Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 AC138915.1-201ENST00000565427 1685 ntBASIC2.11□□□□□ -2.07
LINC01555Q8NAE3 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
LINC01555Q8NAE3 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.11□□□□□ -2.07
LINC01555Q8NAE3 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
LINC01555Q8NAE3 Y_RNA.1-201ENST00000352915 104 ntBASIC2.1□□□□□ -2.07
LINC01555Q8NAE3 VTRNA1-1-201ENST00000363120 99 ntBASIC2.1□□□□□ -2.07
LINC01555Q8NAE3 RNU6-61P-201ENST00000365528 109 ntBASIC2.1□□□□□ -2.07
LINC01555Q8NAE3 RNA5SP354-201ENST00000391247 136 ntBASIC2.1□□□□□ -2.07
LINC01555Q8NAE3 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.1□□□□□ -2.07
LINC01555Q8NAE3 CALM2P3-201ENST00000400429 449 ntBASIC2.1□□□□□ -2.07
LINC01555Q8NAE3 U3.37-201ENST00000408528 213 ntBASIC2.1□□□□□ -2.07
LINC01555Q8NAE3 AL513477.1-202ENST00000417061 214 ntBASIC2.1□□□□□ -2.07
LINC01555Q8NAE3 ZNF90P2-204ENST00000419323 1075 ntBASIC2.1□□□□□ -2.07
LINC01555Q8NAE3 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.1□□□□□ -2.07
LINC01555Q8NAE3 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.1□□□□□ -2.07
LINC01555Q8NAE3 MTCO2P19-201ENST00000427513 598 ntBASIC2.1□□□□□ -2.07
LINC01555Q8NAE3 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.1□□□□□ -2.07
LINC01555Q8NAE3 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.1□□□□□ -2.07
LINC01555Q8NAE3 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.1□□□□□ -2.07
LINC01555Q8NAE3 RNU6-420P-201ENST00000458780 107 ntBASIC2.1□□□□□ -2.07
LINC01555Q8NAE3 MRPS17P3-201ENST00000465453 385 ntBASIC2.1□□□□□ -2.07
LINC01555Q8NAE3 TRBV12-1-201ENST00000479785 344 ntBASIC2.1□□□□□ -2.07
LINC01555Q8NAE3 AL160314.1-201ENST00000490836 438 ntBASIC2.1□□□□□ -2.07
LINC01555Q8NAE3 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.1□□□□□ -2.07
LINC01555Q8NAE3 RNA5SP165-201ENST00000517142 115 ntBASIC2.1□□□□□ -2.07
LINC01555Q8NAE3 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
LINC01555Q8NAE3 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
LINC01555Q8NAE3 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.1□□□□□ -2.07
LINC01555Q8NAE3 AC068790.6-201ENST00000602558 258 ntBASIC2.1□□□□□ -2.07
LINC01555Q8NAE3 AC104763.2-201ENST00000604179 382 ntBASIC2.1□□□□□ -2.07
LINC01555Q8NAE3 AL670379.4-201ENST00000605279 254 ntBASIC2.1□□□□□ -2.07
LINC01555Q8NAE3 AP001596.2-201ENST00000608410 312 ntBASIC2.1□□□□□ -2.07
LINC01555Q8NAE3 AC084782.3-201ENST00000612282 578 ntBASIC2.1□□□□□ -2.07
LINC01555Q8NAE3 AC034102.8-201ENST00000615146 484 ntBASIC2.1□□□□□ -2.07
LINC01555Q8NAE3 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.1□□□□□ -2.07
LINC01555Q8NAE3 AC073308.1-201ENST00000623696 305 ntBASIC2.1□□□□□ -2.07
LINC01555Q8NAE3 AL512643.1-201ENST00000635735 524 ntBASIC2.1□□□□□ -2.07
LINC01555Q8NAE3 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.1□□□□□ -2.07
LINC01555Q8NAE3 MTND5P42-201ENST00000637720 498 ntBASIC2.1□□□□□ -2.07
LINC01555Q8NAE3 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
LINC01555Q8NAE3 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
LINC01555Q8NAE3 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
LINC01555Q8NAE3 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.09□□□□□ -2.07
LINC01555Q8NAE3 ZNF680P1-201ENST00000436625 1469 ntBASIC2.09□□□□□ -2.07
LINC01555Q8NAE3 RNU6-179P-201ENST00000363350 107 ntBASIC2.09□□□□□ -2.07
LINC01555Q8NAE3 SNORA4.3-201ENST00000365564 137 ntBASIC2.09□□□□□ -2.07
LINC01555Q8NAE3 RNU6-1215P-201ENST00000384441 102 ntBASIC2.09□□□□□ -2.07
LINC01555Q8NAE3 Y_RNA.576-201ENST00000384781 102 ntBASIC2.09□□□□□ -2.07
LINC01555Q8NAE3 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
LINC01555Q8NAE3 RPL21P75-201ENST00000396599 483 ntBASIC2.09□□□□□ -2.07
LINC01555Q8NAE3 RPL21P28-201ENST00000401418 483 ntBASIC2.09□□□□□ -2.07
LINC01555Q8NAE3 FO393413.1-201ENST00000402892 195 ntBASIC2.09□□□□□ -2.07
LINC01555Q8NAE3 AL592114.1-201ENST00000403842 483 ntBASIC2.09□□□□□ -2.07
LINC01555Q8NAE3 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.09□□□□□ -2.07
LINC01555Q8NAE3 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.09□□□□□ -2.07
LINC01555Q8NAE3 MTATP6P18-201ENST00000417994 673 ntBASIC2.09□□□□□ -2.07
LINC01555Q8NAE3 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.09□□□□□ -2.07
LINC01555Q8NAE3 ZNF863P-201ENST00000426746 417 ntBASIC2.09□□□□□ -2.07
LINC01555Q8NAE3 CALM2P2-201ENST00000428512 440 ntBASIC2.09□□□□□ -2.07
LINC01555Q8NAE3 GPM6BP2-201ENST00000432046 144 ntBASIC2.09□□□□□ -2.07
LINC01555Q8NAE3 RPL36AP53-201ENST00000432891 316 ntBASIC2.09□□□□□ -2.07
LINC01555Q8NAE3 DNAJC19P4-201ENST00000440115 345 ntBASIC2.09□□□□□ -2.07
LINC01555Q8NAE3 RPL32P28-201ENST00000443577 397 ntBASIC2.09□□□□□ -2.07
LINC01555Q8NAE3 AC096638.1-201ENST00000444678 216 ntBASIC2.09□□□□□ -2.07
LINC01555Q8NAE3 GPM6BP1-201ENST00000446387 144 ntBASIC2.09□□□□□ -2.07
LINC01555Q8NAE3 AL118520.1-201ENST00000450770 291 ntBASIC2.09□□□□□ -2.07
LINC01555Q8NAE3 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.09□□□□□ -2.07
LINC01555Q8NAE3 RPL37P6-201ENST00000460682 294 ntBASIC2.09□□□□□ -2.07
LINC01555Q8NAE3 RPL21P39-201ENST00000463605 483 ntBASIC2.09□□□□□ -2.07
LINC01555Q8NAE3 RN7SL429P-201ENST00000479090 223 ntBASIC2.09□□□□□ -2.07
LINC01555Q8NAE3 RPL21P93-201ENST00000480465 489 ntBASIC2.09□□□□□ -2.07
LINC01555Q8NAE3 RN7SL489P-201ENST00000486185 223 ntBASIC2.09□□□□□ -2.07
LINC01555Q8NAE3 RN7SL327P-201ENST00000488659 223 ntBASIC2.09□□□□□ -2.07
LINC01555Q8NAE3 AC093591.1-201ENST00000491435 481 ntBASIC2.09□□□□□ -2.07
LINC01555Q8NAE3 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.09□□□□□ -2.07
LINC01555Q8NAE3 RPL21P16-201ENST00000495531 483 ntBASIC2.09□□□□□ -2.07
LINC01555Q8NAE3 AC010493.1-201ENST00000513479 292 ntBASIC2.09□□□□□ -2.07
LINC01555Q8NAE3 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.09□□□□□ -2.07
LINC01555Q8NAE3 RNU6-720P-201ENST00000516363 108 ntBASIC2.09□□□□□ -2.07
LINC01555Q8NAE3 RNU6-314P-201ENST00000516574 104 ntBASIC2.09□□□□□ -2.07
LINC01555Q8NAE3 RNU6-914P-201ENST00000516749 109 ntBASIC2.09□□□□□ -2.07
LINC01555Q8NAE3 Y_RNA.704-201ENST00000516851 102 ntBASIC2.09□□□□□ -2.07
LINC01555Q8NAE3 RNU6-677P-201ENST00000516914 101 ntBASIC2.09□□□□□ -2.07
LINC01555Q8NAE3 RNA5SP291-201ENST00000517222 105 ntBASIC2.09□□□□□ -2.07
LINC01555Q8NAE3 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.09□□□□□ -2.07
LINC01555Q8NAE3 OR4R1P-201ENST00000529879 463 ntBASIC2.09□□□□□ -2.07
LINC01555Q8NAE3 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.09□□□□□ -2.07
LINC01555Q8NAE3 RPS3AP4-201ENST00000555161 764 ntBASIC2.09□□□□□ -2.07
LINC01555Q8NAE3 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.09□□□□□ -2.07
LINC01555Q8NAE3 AC008752.3-201ENST00000588113 712 ntBASIC2.09□□□□□ -2.07
LINC01555Q8NAE3 AC019159.1-201ENST00000605094 187 ntBASIC2.09□□□□□ -2.07
LINC01555Q8NAE3 RPL23AP88-201ENST00000605759 454 ntBASIC2.09□□□□□ -2.07
LINC01555Q8NAE3 MIR15A-201ENST00000607334 83 ntBASIC2.09□□□□□ -2.07
LINC01555Q8NAE3 AC126118.1-201ENST00000607744 628 ntBASIC2.09□□□□□ -2.07
LINC01555Q8NAE3 AC092954.2-201ENST00000609103 430 ntBASIC2.09□□□□□ -2.07
LINC01555Q8NAE3 AC013562.2-201ENST00000611632 603 ntBASIC2.09□□□□□ -2.07
LINC01555Q8NAE3 AL365204.3-201ENST00000612448 685 ntBASIC2.09□□□□□ -2.07
LINC01555Q8NAE3 AC012409.4-201ENST00000612923 249 ntBASIC2.09□□□□□ -2.07
LINC01555Q8NAE3 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.09□□□□□ -2.07
LINC01555Q8NAE3 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms