Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CLIP4Q8N3C7 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.98□□□□□ -1.93
CLIP4Q8N3C7 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CLIP4Q8N3C7 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CLIP4Q8N3C7 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
CLIP4Q8N3C7 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.98□□□□□ -1.93
CLIP4Q8N3C7 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.98□□□□□ -1.93
CLIP4Q8N3C7 Y_RNA.138-201ENST00000363462 102 ntBASIC2.98□□□□□ -1.93
CLIP4Q8N3C7 RNA5SP50-201ENST00000363731 107 ntBASIC2.98□□□□□ -1.93
CLIP4Q8N3C7 RNU6-1303P-201ENST00000364841 107 ntBASIC2.98□□□□□ -1.93
CLIP4Q8N3C7 MIR578-201ENST00000384828 96 ntBASIC2.98□□□□□ -1.93
CLIP4Q8N3C7 Y_RNA.579-201ENST00000390939 94 ntBASIC2.98□□□□□ -1.93
CLIP4Q8N3C7 SNORA48.7-201ENST00000391302 135 ntBASIC2.98□□□□□ -1.93
CLIP4Q8N3C7 AP000567.1-201ENST00000406413 156 ntBASIC2.98□□□□□ -1.93
CLIP4Q8N3C7 MIR1290-201ENST00000408735 78 ntBASIC2.98□□□□□ -1.93
CLIP4Q8N3C7 RN7SKP158-201ENST00000410453 326 ntBASIC2.98□□□□□ -1.93
CLIP4Q8N3C7 RN7SKP58-201ENST00000411010 305 ntBASIC2.98□□□□□ -1.93
CLIP4Q8N3C7 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.98□□□□□ -1.93
CLIP4Q8N3C7 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.98□□□□□ -1.93
CLIP4Q8N3C7 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.98□□□□□ -1.93
CLIP4Q8N3C7 AF228730.4-201ENST00000421457 183 ntBASIC2.98□□□□□ -1.93
CLIP4Q8N3C7 AL139281.1-201ENST00000422120 335 ntBASIC2.98□□□□□ -1.93
CLIP4Q8N3C7 NDUFB4P6-201ENST00000436819 366 ntBASIC2.98□□□□□ -1.93
CLIP4Q8N3C7 FABP5P14-201ENST00000437273 393 ntBASIC2.98□□□□□ -1.93
CLIP4Q8N3C7 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.98□□□□□ -1.93
CLIP4Q8N3C7 SNORA84-201ENST00000459229 133 ntBASIC2.98□□□□□ -1.93
CLIP4Q8N3C7 AC008526.1-201ENST00000509149 338 ntBASIC2.98□□□□□ -1.93
CLIP4Q8N3C7 MTND3P25-201ENST00000509243 135 ntBASIC2.98□□□□□ -1.93
CLIP4Q8N3C7 RNU1-61P-201ENST00000516107 151 ntBASIC2.98□□□□□ -1.93
CLIP4Q8N3C7 SCARNA15.1-201ENST00000516384 125 ntBASIC2.98□□□□□ -1.93
CLIP4Q8N3C7 RNU6-1332P-201ENST00000516666 104 ntBASIC2.98□□□□□ -1.93
CLIP4Q8N3C7 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.98□□□□□ -1.93
CLIP4Q8N3C7 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CLIP4Q8N3C7 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.98□□□□□ -1.93
CLIP4Q8N3C7 MIR548AC-201ENST00000585049 88 ntBASIC2.98□□□□□ -1.93
CLIP4Q8N3C7 AC073539.2-201ENST00000597113 165 ntBASIC2.98□□□□□ -1.93
CLIP4Q8N3C7 AC078899.3-201ENST00000599065 212 ntBASIC2.98□□□□□ -1.93
CLIP4Q8N3C7 AL161798.1-201ENST00000604630 131 ntBASIC2.98□□□□□ -1.93
CLIP4Q8N3C7 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.98□□□□□ -1.93
CLIP4Q8N3C7 AC002044.1-201ENST00000606707 158 ntBASIC2.98□□□□□ -1.93
CLIP4Q8N3C7 AL355365.1-201ENST00000616480 294 ntBASIC2.98□□□□□ -1.93
CLIP4Q8N3C7 PLCE1P1-201ENST00000622094 305 ntBASIC2.98□□□□□ -1.93
CLIP4Q8N3C7 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CLIP4Q8N3C7 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
CLIP4Q8N3C7 AC008568.2-201ENST00000623862 2313 ntBASIC2.98□□□□□ -1.93
CLIP4Q8N3C7 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
CLIP4Q8N3C7 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CLIP4Q8N3C7 ZNF807-201ENST00000328088 1707 ntBASIC2.97□□□□□ -1.93
CLIP4Q8N3C7 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.97□□□□□ -1.93
CLIP4Q8N3C7 RNU6-562P-201ENST00000362731 107 ntBASIC2.97□□□□□ -1.93
CLIP4Q8N3C7 Y_RNA.315-201ENST00000365117 102 ntBASIC2.97□□□□□ -1.93
CLIP4Q8N3C7 U8.9-201ENST00000365667 134 ntBASIC2.97□□□□□ -1.93
CLIP4Q8N3C7 SNORD116-29-201ENST00000384516 83 ntBASIC2.97□□□□□ -1.93
CLIP4Q8N3C7 MIR301A-201ENST00000385261 86 ntBASIC2.97□□□□□ -1.93
CLIP4Q8N3C7 AL031121.1-201ENST00000406553 254 ntBASIC2.97□□□□□ -1.93
CLIP4Q8N3C7 RPL5P18-201ENST00000406671 891 ntBASIC2.97□□□□□ -1.93
CLIP4Q8N3C7 AL591034.1-201ENST00000407447 340 ntBASIC2.97□□□□□ -1.93
CLIP4Q8N3C7 Z85995.1-201ENST00000415547 335 ntBASIC2.97□□□□□ -1.93
CLIP4Q8N3C7 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.97□□□□□ -1.93
CLIP4Q8N3C7 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.97□□□□□ -1.93
CLIP4Q8N3C7 RPS24P13-201ENST00000442520 397 ntBASIC2.97□□□□□ -1.93
CLIP4Q8N3C7 AL360271.2-201ENST00000447710 161 ntBASIC2.97□□□□□ -1.93
CLIP4Q8N3C7 MTND1P17-201ENST00000448961 204 ntBASIC2.97□□□□□ -1.93
CLIP4Q8N3C7 AC008155.2-201ENST00000464337 397 ntBASIC2.97□□□□□ -1.93
CLIP4Q8N3C7 RPS23P3-201ENST00000470993 430 ntBASIC2.97□□□□□ -1.93
CLIP4Q8N3C7 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.97□□□□□ -1.93
CLIP4Q8N3C7 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.97□□□□□ -1.93
CLIP4Q8N3C7 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.97□□□□□ -1.93
CLIP4Q8N3C7 AC093249.1-201ENST00000567049 203 ntBASIC2.97□□□□□ -1.93
CLIP4Q8N3C7 MIR1273C-201ENST00000578669 77 ntBASIC2.97□□□□□ -1.93
CLIP4Q8N3C7 AC004832.5-201ENST00000608677 401 ntBASIC2.97□□□□□ -1.93
CLIP4Q8N3C7 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.97□□□□□ -1.93
CLIP4Q8N3C7 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.97□□□□□ -1.93
CLIP4Q8N3C7 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CLIP4Q8N3C7 Z83843.1-201ENST00000604070 3685 ntBASIC2.97□□□□□ -1.93
CLIP4Q8N3C7 ZNF519P1-201ENST00000449011 1626 ntBASIC2.97□□□□□ -1.93
CLIP4Q8N3C7 AC110774.1-201ENST00000623567 2018 ntBASIC2.97□□□□□ -1.93
CLIP4Q8N3C7 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.93
CLIP4Q8N3C7 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.96□□□□□ -1.94
CLIP4Q8N3C7 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC2.96□□□□□ -1.94
CLIP4Q8N3C7 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CLIP4Q8N3C7 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CLIP4Q8N3C7 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.96□□□□□ -1.94
CLIP4Q8N3C7 Y_RNA.135-201ENST00000363439 95 ntBASIC2.96□□□□□ -1.94
CLIP4Q8N3C7 RNU6-266P-201ENST00000364225 107 ntBASIC2.96□□□□□ -1.94
CLIP4Q8N3C7 SNORA62.3-201ENST00000365110 153 ntBASIC2.96□□□□□ -1.94
CLIP4Q8N3C7 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CLIP4Q8N3C7 RNU6-43P-201ENST00000384302 107 ntBASIC2.96□□□□□ -1.94
CLIP4Q8N3C7 Y_RNA.480-201ENST00000384364 102 ntBASIC2.96□□□□□ -1.94
CLIP4Q8N3C7 snosnR66.1-201ENST00000391095 99 ntBASIC2.96□□□□□ -1.94
CLIP4Q8N3C7 AL590004.1-201ENST00000405321 300 ntBASIC2.96□□□□□ -1.94
CLIP4Q8N3C7 RNU6-370P-201ENST00000411008 104 ntBASIC2.96□□□□□ -1.94
CLIP4Q8N3C7 AL353729.1-201ENST00000425044 720 ntBASIC2.96□□□□□ -1.94
CLIP4Q8N3C7 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.96□□□□□ -1.94
CLIP4Q8N3C7 AC007919.1-201ENST00000429380 217 ntBASIC2.96□□□□□ -1.94
CLIP4Q8N3C7 SNAP23P1-201ENST00000433229 246 ntBASIC2.96□□□□□ -1.94
CLIP4Q8N3C7 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.96□□□□□ -1.94
CLIP4Q8N3C7 MTCYBP6-201ENST00000441810 138 ntBASIC2.96□□□□□ -1.94
CLIP4Q8N3C7 RPS20P22-201ENST00000473700 357 ntBASIC2.96□□□□□ -1.94
CLIP4Q8N3C7 AC027575.1-201ENST00000481064 460 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms