Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 SNORD56.5-201ENST00000364281 72 ntBASIC2.82□□□□□ -1.96
NPHP3Q7Z494 RNU5E-6P-201ENST00000365574 115 ntBASIC2.82□□□□□ -1.96
NPHP3Q7Z494 SNORA20.2-201ENST00000383922 131 ntBASIC2.82□□□□□ -1.96
NPHP3Q7Z494 FO393413.1-201ENST00000402892 195 ntBASIC2.82□□□□□ -1.96
NPHP3Q7Z494 C1DP2-201ENST00000418167 426 ntBASIC2.82□□□□□ -1.96
NPHP3Q7Z494 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.82□□□□□ -1.96
NPHP3Q7Z494 RPL31P35-201ENST00000431058 377 ntBASIC2.82□□□□□ -1.96
NPHP3Q7Z494 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.82□□□□□ -1.96
NPHP3Q7Z494 FABP5P13-201ENST00000452144 328 ntBASIC2.82□□□□□ -1.96
NPHP3Q7Z494 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.82□□□□□ -1.96
NPHP3Q7Z494 RPL26P9-201ENST00000457466 433 ntBASIC2.82□□□□□ -1.96
NPHP3Q7Z494 TPT1P7-201ENST00000458300 517 ntBASIC2.82□□□□□ -1.96
NPHP3Q7Z494 KLF3P2-201ENST00000465138 268 ntBASIC2.82□□□□□ -1.96
NPHP3Q7Z494 MRPS17P3-201ENST00000465453 385 ntBASIC2.82□□□□□ -1.96
NPHP3Q7Z494 RPL31P41-201ENST00000477967 372 ntBASIC2.82□□□□□ -1.96
NPHP3Q7Z494 RPS29P20-201ENST00000489592 171 ntBASIC2.82□□□□□ -1.96
NPHP3Q7Z494 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.82□□□□□ -1.96
NPHP3Q7Z494 RN7SKP258-201ENST00000517151 304 ntBASIC2.82□□□□□ -1.96
NPHP3Q7Z494 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.82□□□□□ -1.96
NPHP3Q7Z494 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
NPHP3Q7Z494 AP002963.1-201ENST00000530590 184 ntBASIC2.82□□□□□ -1.96
NPHP3Q7Z494 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.82□□□□□ -1.96
NPHP3Q7Z494 NDUFAF4P1-201ENST00000559425 519 ntBASIC2.82□□□□□ -1.96
NPHP3Q7Z494 MTND1P15-201ENST00000579262 949 ntBASIC2.82□□□□□ -1.96
NPHP3Q7Z494 MIR3682-201ENST00000581338 84 ntBASIC2.82□□□□□ -1.96
NPHP3Q7Z494 AL589994.2-201ENST00000621124 579 ntBASIC2.82□□□□□ -1.96
NPHP3Q7Z494 YWHAEP7-203ENST00000622054 312 ntBASIC2.82□□□□□ -1.96
NPHP3Q7Z494 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.82□□□□□ -1.96
NPHP3Q7Z494 AC026241.1-201ENST00000517873 2142 ntBASIC2.82□□□□□ -1.96
NPHP3Q7Z494 WWP1P1-201ENST00000466609 2769 ntBASIC2.81□□□□□ -1.96
NPHP3Q7Z494 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
NPHP3Q7Z494 VTRNA1-1-201ENST00000363120 99 ntBASIC2.81□□□□□ -1.96
NPHP3Q7Z494 RNU6-1180P-201ENST00000364935 107 ntBASIC2.81□□□□□ -1.96
NPHP3Q7Z494 RNU6-169P-201ENST00000365336 107 ntBASIC2.81□□□□□ -1.96
NPHP3Q7Z494 SMIM11P1-201ENST00000369586 178 ntBASIC2.81□□□□□ -1.96
NPHP3Q7Z494 RNU6-321P-201ENST00000410912 106 ntBASIC2.81□□□□□ -1.96
NPHP3Q7Z494 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.81□□□□□ -1.96
NPHP3Q7Z494 RAC1P6-201ENST00000423911 575 ntBASIC2.81□□□□□ -1.96
NPHP3Q7Z494 DLGAP5P1-201ENST00000430307 464 ntBASIC2.81□□□□□ -1.96
NPHP3Q7Z494 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.81□□□□□ -1.96
NPHP3Q7Z494 AC073614.1-201ENST00000438690 650 ntBASIC2.81□□□□□ -1.96
NPHP3Q7Z494 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.81□□□□□ -1.96
NPHP3Q7Z494 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.81□□□□□ -1.96
NPHP3Q7Z494 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.81□□□□□ -1.96
NPHP3Q7Z494 AC105252.1-201ENST00000503089 286 ntBASIC2.81□□□□□ -1.96
NPHP3Q7Z494 RNU2-10P-201ENST00000516375 211 ntBASIC2.81□□□□□ -1.96
NPHP3Q7Z494 Vault.3-201ENST00000516676 95 ntBASIC2.81□□□□□ -1.96
NPHP3Q7Z494 SNORA31.15-201ENST00000516771 132 ntBASIC2.81□□□□□ -1.96
NPHP3Q7Z494 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.81□□□□□ -1.96
NPHP3Q7Z494 LRRC37A5P-203ENST00000580181 585 ntBASIC2.81□□□□□ -1.96
NPHP3Q7Z494 AL161734.1-201ENST00000609720 557 ntBASIC2.81□□□□□ -1.96
NPHP3Q7Z494 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.81□□□□□ -1.96
NPHP3Q7Z494 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.81□□□□□ -1.96
NPHP3Q7Z494 AC092656.1-203ENST00000624134 423 ntBASIC2.81□□□□□ -1.96
NPHP3Q7Z494 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
NPHP3Q7Z494 MTND4P35-201ENST00000604257 1375 ntBASIC2.8□□□□□ -1.96
NPHP3Q7Z494 MIR378A-201ENST00000362177 66 ntBASIC2.8□□□□□ -1.96
NPHP3Q7Z494 Y_RNA.245-201ENST00000364493 95 ntBASIC2.8□□□□□ -1.96
NPHP3Q7Z494 RNU4-75P-201ENST00000364621 146 ntBASIC2.8□□□□□ -1.96
NPHP3Q7Z494 RNU6-1119P-201ENST00000384349 108 ntBASIC2.8□□□□□ -1.96
NPHP3Q7Z494 MIR888-201ENST00000401186 77 ntBASIC2.8□□□□□ -1.96
NPHP3Q7Z494 RNU2-8P-201ENST00000410727 190 ntBASIC2.8□□□□□ -1.96
NPHP3Q7Z494 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.8□□□□□ -1.96
NPHP3Q7Z494 AL358075.3-201ENST00000426289 226 ntBASIC2.8□□□□□ -1.96
NPHP3Q7Z494 USP9YP14-201ENST00000430663 563 ntBASIC2.8□□□□□ -1.96
NPHP3Q7Z494 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.8□□□□□ -1.96
NPHP3Q7Z494 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.8□□□□□ -1.96
NPHP3Q7Z494 RPL23AP20-201ENST00000447965 421 ntBASIC2.8□□□□□ -1.96
NPHP3Q7Z494 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.8□□□□□ -1.96
NPHP3Q7Z494 SNORD97-201ENST00000459187 142 ntBASIC2.8□□□□□ -1.96
NPHP3Q7Z494 MTCO2P29-201ENST00000465212 189 ntBASIC2.8□□□□□ -1.96
NPHP3Q7Z494 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.8□□□□□ -1.96
NPHP3Q7Z494 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.8□□□□□ -1.96
NPHP3Q7Z494 MTCO3P7-201ENST00000510008 774 ntBASIC2.8□□□□□ -1.96
NPHP3Q7Z494 RNU6-927P-201ENST00000516199 100 ntBASIC2.8□□□□□ -1.96
NPHP3Q7Z494 RNA5SP471-201ENST00000516971 106 ntBASIC2.8□□□□□ -1.96
NPHP3Q7Z494 AC022634.1-201ENST00000520765 532 ntBASIC2.8□□□□□ -1.96
NPHP3Q7Z494 SUB1P1-201ENST00000524415 382 ntBASIC2.8□□□□□ -1.96
NPHP3Q7Z494 AC011979.2-201ENST00000527568 352 ntBASIC2.8□□□□□ -1.96
NPHP3Q7Z494 AC087241.2-201ENST00000535801 324 ntBASIC2.8□□□□□ -1.96
NPHP3Q7Z494 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.8□□□□□ -1.96
NPHP3Q7Z494 AC103987.3-201ENST00000582071 292 ntBASIC2.8□□□□□ -1.96
NPHP3Q7Z494 AC007363.1-201ENST00000604736 620 ntBASIC2.8□□□□□ -1.96
NPHP3Q7Z494 AC019159.1-201ENST00000605094 187 ntBASIC2.8□□□□□ -1.96
NPHP3Q7Z494 Y_RNA.783-201ENST00000613546 102 ntBASIC2.8□□□□□ -1.96
NPHP3Q7Z494 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.8□□□□□ -1.96
NPHP3Q7Z494 AL512643.1-201ENST00000635735 524 ntBASIC2.8□□□□□ -1.96
NPHP3Q7Z494 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
NPHP3Q7Z494 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.8□□□□□ -1.96
NPHP3Q7Z494 CR848007.1-201ENST00000442354 1699 ntBASIC2.79□□□□□ -1.96
NPHP3Q7Z494 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.79□□□□□ -1.96
NPHP3Q7Z494 RNU4-24P-201ENST00000364565 139 ntBASIC2.79□□□□□ -1.96
NPHP3Q7Z494 Y_RNA.508-201ENST00000384502 114 ntBASIC2.79□□□□□ -1.96
NPHP3Q7Z494 SNORA40.18-201ENST00000391200 128 ntBASIC2.79□□□□□ -1.96
NPHP3Q7Z494 RPL21P75-201ENST00000396599 483 ntBASIC2.79□□□□□ -1.96
NPHP3Q7Z494 RPL21P28-201ENST00000401418 483 ntBASIC2.79□□□□□ -1.96
NPHP3Q7Z494 FGF7P8-201ENST00000402994 292 ntBASIC2.79□□□□□ -1.96
NPHP3Q7Z494 AL592114.1-201ENST00000403842 483 ntBASIC2.79□□□□□ -1.96
NPHP3Q7Z494 MTND3P17-201ENST00000416968 344 ntBASIC2.79□□□□□ -1.96
NPHP3Q7Z494 AC137499.1-201ENST00000427602 88 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms