96□□□□□ -1.94
SNED1Q8TER0 AC107934.1-201ENST00000522215 217 ntBASIC2.96□□□□□ -1.94
SNED1Q8TER0 CKS1BP7-201ENST00000522230 235 ntBASIC2.96□□□□□ -1.94
SNED1Q8TER0 OR4R1P-201ENST00000529879 463 ntBASIC2.96□□□□□ -1.94
SNED1Q8TER0 OR4P1P-201ENST00000530808 1136 ntBASIC2.96□□□□□ -1.94
SNED1Q8TER0 AP000867.2-201ENST00000532468 320 ntBASIC2.96□□□□□ -1.94
SNED1Q8TER0 AC023050.3-201ENST00000541142 333 ntBASIC2.96□□□□□ -1.94
SNED1Q8TER0 AC126177.3-201ENST00000551839 688 ntBASIC2.96□□□□□ -1.94
SNED1Q8TER0 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SNED1Q8TER0 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.96□□□□□ -1.94
SNED1Q8TER0 AP001836.1-201ENST00000604675 523 ntBASIC2.96□□□□□ -1.94
SNED1Q8TER0 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.96□□□□□ -1.94
SNED1Q8TER0 AL391813.2-201ENST00000609113 322 ntBASIC2.96□□□□□ -1.94
SNED1Q8TER0 AL365204.3-201ENST00000612448 685 ntBASIC2.96□□□□□ -1.94
SNED1Q8TER0 AC093913.1-201ENST00000614178 329 ntBASIC2.96□□□□□ -1.94
SNED1Q8TER0 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.96□□□□□ -1.94
SNED1Q8TER0 AC002076.2-201ENST00000617362 122 ntBASIC2.96□□□□□ -1.94
SNED1Q8TER0 RMST_7.1-201ENST00000621935 268 ntBASIC2.96□□□□□ -1.94
SNED1Q8TER0 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.96□□□□□ -1.94
SNED1Q8TER0 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.96□□□□□ -1.94
SNED1Q8TER0 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SNED1Q8TER0 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SNED1Q8TER0 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
SNED1Q8TER0 RNU6-28P-201ENST00000362378 107 ntBASIC2.95□□□□□ -1.94
SNED1Q8TER0 RNU6-1097P-201ENST00000363586 107 ntBASIC2.95□□□□□ -1.94
SNED1Q8TER0 RNU4-1-201ENST00000363925 141 ntBASIC2.95□□□□□ -1.94
SNED1Q8TER0 RNU6-510P-201ENST00000391239 108 ntBASIC2.95□□□□□ -1.94
SNED1Q8TER0 AL591416.1-201ENST00000404015 867 ntBASIC2.95□□□□□ -1.94
SNED1Q8TER0 SAR1AP4-201ENST00000429225 591 ntBASIC2.95□□□□□ -1.94
SNED1Q8TER0 AC009969.1-201ENST00000438726 172 ntBASIC2.95□□□□□ -1.94
SNED1Q8TER0 AC233279.1-201ENST00000455300 423 ntBASIC2.95□□□□□ -1.94
SNED1Q8TER0 AC133134.1-201ENST00000466800 359 ntBASIC2.95□□□□□ -1.94
SNED1Q8TER0 RPL23AP45-201ENST00000476406 468 ntBASIC2.95□□□□□ -1.94
SNED1Q8TER0 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.95□□□□□ -1.94
SNED1Q8TER0 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.95□□□□□ -1.94
SNED1Q8TER0 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.95□□□□□ -1.94
SNED1Q8TER0 SNORA19.2-201ENST00000516013 114 ntBASIC2.95□□□□□ -1.94
SNED1Q8TER0 SNORD60.2-201ENST00000516883 86 ntBASIC2.95□□□□□ -1.94
SNED1Q8TER0 RNU6-711P-201ENST00000517255 106 ntBASIC2.95□□□□□ -1.94
SNED1Q8TER0 ERHP1-201ENST00000523006 310 ntBASIC2.95□□□□□ -1.94
SNED1Q8TER0 AC022616.3-201ENST00000523940 148 ntBASIC2.95□□□□□ -1.94
SNED1Q8TER0 AP001804.3-201ENST00000525146 880 ntBASIC2.95□□□□□ -1.94
SNED1Q8TER0 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.95□□□□□ -1.94
SNED1Q8TER0 AP000907.2-201ENST00000530827 353 ntBASIC2.95□□□□□ -1.94
SNED1Q8TER0 SNRPGP16-201ENST00000533275 226 ntBASIC2.95□□□□□ -1.94
SNED1Q8TER0 RPL23AP84-201ENST00000571193 464 ntBASIC2.95□□□□□ -1.94
SNED1Q8TER0 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC2.95□□□□□ -1.94
SNED1Q8TER0 AC010525.2-201ENST00000590920 195 ntBASIC2.95□□□□□ -1.94
SNED1Q8TER0 AL355472.4-201ENST00000610233 626 ntBASIC2.95□□□□□ -1.94
SNED1Q8TER0 AC040168.1-201ENST00000623594 991 ntBASIC2.95□□□□□ -1.94
SNED1Q8TER0 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.95□□□□□ -1.94
SNED1Q8TER0 MIR1302-1-201ENST00000637932 143 ntBASIC2.95□□□□□ -1.94
SNED1Q8TER0 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.95□□□□□ -1.94
SNED1Q8TER0 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.95□□□□□ -1.94
SNED1Q8TER0 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SNED1Q8TER0 MTCO1P9-201ENST00000505577 1534 ntBASIC2.95□□□□□ -1.94
SNED1Q8TER0 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SNED1Q8TER0 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.95□□□□□ -1.94
SNED1Q8TER0 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SNED1Q8TER0 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.94□□□□□ -1.94
SNED1Q8TER0 RNU6-108P-201ENST00000365558 107 ntBASIC2.94□□□□□ -1.94
SNED1Q8TER0 Y_RNA.394-201ENST00000383942 103 ntBASIC2.94□□□□□ -1.94
SNED1Q8TER0 MIR1-2-201ENST00000384961 85 ntBASIC2.94□□□□□ -1.94
SNED1Q8TER0 RNU1-101P-201ENST00000391171 127 ntBASIC2.94□□□□□ -1.94
SNED1Q8TER0 AL354719.1-201ENST00000406535 843 ntBASIC2.94□□□□□ -1.94
SNED1Q8TER0 RNU6-1077P-201ENST00000410506 102 ntBASIC2.94□□□□□ -1.94
SNED1Q8TER0 RPS15AP12-201ENST00000419498 388 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 347 ms