Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 7SK.7-201ENST00000603504 247 ntBASIC3.91□□□□□ -1.78
SYNE4Q8N205 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.91□□□□□ -1.78
SYNE4Q8N205 AC007792.1-201ENST00000623023 402 ntBASIC3.91□□□□□ -1.78
SYNE4Q8N205 AC092608.2-201ENST00000624427 218 ntBASIC3.91□□□□□ -1.78
SYNE4Q8N205 AC010733.2-201ENST00000589496 5702 ntBASIC3.91□□□□□ -1.78
SYNE4Q8N205 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SYNE4Q8N205 AL049641.1-201ENST00000441055 1948 ntBASIC3.9□□□□□ -1.78
SYNE4Q8N205 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SYNE4Q8N205 SNORA71.1-201ENST00000364523 117 ntBASIC3.9□□□□□ -1.79
SYNE4Q8N205 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SYNE4Q8N205 RNU6-946P-201ENST00000383878 107 ntBASIC3.9□□□□□ -1.79
SYNE4Q8N205 Y_RNA.463-201ENST00000384271 102 ntBASIC3.9□□□□□ -1.79
SYNE4Q8N205 Y_RNA.557-201ENST00000384680 107 ntBASIC3.9□□□□□ -1.79
SYNE4Q8N205 MIR450B-201ENST00000401182 78 ntBASIC3.9□□□□□ -1.79
SYNE4Q8N205 MRPL42P3-201ENST00000401492 326 ntBASIC3.9□□□□□ -1.79
SYNE4Q8N205 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.9□□□□□ -1.79
SYNE4Q8N205 UBE2FP1-201ENST00000416536 447 ntBASIC3.9□□□□□ -1.79
SYNE4Q8N205 TOMM22P1-201ENST00000418578 312 ntBASIC3.9□□□□□ -1.79
SYNE4Q8N205 AL139396.1-201ENST00000421137 167 ntBASIC3.9□□□□□ -1.79
SYNE4Q8N205 NUP35P1-201ENST00000422734 947 ntBASIC3.9□□□□□ -1.79
SYNE4Q8N205 CST9LP2-201ENST00000437612 320 ntBASIC3.9□□□□□ -1.79
SYNE4Q8N205 TXNP1-201ENST00000441872 371 ntBASIC3.9□□□□□ -1.79
SYNE4Q8N205 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.9□□□□□ -1.79
SYNE4Q8N205 RPL12P25-201ENST00000455592 494 ntBASIC3.9□□□□□ -1.79
SYNE4Q8N205 RPL7P47-201ENST00000497299 556 ntBASIC3.9□□□□□ -1.79
SYNE4Q8N205 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.9□□□□□ -1.79
SYNE4Q8N205 HIGD1AP13-201ENST00000509878 289 ntBASIC3.9□□□□□ -1.79
SYNE4Q8N205 RNU6-123P-201ENST00000516163 102 ntBASIC3.9□□□□□ -1.79
SYNE4Q8N205 RNU6-685P-201ENST00000517088 95 ntBASIC3.9□□□□□ -1.79
SYNE4Q8N205 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.9□□□□□ -1.79
SYNE4Q8N205 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SYNE4Q8N205 GTF3AP2-201ENST00000557014 266 ntBASIC3.9□□□□□ -1.79
SYNE4Q8N205 MIR3162-201ENST00000581818 82 ntBASIC3.9□□□□□ -1.79
SYNE4Q8N205 MIR5690-201ENST00000583739 73 ntBASIC3.9□□□□□ -1.79
SYNE4Q8N205 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.9□□□□□ -1.79
SYNE4Q8N205 MIR5692C1-201ENST00000585309 91 ntBASIC3.9□□□□□ -1.79
SYNE4Q8N205 AL034351.1-201ENST00000605288 668 ntBASIC3.9□□□□□ -1.79
SYNE4Q8N205 AC083806.3-201ENST00000614016 455 ntBASIC3.9□□□□□ -1.79
SYNE4Q8N205 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.9□□□□□ -1.79
SYNE4Q8N205 AL589994.2-201ENST00000621124 579 ntBASIC3.9□□□□□ -1.79
SYNE4Q8N205 AC099506.2-201ENST00000623074 221 ntBASIC3.9□□□□□ -1.79
SYNE4Q8N205 CDC27P3-201ENST00000635418 1910 ntBASIC3.89□□□□□ -1.79
SYNE4Q8N205 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.89□□□□□ -1.79
SYNE4Q8N205 AL136964.1-201ENST00000622038 2990 ntBASIC3.89□□□□□ -1.79
SYNE4Q8N205 Y_RNA.158-201ENST00000363651 101 ntBASIC3.89□□□□□ -1.79
SYNE4Q8N205 RNU6-1032P-201ENST00000384100 107 ntBASIC3.89□□□□□ -1.79
SYNE4Q8N205 RNU6-882P-201ENST00000391025 103 ntBASIC3.89□□□□□ -1.79
SYNE4Q8N205 NDUFS5P1-201ENST00000405668 289 ntBASIC3.89□□□□□ -1.79
SYNE4Q8N205 RNU2-43P-201ENST00000410306 190 ntBASIC3.89□□□□□ -1.79
SYNE4Q8N205 RPL21P24-201ENST00000413752 448 ntBASIC3.89□□□□□ -1.79
SYNE4Q8N205 EEF1A1P41-201ENST00000414667 207 ntBASIC3.89□□□□□ -1.79
SYNE4Q8N205 AC092809.3-201ENST00000415453 231 ntBASIC3.89□□□□□ -1.79
SYNE4Q8N205 AC114482.1-201ENST00000418010 247 ntBASIC3.89□□□□□ -1.79
SYNE4Q8N205 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.89□□□□□ -1.79
SYNE4Q8N205 RPL36AP6-201ENST00000435770 321 ntBASIC3.89□□□□□ -1.79
SYNE4Q8N205 AC090774.1-201ENST00000435925 246 ntBASIC3.89□□□□□ -1.79
SYNE4Q8N205 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.89□□□□□ -1.79
SYNE4Q8N205 RPL37P4-201ENST00000448908 268 ntBASIC3.89□□□□□ -1.79
SYNE4Q8N205 AL162389.1-201ENST00000449233 177 ntBASIC3.89□□□□□ -1.79
SYNE4Q8N205 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.89□□□□□ -1.79
SYNE4Q8N205 Y_RNA.670-201ENST00000516255 105 ntBASIC3.89□□□□□ -1.79
SYNE4Q8N205 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.89□□□□□ -1.79
SYNE4Q8N205 NDUFB9P3-201ENST00000521269 501 ntBASIC3.89□□□□□ -1.79
SYNE4Q8N205 AP004371.1-201ENST00000525240 214 ntBASIC3.89□□□□□ -1.79
SYNE4Q8N205 TUG1_2.1-201ENST00000614234 87 ntBASIC3.89□□□□□ -1.79
SYNE4Q8N205 IGHVIII-44-202ENST00000636235 289 ntBASIC3.89□□□□□ -1.79
SYNE4Q8N205 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SYNE4Q8N205 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.89□□□□□ -1.79
SYNE4Q8N205 AC093908.1-201ENST00000623125 8092 ntBASIC3.89□□□□□ -1.79
SYNE4Q8N205 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.89□□□□□ -1.79
SYNE4Q8N205 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.89□□□□□ -1.79
SYNE4Q8N205 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SYNE4Q8N205 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SYNE4Q8N205 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
SYNE4Q8N205 RNU6-701P-201ENST00000384059 107 ntBASIC3.88□□□□□ -1.79
SYNE4Q8N205 RNY1P14-201ENST00000384426 108 ntBASIC3.88□□□□□ -1.79
SYNE4Q8N205 SNORD70.1-201ENST00000391007 85 ntBASIC3.88□□□□□ -1.79
SYNE4Q8N205 AL360182.1-201ENST00000397433 468 ntBASIC3.88□□□□□ -1.79
SYNE4Q8N205 AL445529.1-201ENST00000398713 389 ntBASIC3.88□□□□□ -1.79
SYNE4Q8N205 AL669831.1-202ENST00000428504 417 ntBASIC3.88□□□□□ -1.79
SYNE4Q8N205 AC004866.2-201ENST00000438285 481 ntBASIC3.88□□□□□ -1.79
SYNE4Q8N205 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.88□□□□□ -1.79
SYNE4Q8N205 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.88□□□□□ -1.79
SYNE4Q8N205 AL731563.1-201ENST00000442202 214 ntBASIC3.88□□□□□ -1.79
SYNE4Q8N205 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.88□□□□□ -1.79
SYNE4Q8N205 HMGN2P21-201ENST00000447764 270 ntBASIC3.88□□□□□ -1.79
SYNE4Q8N205 SNORD97-201ENST00000459187 142 ntBASIC3.88□□□□□ -1.79
SYNE4Q8N205 RN7SL283P-201ENST00000489055 303 ntBASIC3.88□□□□□ -1.79
SYNE4Q8N205 AC091826.1-201ENST00000514065 313 ntBASIC3.88□□□□□ -1.79
SYNE4Q8N205 RNU6-976P-201ENST00000516086 111 ntBASIC3.88□□□□□ -1.79
SYNE4Q8N205 RNU6-764P-201ENST00000516396 105 ntBASIC3.88□□□□□ -1.79
SYNE4Q8N205 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.88□□□□□ -1.79
SYNE4Q8N205 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
SYNE4Q8N205 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
SYNE4Q8N205 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.88□□□□□ -1.79
SYNE4Q8N205 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.88□□□□□ -1.79
SYNE4Q8N205 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.88□□□□□ -1.79
SYNE4Q8N205 NUTF2P8-201ENST00000604593 363 ntBASIC3.88□□□□□ -1.79
SYNE4Q8N205 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.88□□□□□ -1.79
SYNE4Q8N205 AC009229.3-201ENST00000608056 282 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms