Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 OR11H5P-201ENST00000554039 926 ntBASIC2□□□□□ -2.09
NUDCD3Q8IVD9 AC025678.1-201ENST00000567861 338 ntBASIC2□□□□□ -2.09
NUDCD3Q8IVD9 AC010378.1-201ENST00000619270 362 ntBASIC2□□□□□ -2.09
NUDCD3Q8IVD9 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
NUDCD3Q8IVD9 AC006020.1-201ENST00000420179 1854 ntBASIC2□□□□□ -2.09
NUDCD3Q8IVD9 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
NUDCD3Q8IVD9 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2□□□□□ -2.09
NUDCD3Q8IVD9 KPNA2P1-201ENST00000458289 1591 ntBASIC1.99□□□□□ -2.09
NUDCD3Q8IVD9 RNU5E-1-201ENST00000362477 120 ntBASIC1.99□□□□□ -2.09
NUDCD3Q8IVD9 RNU1-72P-201ENST00000362976 153 ntBASIC1.99□□□□□ -2.09
NUDCD3Q8IVD9 RNU5E-5P-201ENST00000365379 116 ntBASIC1.99□□□□□ -2.09
NUDCD3Q8IVD9 RNU6-395P-201ENST00000365662 106 ntBASIC1.99□□□□□ -2.09
NUDCD3Q8IVD9 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.99□□□□□ -2.09
NUDCD3Q8IVD9 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
NUDCD3Q8IVD9 MIR676-201ENST00000390702 67 ntBASIC1.99□□□□□ -2.09
NUDCD3Q8IVD9 FTH1P15-201ENST00000406984 280 ntBASIC1.99□□□□□ -2.09
NUDCD3Q8IVD9 RNA5SP270-201ENST00000411361 118 ntBASIC1.99□□□□□ -2.09
NUDCD3Q8IVD9 AC016831.2-201ENST00000417179 352 ntBASIC1.99□□□□□ -2.09
NUDCD3Q8IVD9 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC1.99□□□□□ -2.09
NUDCD3Q8IVD9 AL356583.2-201ENST00000426536 280 ntBASIC1.99□□□□□ -2.09
NUDCD3Q8IVD9 AC016691.1-201ENST00000441321 413 ntBASIC1.99□□□□□ -2.09
NUDCD3Q8IVD9 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.99□□□□□ -2.09
NUDCD3Q8IVD9 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.99□□□□□ -2.09
NUDCD3Q8IVD9 AC003071.1-201ENST00000451219 789 ntBASIC1.99□□□□□ -2.09
NUDCD3Q8IVD9 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.99□□□□□ -2.09
NUDCD3Q8IVD9 RN7SL274P-201ENST00000492268 272 ntBASIC1.99□□□□□ -2.09
NUDCD3Q8IVD9 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.99□□□□□ -2.09
NUDCD3Q8IVD9 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.99□□□□□ -2.09
NUDCD3Q8IVD9 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.99□□□□□ -2.09
NUDCD3Q8IVD9 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.99□□□□□ -2.09
NUDCD3Q8IVD9 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.99□□□□□ -2.09
NUDCD3Q8IVD9 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.99□□□□□ -2.09
NUDCD3Q8IVD9 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.99□□□□□ -2.09
NUDCD3Q8IVD9 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.99□□□□□ -2.09
NUDCD3Q8IVD9 HMGN1P30-201ENST00000589286 268 ntBASIC1.99□□□□□ -2.09
NUDCD3Q8IVD9 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.99□□□□□ -2.09
NUDCD3Q8IVD9 AL670379.10-201ENST00000604330 253 ntBASIC1.99□□□□□ -2.09
NUDCD3Q8IVD9 AL138963.2-201ENST00000605137 226 ntBASIC1.99□□□□□ -2.09
NUDCD3Q8IVD9 AL670379.9-201ENST00000605428 253 ntBASIC1.99□□□□□ -2.09
NUDCD3Q8IVD9 AC126118.1-201ENST00000607744 628 ntBASIC1.99□□□□□ -2.09
NUDCD3Q8IVD9 AC009233.1-201ENST00000616477 371 ntBASIC1.99□□□□□ -2.09
NUDCD3Q8IVD9 MIR6852-201ENST00000621699 66 ntBASIC1.99□□□□□ -2.09
NUDCD3Q8IVD9 AC009878.1-201ENST00000621819 340 ntBASIC1.99□□□□□ -2.09
NUDCD3Q8IVD9 AC131159.1-201ENST00000621854 213 ntBASIC1.99□□□□□ -2.09
NUDCD3Q8IVD9 AC024940.5-201ENST00000622889 474 ntBASIC1.99□□□□□ -2.09
NUDCD3Q8IVD9 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
NUDCD3Q8IVD9 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
NUDCD3Q8IVD9 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
NUDCD3Q8IVD9 AC073343.1-201ENST00000328239 651 ntBASIC1.98□□□□□ -2.09
NUDCD3Q8IVD9 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
NUDCD3Q8IVD9 MRPL42P2-201ENST00000403169 426 ntBASIC1.98□□□□□ -2.09
NUDCD3Q8IVD9 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.98□□□□□ -2.09
NUDCD3Q8IVD9 AC114491.1-201ENST00000416095 246 ntBASIC1.98□□□□□ -2.09
NUDCD3Q8IVD9 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.98□□□□□ -2.09
NUDCD3Q8IVD9 AL353621.1-201ENST00000418219 243 ntBASIC1.98□□□□□ -2.09
NUDCD3Q8IVD9 MTND2P9-201ENST00000422293 931 ntBASIC1.98□□□□□ -2.09
NUDCD3Q8IVD9 AC137499.1-201ENST00000427602 88 ntBASIC1.98□□□□□ -2.09
NUDCD3Q8IVD9 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.98□□□□□ -2.09
NUDCD3Q8IVD9 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.98□□□□□ -2.09
NUDCD3Q8IVD9 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.98□□□□□ -2.09
NUDCD3Q8IVD9 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.98□□□□□ -2.09
NUDCD3Q8IVD9 USP9YP12-201ENST00000450481 570 ntBASIC1.98□□□□□ -2.09
NUDCD3Q8IVD9 MTCO2P29-201ENST00000465212 189 ntBASIC1.98□□□□□ -2.09
NUDCD3Q8IVD9 AC018437.1-201ENST00000492214 406 ntBASIC1.98□□□□□ -2.09
NUDCD3Q8IVD9 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.98□□□□□ -2.09
NUDCD3Q8IVD9 AC005178.1-201ENST00000508392 440 ntBASIC1.98□□□□□ -2.09
NUDCD3Q8IVD9 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.98□□□□□ -2.09
NUDCD3Q8IVD9 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.98□□□□□ -2.09
NUDCD3Q8IVD9 RNU2-19P-201ENST00000517288 84 ntBASIC1.98□□□□□ -2.09
NUDCD3Q8IVD9 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.98□□□□□ -2.09
NUDCD3Q8IVD9 AC079598.5-201ENST00000547460 117 ntBASIC1.98□□□□□ -2.09
NUDCD3Q8IVD9 ZNF321P-202ENST00000550843 495 ntBASIC1.98□□□□□ -2.09
NUDCD3Q8IVD9 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.98□□□□□ -2.09
NUDCD3Q8IVD9 MIR4672-201ENST00000583126 81 ntBASIC1.98□□□□□ -2.09
NUDCD3Q8IVD9 AL353778.1-201ENST00000603149 408 ntBASIC1.98□□□□□ -2.09
NUDCD3Q8IVD9 AC112191.3-201ENST00000604371 277 ntBASIC1.98□□□□□ -2.09
NUDCD3Q8IVD9 AL022154.1-201ENST00000604698 785 ntBASIC1.98□□□□□ -2.09
NUDCD3Q8IVD9 AL158032.1-201ENST00000605401 106 ntBASIC1.98□□□□□ -2.09
NUDCD3Q8IVD9 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
NUDCD3Q8IVD9 AC099654.13-201ENST00000639774 207 ntBASIC1.98□□□□□ -2.09
NUDCD3Q8IVD9 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.97□□□□□ -2.09
NUDCD3Q8IVD9 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
NUDCD3Q8IVD9 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
NUDCD3Q8IVD9 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
NUDCD3Q8IVD9 SNORD3E-201ENST00000362899 217 ntBASIC1.97□□□□□ -2.09
NUDCD3Q8IVD9 Y_RNA.111-201ENST00000363248 100 ntBASIC1.97□□□□□ -2.09
NUDCD3Q8IVD9 MIR1302-8-201ENST00000408342 128 ntBASIC1.97□□□□□ -2.09
NUDCD3Q8IVD9 AL353706.1-201ENST00000436728 494 ntBASIC1.97□□□□□ -2.09
NUDCD3Q8IVD9 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC1.97□□□□□ -2.09
NUDCD3Q8IVD9 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.97□□□□□ -2.09
NUDCD3Q8IVD9 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.97□□□□□ -2.09
NUDCD3Q8IVD9 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.97□□□□□ -2.09
NUDCD3Q8IVD9 RN7SKP287-201ENST00000516546 266 ntBASIC1.97□□□□□ -2.09
NUDCD3Q8IVD9 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.97□□□□□ -2.09
NUDCD3Q8IVD9 IGKV3-31-201ENST00000523109 329 ntBASIC1.97□□□□□ -2.09
NUDCD3Q8IVD9 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.97□□□□□ -2.09
NUDCD3Q8IVD9 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
NUDCD3Q8IVD9 AC135279.1-201ENST00000543493 504 ntBASIC1.97□□□□□ -2.09
NUDCD3Q8IVD9 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.97□□□□□ -2.09
NUDCD3Q8IVD9 MIR5089-201ENST00000580047 84 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms