Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.11□□□□□ -2.07
CCDC50Q8IVM0 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CCDC50Q8IVM0 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CCDC50Q8IVM0 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CCDC50Q8IVM0 AL354685.2-201ENST00000448218 1447 ntBASIC2.1□□□□□ -2.07
CCDC50Q8IVM0 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CCDC50Q8IVM0 RNU5E-1-201ENST00000362477 120 ntBASIC2.1□□□□□ -2.07
CCDC50Q8IVM0 Y_RNA.33-201ENST00000362591 102 ntBASIC2.1□□□□□ -2.07
CCDC50Q8IVM0 RNU6-486P-201ENST00000363116 107 ntBASIC2.1□□□□□ -2.07
CCDC50Q8IVM0 RNU5F-7P-201ENST00000363696 115 ntBASIC2.1□□□□□ -2.07
CCDC50Q8IVM0 AL445529.1-201ENST00000398713 389 ntBASIC2.1□□□□□ -2.07
CCDC50Q8IVM0 CIR1P3-201ENST00000405137 479 ntBASIC2.1□□□□□ -2.07
CCDC50Q8IVM0 FTH1P15-201ENST00000406984 280 ntBASIC2.1□□□□□ -2.07
CCDC50Q8IVM0 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.1□□□□□ -2.07
CCDC50Q8IVM0 AL356320.1-201ENST00000429616 163 ntBASIC2.1□□□□□ -2.07
CCDC50Q8IVM0 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.1□□□□□ -2.07
CCDC50Q8IVM0 AL583843.1-201ENST00000456070 346 ntBASIC2.1□□□□□ -2.07
CCDC50Q8IVM0 RNU7-125P-201ENST00000458760 62 ntBASIC2.1□□□□□ -2.07
CCDC50Q8IVM0 UBE2DNL-203ENST00000474922 222 ntBASIC2.1□□□□□ -2.07
CCDC50Q8IVM0 AP000797.1-201ENST00000478870 387 ntBASIC2.1□□□□□ -2.07
CCDC50Q8IVM0 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.1□□□□□ -2.07
CCDC50Q8IVM0 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.1□□□□□ -2.07
CCDC50Q8IVM0 RNA5SP112-201ENST00000515937 99 ntBASIC2.1□□□□□ -2.07
CCDC50Q8IVM0 RNU7-51P-201ENST00000516560 62 ntBASIC2.1□□□□□ -2.07
CCDC50Q8IVM0 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.1□□□□□ -2.07
CCDC50Q8IVM0 EEF1A1P37-201ENST00000522748 715 ntBASIC2.1□□□□□ -2.07
CCDC50Q8IVM0 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.1□□□□□ -2.07
CCDC50Q8IVM0 AC011979.2-201ENST00000527568 352 ntBASIC2.1□□□□□ -2.07
CCDC50Q8IVM0 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.1□□□□□ -2.07
CCDC50Q8IVM0 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.1□□□□□ -2.07
CCDC50Q8IVM0 MIR3122-201ENST00000577243 73 ntBASIC2.1□□□□□ -2.07
CCDC50Q8IVM0 MIR548AB-201ENST00000584917 84 ntBASIC2.1□□□□□ -2.07
CCDC50Q8IVM0 AL158032.1-201ENST00000605401 106 ntBASIC2.1□□□□□ -2.07
CCDC50Q8IVM0 RNU6-87P-201ENST00000607561 108 ntBASIC2.1□□□□□ -2.07
CCDC50Q8IVM0 AC004223.4-201ENST00000612426 332 ntBASIC2.1□□□□□ -2.07
CCDC50Q8IVM0 MIR7844-201ENST00000616161 122 ntBASIC2.1□□□□□ -2.07
CCDC50Q8IVM0 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
CCDC50Q8IVM0 HSPA8P4-201ENST00000511877 1920 ntBASIC2.09□□□□□ -2.07
CCDC50Q8IVM0 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.09□□□□□ -2.07
CCDC50Q8IVM0 TEX21P-201ENST00000447107 1476 ntBASIC2.09□□□□□ -2.07
CCDC50Q8IVM0 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
CCDC50Q8IVM0 RNU5E-5P-201ENST00000365379 116 ntBASIC2.09□□□□□ -2.07
CCDC50Q8IVM0 RNU6-748P-201ENST00000384648 107 ntBASIC2.09□□□□□ -2.07
CCDC50Q8IVM0 Y_RNA.560-201ENST00000384689 102 ntBASIC2.09□□□□□ -2.07
CCDC50Q8IVM0 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
CCDC50Q8IVM0 RNA5SP489-201ENST00000410986 109 ntBASIC2.09□□□□□ -2.07
CCDC50Q8IVM0 Z98742.3-201ENST00000418637 326 ntBASIC2.09□□□□□ -2.07
CCDC50Q8IVM0 AC097463.2-201ENST00000421074 142 ntBASIC2.09□□□□□ -2.07
CCDC50Q8IVM0 RPS3AP44-201ENST00000425466 790 ntBASIC2.09□□□□□ -2.07
CCDC50Q8IVM0 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.09□□□□□ -2.07
CCDC50Q8IVM0 AC119618.1-201ENST00000434191 222 ntBASIC2.09□□□□□ -2.07
CCDC50Q8IVM0 UBE2D3P1-201ENST00000436669 444 ntBASIC2.09□□□□□ -2.07
CCDC50Q8IVM0 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.09□□□□□ -2.07
CCDC50Q8IVM0 PSPHP1-201ENST00000450062 261 ntBASIC2.09□□□□□ -2.07
CCDC50Q8IVM0 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.09□□□□□ -2.07
CCDC50Q8IVM0 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.09□□□□□ -2.07
CCDC50Q8IVM0 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.09□□□□□ -2.07
CCDC50Q8IVM0 MIR892C-201ENST00000516410 77 ntBASIC2.09□□□□□ -2.07
CCDC50Q8IVM0 RNU6-1220P-201ENST00000517126 108 ntBASIC2.09□□□□□ -2.07
CCDC50Q8IVM0 FAM92A1P1-201ENST00000528023 890 ntBASIC2.09□□□□□ -2.07
CCDC50Q8IVM0 AC002400.1-201ENST00000569310 726 ntBASIC2.09□□□□□ -2.07
CCDC50Q8IVM0 DEFB131E-202ENST00000602581 683 ntBASIC2.09□□□□□ -2.07
CCDC50Q8IVM0 AL022161.1-201ENST00000604390 213 ntBASIC2.09□□□□□ -2.07
CCDC50Q8IVM0 AC138749.5-201ENST00000611461 208 ntBASIC2.09□□□□□ -2.07
CCDC50Q8IVM0 AL161423.1-201ENST00000613700 262 ntBASIC2.09□□□□□ -2.07
CCDC50Q8IVM0 AC116165.2-201ENST00000616705 206 ntBASIC2.09□□□□□ -2.07
CCDC50Q8IVM0 AC131159.1-201ENST00000621854 213 ntBASIC2.09□□□□□ -2.07
CCDC50Q8IVM0 AC024940.5-201ENST00000622889 474 ntBASIC2.09□□□□□ -2.07
CCDC50Q8IVM0 AC099654.13-201ENST00000639774 207 ntBASIC2.09□□□□□ -2.07
CCDC50Q8IVM0 RNA5SP508-201ENST00000411327 119 ntBASIC2.08□□□□□ -2.08
CCDC50Q8IVM0 AL135786.1-201ENST00000415892 214 ntBASIC2.08□□□□□ -2.08
CCDC50Q8IVM0 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.08□□□□□ -2.08
CCDC50Q8IVM0 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.08□□□□□ -2.08
CCDC50Q8IVM0 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.08□□□□□ -2.08
CCDC50Q8IVM0 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.08□□□□□ -2.08
CCDC50Q8IVM0 KATNBL1P6-201ENST00000453433 915 ntBASIC2.08□□□□□ -2.08
CCDC50Q8IVM0 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.08□□□□□ -2.08
CCDC50Q8IVM0 snoU109.2-201ENST00000459316 135 ntBASIC2.08□□□□□ -2.08
CCDC50Q8IVM0 AC140059.1-201ENST00000489238 361 ntBASIC2.08□□□□□ -2.08
CCDC50Q8IVM0 AC005178.1-201ENST00000508392 440 ntBASIC2.08□□□□□ -2.08
CCDC50Q8IVM0 AC008526.1-201ENST00000509149 338 ntBASIC2.08□□□□□ -2.08
CCDC50Q8IVM0 AF213884.2-201ENST00000510417 903 ntBASIC2.08□□□□□ -2.08
CCDC50Q8IVM0 AC119751.5-201ENST00000514077 770 ntBASIC2.08□□□□□ -2.08
CCDC50Q8IVM0 RNU6-759P-201ENST00000516740 103 ntBASIC2.08□□□□□ -2.08
CCDC50Q8IVM0 IGKV3-31-201ENST00000523109 329 ntBASIC2.08□□□□□ -2.08
CCDC50Q8IVM0 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CCDC50Q8IVM0 AL133241.1-201ENST00000556832 487 ntBASIC2.08□□□□□ -2.08
CCDC50Q8IVM0 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CCDC50Q8IVM0 WISP1-OT1-201ENST00000602893 642 ntBASIC2.08□□□□□ -2.08
CCDC50Q8IVM0 AC112191.3-201ENST00000604371 277 ntBASIC2.08□□□□□ -2.08
CCDC50Q8IVM0 AL138963.2-201ENST00000605137 226 ntBASIC2.08□□□□□ -2.08
CCDC50Q8IVM0 AL162373.1-201ENST00000620433 407 ntBASIC2.08□□□□□ -2.08
CCDC50Q8IVM0 AC009878.1-201ENST00000621819 340 ntBASIC2.08□□□□□ -2.08
CCDC50Q8IVM0 AC138627.2-201ENST00000624202 601 ntBASIC2.08□□□□□ -2.08
CCDC50Q8IVM0 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CCDC50Q8IVM0 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CCDC50Q8IVM0 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.07□□□□□ -2.08
CCDC50Q8IVM0 RNU1-148P-201ENST00000384472 162 ntBASIC2.07□□□□□ -2.08
CCDC50Q8IVM0 MIR17-201ENST00000385012 84 ntBASIC2.07□□□□□ -2.08
CCDC50Q8IVM0 RNU6-1140P-201ENST00000410517 106 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 143.8 ms