Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.89□□□□□ -1.79
PRPF38AQ8NAV1 NIPA2P5-201ENST00000452282 464 ntBASIC3.89□□□□□ -1.79
PRPF38AQ8NAV1 RNU7-138P-201ENST00000459479 64 ntBASIC3.89□□□□□ -1.79
PRPF38AQ8NAV1 RPS29P2-201ENST00000479278 136 ntBASIC3.89□□□□□ -1.79
PRPF38AQ8NAV1 RPS27P26-201ENST00000494583 239 ntBASIC3.89□□□□□ -1.79
PRPF38AQ8NAV1 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.89□□□□□ -1.79
PRPF38AQ8NAV1 RAC1P5-201ENST00000512182 576 ntBASIC3.89□□□□□ -1.79
PRPF38AQ8NAV1 TBCAP3-201ENST00000512475 312 ntBASIC3.89□□□□□ -1.79
PRPF38AQ8NAV1 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.89□□□□□ -1.79
PRPF38AQ8NAV1 RNU6-1069P-201ENST00000516612 133 ntBASIC3.89□□□□□ -1.79
PRPF38AQ8NAV1 SNORA70.19-201ENST00000516717 90 ntBASIC3.89□□□□□ -1.79
PRPF38AQ8NAV1 BTF3P12-201ENST00000519620 469 ntBASIC3.89□□□□□ -1.79
PRPF38AQ8NAV1 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.89□□□□□ -1.79
PRPF38AQ8NAV1 AL133393.1-201ENST00000603277 287 ntBASIC3.89□□□□□ -1.79
PRPF38AQ8NAV1 AP000787.2-201ENST00000604432 568 ntBASIC3.89□□□□□ -1.79
PRPF38AQ8NAV1 AL357078.3-201ENST00000607528 618 ntBASIC3.89□□□□□ -1.79
PRPF38AQ8NAV1 AC022149.2-201ENST00000621061 203 ntBASIC3.89□□□□□ -1.79
PRPF38AQ8NAV1 AL136221.1-201ENST00000621449 509 ntBASIC3.89□□□□□ -1.79
PRPF38AQ8NAV1 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PRPF38AQ8NAV1 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PRPF38AQ8NAV1 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
PRPF38AQ8NAV1 AC103988.1-201ENST00000566382 2177 ntBASIC3.89□□□□□ -1.79
PRPF38AQ8NAV1 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.88□□□□□ -1.79
PRPF38AQ8NAV1 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PRPF38AQ8NAV1 CBX3P1-201ENST00000325243 554 ntBASIC3.88□□□□□ -1.79
PRPF38AQ8NAV1 RNA5SP197-201ENST00000363357 119 ntBASIC3.88□□□□□ -1.79
PRPF38AQ8NAV1 SNORA72.1-201ENST00000363485 129 ntBASIC3.88□□□□□ -1.79
PRPF38AQ8NAV1 Y_RNA.414-201ENST00000384011 101 ntBASIC3.88□□□□□ -1.79
PRPF38AQ8NAV1 SNORA32.2-201ENST00000384049 122 ntBASIC3.88□□□□□ -1.79
PRPF38AQ8NAV1 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.88□□□□□ -1.79
PRPF38AQ8NAV1 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.88□□□□□ -1.79
PRPF38AQ8NAV1 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.88□□□□□ -1.79
PRPF38AQ8NAV1 MTCO2P30-201ENST00000503662 364 ntBASIC3.88□□□□□ -1.79
PRPF38AQ8NAV1 AP004607.1-201ENST00000524456 203 ntBASIC3.88□□□□□ -1.79
PRPF38AQ8NAV1 AC087241.2-201ENST00000535801 324 ntBASIC3.88□□□□□ -1.79
PRPF38AQ8NAV1 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.88□□□□□ -1.79
PRPF38AQ8NAV1 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.88□□□□□ -1.79
PRPF38AQ8NAV1 AC021739.1-201ENST00000559631 174 ntBASIC3.88□□□□□ -1.79
PRPF38AQ8NAV1 AC010653.1-201ENST00000571108 881 ntBASIC3.88□□□□□ -1.79
PRPF38AQ8NAV1 MIR5004-201ENST00000579078 107 ntBASIC3.88□□□□□ -1.79
PRPF38AQ8NAV1 AL022345.1-201ENST00000607292 135 ntBASIC3.88□□□□□ -1.79
PRPF38AQ8NAV1 AC002064.3-201ENST00000623448 346 ntBASIC3.88□□□□□ -1.79
PRPF38AQ8NAV1 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.88□□□□□ -1.79
PRPF38AQ8NAV1 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.88□□□□□ -1.79
PRPF38AQ8NAV1 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PRPF38AQ8NAV1 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PRPF38AQ8NAV1 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PRPF38AQ8NAV1 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.87□□□□□ -1.79
PRPF38AQ8NAV1 AP002088.1-201ENST00000382740 395 ntBASIC3.87□□□□□ -1.79
PRPF38AQ8NAV1 SNORA48.2-201ENST00000390926 124 ntBASIC3.87□□□□□ -1.79
PRPF38AQ8NAV1 RNU4-47P-201ENST00000410876 114 ntBASIC3.87□□□□□ -1.79
PRPF38AQ8NAV1 Z99755.1-201ENST00000414048 380 ntBASIC3.87□□□□□ -1.79
PRPF38AQ8NAV1 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.87□□□□□ -1.79
PRPF38AQ8NAV1 PGBD4P6-201ENST00000421501 610 ntBASIC3.87□□□□□ -1.79
PRPF38AQ8NAV1 MTCO3P46-201ENST00000425787 232 ntBASIC3.87□□□□□ -1.79
PRPF38AQ8NAV1 HIGD1AP2-201ENST00000446367 280 ntBASIC3.87□□□□□ -1.79
PRPF38AQ8NAV1 PMCHL2-203ENST00000457791 237 ntBASIC3.87□□□□□ -1.79
PRPF38AQ8NAV1 AC010401.1-201ENST00000463867 348 ntBASIC3.87□□□□□ -1.79
PRPF38AQ8NAV1 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.87□□□□□ -1.79
PRPF38AQ8NAV1 RN7SL504P-201ENST00000494496 287 ntBASIC3.87□□□□□ -1.79
PRPF38AQ8NAV1 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.87□□□□□ -1.79
PRPF38AQ8NAV1 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.87□□□□□ -1.79
PRPF38AQ8NAV1 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.87□□□□□ -1.79
PRPF38AQ8NAV1 AC093331.1-201ENST00000521474 169 ntBASIC3.87□□□□□ -1.79
PRPF38AQ8NAV1 RNU6-323P-201ENST00000521915 107 ntBASIC3.87□□□□□ -1.79
PRPF38AQ8NAV1 AC025281.1-201ENST00000567026 265 ntBASIC3.87□□□□□ -1.79
PRPF38AQ8NAV1 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.87□□□□□ -1.79
PRPF38AQ8NAV1 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PRPF38AQ8NAV1 AC009248.2-201ENST00000619826 254 ntBASIC3.87□□□□□ -1.79
PRPF38AQ8NAV1 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.87□□□□□ -1.79
PRPF38AQ8NAV1 CDC27P3-201ENST00000635418 1910 ntBASIC3.87□□□□□ -1.79
PRPF38AQ8NAV1 AC110774.1-201ENST00000623567 2018 ntBASIC3.87□□□□□ -1.79
PRPF38AQ8NAV1 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.87□□□□□ -1.79
PRPF38AQ8NAV1 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
PRPF38AQ8NAV1 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.86□□□□□ -1.79
PRPF38AQ8NAV1 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PRPF38AQ8NAV1 RNU6-898P-201ENST00000365627 104 ntBASIC3.86□□□□□ -1.79
PRPF38AQ8NAV1 RNU6-72P-201ENST00000384285 79 ntBASIC3.86□□□□□ -1.79
PRPF38AQ8NAV1 RNY3P14-201ENST00000384309 102 ntBASIC3.86□□□□□ -1.79
PRPF38AQ8NAV1 RNA5SP354-201ENST00000391247 136 ntBASIC3.86□□□□□ -1.79
PRPF38AQ8NAV1 AL357075.1-201ENST00000404107 726 ntBASIC3.86□□□□□ -1.79
PRPF38AQ8NAV1 NDUFB4P4-201ENST00000404822 243 ntBASIC3.86□□□□□ -1.79
PRPF38AQ8NAV1 AC096649.2-201ENST00000416186 393 ntBASIC3.86□□□□□ -1.79
PRPF38AQ8NAV1 AC009414.1-201ENST00000427200 443 ntBASIC3.86□□□□□ -1.79
PRPF38AQ8NAV1 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.86□□□□□ -1.79
PRPF38AQ8NAV1 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.86□□□□□ -1.79
PRPF38AQ8NAV1 MTND4LP16-201ENST00000440828 295 ntBASIC3.86□□□□□ -1.79
PRPF38AQ8NAV1 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.86□□□□□ -1.79
PRPF38AQ8NAV1 AC006199.1-201ENST00000548728 219 ntBASIC3.86□□□□□ -1.79
PRPF38AQ8NAV1 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.86□□□□□ -1.79
PRPF38AQ8NAV1 AC005730.3-201ENST00000583067 366 ntBASIC3.86□□□□□ -1.79
PRPF38AQ8NAV1 AC011471.1-201ENST00000585766 187 ntBASIC3.86□□□□□ -1.79
PRPF38AQ8NAV1 OR1M4P-201ENST00000589199 287 ntBASIC3.86□□□□□ -1.79
PRPF38AQ8NAV1 AL162713.1-201ENST00000604480 262 ntBASIC3.86□□□□□ -1.79
PRPF38AQ8NAV1 AC073657.2-201ENST00000605661 303 ntBASIC3.86□□□□□ -1.79
PRPF38AQ8NAV1 AL121757.2-201ENST00000611223 313 ntBASIC3.86□□□□□ -1.79
PRPF38AQ8NAV1 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.86□□□□□ -1.79
PRPF38AQ8NAV1 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.86□□□□□ -1.79
PRPF38AQ8NAV1 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.86□□□□□ -1.79
PRPF38AQ8NAV1 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms