Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AP001596.2-201ENST00000608410 312 ntBASIC2.7□□□□□ -1.98
NUP54Q7Z3B4 AC090115.4-201ENST00000609970 188 ntBASIC2.7□□□□□ -1.98
NUP54Q7Z3B4 ATP5A1P2-202ENST00000616464 443 ntBASIC2.7□□□□□ -1.98
NUP54Q7Z3B4 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.7□□□□□ -1.98
NUP54Q7Z3B4 FO624990.1-201ENST00000636373 85 ntBASIC2.7□□□□□ -1.98
NUP54Q7Z3B4 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
NUP54Q7Z3B4 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.69□□□□□ -1.98
NUP54Q7Z3B4 AC004944.1-201ENST00000517807 3059 ntBASIC2.69□□□□□ -1.98
NUP54Q7Z3B4 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
NUP54Q7Z3B4 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
NUP54Q7Z3B4 RNU6-1072P-201ENST00000384703 107 ntBASIC2.69□□□□□ -1.98
NUP54Q7Z3B4 RNU6-443P-201ENST00000384780 107 ntBASIC2.69□□□□□ -1.98
NUP54Q7Z3B4 MIR578-201ENST00000384828 96 ntBASIC2.69□□□□□ -1.98
NUP54Q7Z3B4 RNU6-1158P-201ENST00000391167 107 ntBASIC2.69□□□□□ -1.98
NUP54Q7Z3B4 EEF1A1P41-201ENST00000414667 207 ntBASIC2.69□□□□□ -1.98
NUP54Q7Z3B4 BMS1P22-201ENST00000414726 313 ntBASIC2.69□□□□□ -1.98
NUP54Q7Z3B4 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
NUP54Q7Z3B4 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.69□□□□□ -1.98
NUP54Q7Z3B4 MTND1P34-201ENST00000438556 671 ntBASIC2.69□□□□□ -1.98
NUP54Q7Z3B4 NDUFB1P2-201ENST00000449477 176 ntBASIC2.69□□□□□ -1.98
NUP54Q7Z3B4 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.69□□□□□ -1.98
NUP54Q7Z3B4 AL118520.1-201ENST00000450770 291 ntBASIC2.69□□□□□ -1.98
NUP54Q7Z3B4 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.69□□□□□ -1.98
NUP54Q7Z3B4 NIPA2P5-201ENST00000452282 464 ntBASIC2.69□□□□□ -1.98
NUP54Q7Z3B4 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.69□□□□□ -1.98
NUP54Q7Z3B4 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.69□□□□□ -1.98
NUP54Q7Z3B4 AC090096.1-201ENST00000489168 390 ntBASIC2.69□□□□□ -1.98
NUP54Q7Z3B4 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.69□□□□□ -1.98
NUP54Q7Z3B4 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.69□□□□□ -1.98
NUP54Q7Z3B4 RNU6-506P-201ENST00000516553 94 ntBASIC2.69□□□□□ -1.98
NUP54Q7Z3B4 AP005435.4-201ENST00000529514 284 ntBASIC2.69□□□□□ -1.98
NUP54Q7Z3B4 AC104383.1-201ENST00000530297 370 ntBASIC2.69□□□□□ -1.98
NUP54Q7Z3B4 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
NUP54Q7Z3B4 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.69□□□□□ -1.98
NUP54Q7Z3B4 MIR5692A1-201ENST00000580523 69 ntBASIC2.69□□□□□ -1.98
NUP54Q7Z3B4 MTATP6P3-201ENST00000581686 676 ntBASIC2.69□□□□□ -1.98
NUP54Q7Z3B4 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.69□□□□□ -1.98
NUP54Q7Z3B4 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
NUP54Q7Z3B4 AL359198.2-201ENST00000611836 194 ntBASIC2.69□□□□□ -1.98
NUP54Q7Z3B4 AC135507.2-201ENST00000612443 309 ntBASIC2.69□□□□□ -1.98
NUP54Q7Z3B4 U6.42-201ENST00000618440 107 ntBASIC2.69□□□□□ -1.98
NUP54Q7Z3B4 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.69□□□□□ -1.98
NUP54Q7Z3B4 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.69□□□□□ -1.98
NUP54Q7Z3B4 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
NUP54Q7Z3B4 AC084035.1-201ENST00000634543 607 ntBASIC2.69□□□□□ -1.98
NUP54Q7Z3B4 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
NUP54Q7Z3B4 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.69□□□□□ -1.98
NUP54Q7Z3B4 ASNSP3-201ENST00000451989 1306 ntBASIC2.68□□□□□ -1.98
NUP54Q7Z3B4 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
NUP54Q7Z3B4 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
NUP54Q7Z3B4 Y_RNA.3-201ENST00000362331 103 ntBASIC2.68□□□□□ -1.98
NUP54Q7Z3B4 RNU6-1322P-201ENST00000364309 107 ntBASIC2.68□□□□□ -1.98
NUP54Q7Z3B4 RNU6-996P-201ENST00000365438 107 ntBASIC2.68□□□□□ -1.98
NUP54Q7Z3B4 Z98749.2-208ENST00000381646 500 ntBASIC2.68□□□□□ -1.98
NUP54Q7Z3B4 RNU6-517P-201ENST00000384362 110 ntBASIC2.68□□□□□ -1.98
NUP54Q7Z3B4 SNORA44-201ENST00000384584 132 ntBASIC2.68□□□□□ -1.98
NUP54Q7Z3B4 UBA52P6-201ENST00000399822 382 ntBASIC2.68□□□□□ -1.98
NUP54Q7Z3B4 CALM2P3-201ENST00000400429 449 ntBASIC2.68□□□□□ -1.98
NUP54Q7Z3B4 AL591416.1-201ENST00000404015 867 ntBASIC2.68□□□□□ -1.98
NUP54Q7Z3B4 AC096664.2-201ENST00000411843 406 ntBASIC2.68□□□□□ -1.98
NUP54Q7Z3B4 AC007064.1-201ENST00000412238 351 ntBASIC2.68□□□□□ -1.98
NUP54Q7Z3B4 UBE2V1P10-201ENST00000414685 269 ntBASIC2.68□□□□□ -1.98
NUP54Q7Z3B4 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.68□□□□□ -1.98
NUP54Q7Z3B4 AL161651.1-201ENST00000440882 223 ntBASIC2.68□□□□□ -1.98
NUP54Q7Z3B4 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.68□□□□□ -1.98
NUP54Q7Z3B4 AL360271.2-201ENST00000447710 161 ntBASIC2.68□□□□□ -1.98
NUP54Q7Z3B4 AC080013.2-201ENST00000460866 323 ntBASIC2.68□□□□□ -1.98
NUP54Q7Z3B4 AC082651.2-201ENST00000496833 166 ntBASIC2.68□□□□□ -1.98
NUP54Q7Z3B4 AC104136.1-201ENST00000512969 394 ntBASIC2.68□□□□□ -1.98
NUP54Q7Z3B4 SNORA40.12-201ENST00000516329 111 ntBASIC2.68□□□□□ -1.98
NUP54Q7Z3B4 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.68□□□□□ -1.98
NUP54Q7Z3B4 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.68□□□□□ -1.98
NUP54Q7Z3B4 AC006199.1-201ENST00000548728 219 ntBASIC2.68□□□□□ -1.98
NUP54Q7Z3B4 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.68□□□□□ -1.98
NUP54Q7Z3B4 LINC00933-203ENST00000559812 219 ntBASIC2.68□□□□□ -1.98
NUP54Q7Z3B4 MIR3199-1-201ENST00000582434 88 ntBASIC2.68□□□□□ -1.98
NUP54Q7Z3B4 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.68□□□□□ -1.98
NUP54Q7Z3B4 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.68□□□□□ -1.98
NUP54Q7Z3B4 MIR6134-201ENST00000617606 109 ntBASIC2.68□□□□□ -1.98
NUP54Q7Z3B4 AC068792.1-201ENST00000621354 417 ntBASIC2.68□□□□□ -1.98
NUP54Q7Z3B4 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
NUP54Q7Z3B4 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.68□□□□□ -1.98
NUP54Q7Z3B4 Z82209.1-201ENST00000422141 2135 ntBASIC2.68□□□□□ -1.98
NUP54Q7Z3B4 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.68□□□□□ -1.98
NUP54Q7Z3B4 AC006020.1-201ENST00000420179 1854 ntBASIC2.67□□□□□ -1.98
NUP54Q7Z3B4 RNU6-1085P-201ENST00000363576 107 ntBASIC2.67□□□□□ -1.98
NUP54Q7Z3B4 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
NUP54Q7Z3B4 Y_RNA.409-201ENST00000383990 98 ntBASIC2.67□□□□□ -1.98
NUP54Q7Z3B4 RNU6-19P-201ENST00000384718 107 ntBASIC2.67□□□□□ -1.98
NUP54Q7Z3B4 MIR147B-201ENST00000390185 80 ntBASIC2.67□□□□□ -1.98
NUP54Q7Z3B4 RNU6-903P-201ENST00000391270 109 ntBASIC2.67□□□□□ -1.98
NUP54Q7Z3B4 Y_RNA.623-201ENST00000411128 95 ntBASIC2.67□□□□□ -1.98
NUP54Q7Z3B4 RPL21P90-201ENST00000415692 466 ntBASIC2.67□□□□□ -1.98
NUP54Q7Z3B4 AL451074.5-201ENST00000415894 435 ntBASIC2.67□□□□□ -1.98
NUP54Q7Z3B4 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.67□□□□□ -1.98
NUP54Q7Z3B4 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.67□□□□□ -1.98
NUP54Q7Z3B4 AL627311.1-201ENST00000431514 115 ntBASIC2.67□□□□□ -1.98
NUP54Q7Z3B4 AC000111.3-201ENST00000433478 193 ntBASIC2.67□□□□□ -1.98
NUP54Q7Z3B4 AL606489.2-201ENST00000433886 234 ntBASIC2.67□□□□□ -1.98
NUP54Q7Z3B4 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms