Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 AC079382.1-201ENST00000493346 557 ntBASIC2.37□□□□□ -2.03
CCDC197Q8NCU1 AC090255.1-201ENST00000495779 349 ntBASIC2.37□□□□□ -2.03
CCDC197Q8NCU1 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC197Q8NCU1 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC197Q8NCU1 AC092436.1-201ENST00000506450 503 ntBASIC2.37□□□□□ -2.03
CCDC197Q8NCU1 RNU1-86P-201ENST00000516108 154 ntBASIC2.37□□□□□ -2.03
CCDC197Q8NCU1 RNU1-107P-201ENST00000516617 154 ntBASIC2.37□□□□□ -2.03
CCDC197Q8NCU1 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.37□□□□□ -2.03
CCDC197Q8NCU1 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC197Q8NCU1 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC197Q8NCU1 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC197Q8NCU1 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC2.37□□□□□ -2.03
CCDC197Q8NCU1 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.37□□□□□ -2.03
CCDC197Q8NCU1 AC073539.2-201ENST00000597113 165 ntBASIC2.37□□□□□ -2.03
CCDC197Q8NCU1 NRBF2P5-201ENST00000603087 788 ntBASIC2.37□□□□□ -2.03
CCDC197Q8NCU1 AC091805.2-201ENST00000603848 235 ntBASIC2.37□□□□□ -2.03
CCDC197Q8NCU1 AC008945.2-201ENST00000606056 604 ntBASIC2.37□□□□□ -2.03
CCDC197Q8NCU1 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC197Q8NCU1 uc_338.14-201ENST00000613162 166 ntBASIC2.37□□□□□ -2.03
CCDC197Q8NCU1 MIR6895-201ENST00000613497 78 ntBASIC2.37□□□□□ -2.03
CCDC197Q8NCU1 U6.42-201ENST00000618440 107 ntBASIC2.37□□□□□ -2.03
CCDC197Q8NCU1 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.37□□□□□ -2.03
CCDC197Q8NCU1 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
CCDC197Q8NCU1 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.37□□□□□ -2.03
CCDC197Q8NCU1 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CCDC197Q8NCU1 AC080128.1-201ENST00000474389 1917 ntBASIC2.36□□□□□ -2.03
CCDC197Q8NCU1 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.36□□□□□ -2.03
CCDC197Q8NCU1 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
CCDC197Q8NCU1 AL139276.1-201ENST00000311910 1001 ntBASIC2.36□□□□□ -2.03
CCDC197Q8NCU1 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.36□□□□□ -2.03
CCDC197Q8NCU1 RNU4-24P-201ENST00000364565 139 ntBASIC2.36□□□□□ -2.03
CCDC197Q8NCU1 SNORA67.1-201ENST00000364749 141 ntBASIC2.36□□□□□ -2.03
CCDC197Q8NCU1 Y_RNA.296-201ENST00000364930 108 ntBASIC2.36□□□□□ -2.03
CCDC197Q8NCU1 RNA5SP37-201ENST00000365420 130 ntBASIC2.36□□□□□ -2.03
CCDC197Q8NCU1 RNU5A-6P-201ENST00000384136 116 ntBASIC2.36□□□□□ -2.03
CCDC197Q8NCU1 RNU6-301P-201ENST00000384277 107 ntBASIC2.36□□□□□ -2.03
CCDC197Q8NCU1 RNU6-72P-201ENST00000384285 79 ntBASIC2.36□□□□□ -2.03
CCDC197Q8NCU1 MIR10A-201ENST00000385043 110 ntBASIC2.36□□□□□ -2.03
CCDC197Q8NCU1 RPS4XP8-201ENST00000402039 771 ntBASIC2.36□□□□□ -2.03
CCDC197Q8NCU1 RNU4-46P-201ENST00000410818 138 ntBASIC2.36□□□□□ -2.03
CCDC197Q8NCU1 AC007064.1-201ENST00000412238 351 ntBASIC2.36□□□□□ -2.03
CCDC197Q8NCU1 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.36□□□□□ -2.03
CCDC197Q8NCU1 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
CCDC197Q8NCU1 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.36□□□□□ -2.03
CCDC197Q8NCU1 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.36□□□□□ -2.03
CCDC197Q8NCU1 AC087499.2-201ENST00000432861 149 ntBASIC2.36□□□□□ -2.03
CCDC197Q8NCU1 AL671855.1-201ENST00000446875 1203 ntBASIC2.36□□□□□ -2.03
CCDC197Q8NCU1 AL118520.1-201ENST00000450770 291 ntBASIC2.36□□□□□ -2.03
CCDC197Q8NCU1 AL356010.1-201ENST00000456364 102 ntBASIC2.36□□□□□ -2.03
CCDC197Q8NCU1 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC197Q8NCU1 snoU13.22-201ENST00000459428 104 ntBASIC2.36□□□□□ -2.03
CCDC197Q8NCU1 AP001324.2-201ENST00000461163 319 ntBASIC2.36□□□□□ -2.03
CCDC197Q8NCU1 AL672167.3-201ENST00000465951 960 ntBASIC2.36□□□□□ -2.03
CCDC197Q8NCU1 AL358832.1-201ENST00000497800 389 ntBASIC2.36□□□□□ -2.03
CCDC197Q8NCU1 MTND2P33-201ENST00000506452 1031 ntBASIC2.36□□□□□ -2.03
CCDC197Q8NCU1 MTCO3P7-201ENST00000510008 774 ntBASIC2.36□□□□□ -2.03
CCDC197Q8NCU1 AC010493.1-201ENST00000513479 292 ntBASIC2.36□□□□□ -2.03
CCDC197Q8NCU1 AP005435.4-201ENST00000529514 284 ntBASIC2.36□□□□□ -2.03
CCDC197Q8NCU1 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.36□□□□□ -2.03
CCDC197Q8NCU1 MIR5692A1-201ENST00000580523 69 ntBASIC2.36□□□□□ -2.03
CCDC197Q8NCU1 AL161756.2-201ENST00000604597 246 ntBASIC2.36□□□□□ -2.03
CCDC197Q8NCU1 AP001596.2-201ENST00000608410 312 ntBASIC2.36□□□□□ -2.03
CCDC197Q8NCU1 Z99129.1-201ENST00000612510 255 ntBASIC2.36□□□□□ -2.03
CCDC197Q8NCU1 AC093783.1-201ENST00000612976 329 ntBASIC2.36□□□□□ -2.03
CCDC197Q8NCU1 RMST_4.1-201ENST00000616886 107 ntBASIC2.36□□□□□ -2.03
CCDC197Q8NCU1 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.36□□□□□ -2.03
CCDC197Q8NCU1 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.36□□□□□ -2.03
CCDC197Q8NCU1 uc_338.11-201ENST00000619132 160 ntBASIC2.36□□□□□ -2.03
CCDC197Q8NCU1 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC197Q8NCU1 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.36□□□□□ -2.03
CCDC197Q8NCU1 U4.3-201ENST00000621047 82 ntBASIC2.36□□□□□ -2.03
CCDC197Q8NCU1 AC005609.4-201ENST00000625071 447 ntBASIC2.36□□□□□ -2.03
CCDC197Q8NCU1 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.36□□□□□ -2.03
CCDC197Q8NCU1 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CCDC197Q8NCU1 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CCDC197Q8NCU1 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.35□□□□□ -2.03
CCDC197Q8NCU1 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.35□□□□□ -2.03
CCDC197Q8NCU1 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
CCDC197Q8NCU1 AL109809.4-201ENST00000603520 2185 ntBASIC2.35□□□□□ -2.03
CCDC197Q8NCU1 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CCDC197Q8NCU1 RNU4-40P-201ENST00000364351 143 ntBASIC2.35□□□□□ -2.03
CCDC197Q8NCU1 MIR147B-201ENST00000390185 80 ntBASIC2.35□□□□□ -2.03
CCDC197Q8NCU1 AC068050.1-201ENST00000394891 380 ntBASIC2.35□□□□□ -2.03
CCDC197Q8NCU1 FTH1P15-201ENST00000406984 280 ntBASIC2.35□□□□□ -2.03
CCDC197Q8NCU1 RNU2-16P-201ENST00000410712 136 ntBASIC2.35□□□□□ -2.03
CCDC197Q8NCU1 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC197Q8NCU1 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC2.35□□□□□ -2.03
CCDC197Q8NCU1 AC010975.2-201ENST00000427781 588 ntBASIC2.35□□□□□ -2.03
CCDC197Q8NCU1 AL669831.1-202ENST00000428504 417 ntBASIC2.35□□□□□ -2.03
CCDC197Q8NCU1 AL139132.1-201ENST00000431587 344 ntBASIC2.35□□□□□ -2.03
CCDC197Q8NCU1 AC091390.1-201ENST00000433904 331 ntBASIC2.35□□□□□ -2.03
CCDC197Q8NCU1 AL451074.3-201ENST00000437709 472 ntBASIC2.35□□□□□ -2.03
CCDC197Q8NCU1 GTF2IP13-201ENST00000438487 386 ntBASIC2.35□□□□□ -2.03
CCDC197Q8NCU1 AL445687.1-201ENST00000439946 251 ntBASIC2.35□□□□□ -2.03
CCDC197Q8NCU1 MTND1P18-201ENST00000448191 573 ntBASIC2.35□□□□□ -2.03
CCDC197Q8NCU1 GMFBP1-201ENST00000467831 427 ntBASIC2.35□□□□□ -2.03
CCDC197Q8NCU1 AC006512.1-201ENST00000468816 291 ntBASIC2.35□□□□□ -2.03
CCDC197Q8NCU1 AC011005.2-201ENST00000487324 359 ntBASIC2.35□□□□□ -2.03
CCDC197Q8NCU1 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.35□□□□□ -2.03
CCDC197Q8NCU1 MTCO3P9-201ENST00000506989 781 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms