Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SHFQ7M4L6 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SHFQ7M4L6 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
SHFQ7M4L6 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
SHFQ7M4L6 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
SHFQ7M4L6 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
SHFQ7M4L6 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.88□□□□□ -1.95
SHFQ7M4L6 RNU6-797P-201ENST00000363101 109 ntBASIC2.88□□□□□ -1.95
SHFQ7M4L6 Y_RNA.135-201ENST00000363439 95 ntBASIC2.88□□□□□ -1.95
SHFQ7M4L6 SNORA46-201ENST00000384762 135 ntBASIC2.88□□□□□ -1.95
SHFQ7M4L6 RNA5SP252-201ENST00000391131 119 ntBASIC2.88□□□□□ -1.95
SHFQ7M4L6 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.88□□□□□ -1.95
SHFQ7M4L6 RAP1BP3-201ENST00000407180 549 ntBASIC2.88□□□□□ -1.95
SHFQ7M4L6 MIR1193-201ENST00000408109 78 ntBASIC2.88□□□□□ -1.95
SHFQ7M4L6 SNORA11B-201ENST00000408175 129 ntBASIC2.88□□□□□ -1.95
SHFQ7M4L6 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.88□□□□□ -1.95
SHFQ7M4L6 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.88□□□□□ -1.95
SHFQ7M4L6 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC2.88□□□□□ -1.95
SHFQ7M4L6 RPL32P28-201ENST00000443577 397 ntBASIC2.88□□□□□ -1.95
SHFQ7M4L6 UQCRHP3-201ENST00000451503 251 ntBASIC2.88□□□□□ -1.95
SHFQ7M4L6 RNU7-138P-201ENST00000459479 64 ntBASIC2.88□□□□□ -1.95
SHFQ7M4L6 AC104472.2-201ENST00000469035 601 ntBASIC2.88□□□□□ -1.95
SHFQ7M4L6 AC079140.5-201ENST00000507882 310 ntBASIC2.88□□□□□ -1.95
SHFQ7M4L6 MTND3P22-201ENST00000510932 243 ntBASIC2.88□□□□□ -1.95
SHFQ7M4L6 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.88□□□□□ -1.95
SHFQ7M4L6 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.88□□□□□ -1.95
SHFQ7M4L6 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.88□□□□□ -1.95
SHFQ7M4L6 Y_RNA.691-201ENST00000516611 103 ntBASIC2.88□□□□□ -1.95
SHFQ7M4L6 RNU6-1332P-201ENST00000516666 104 ntBASIC2.88□□□□□ -1.95
SHFQ7M4L6 AC087854.1-201ENST00000519706 414 ntBASIC2.88□□□□□ -1.95
SHFQ7M4L6 AP005597.4-201ENST00000526762 229 ntBASIC2.88□□□□□ -1.95
SHFQ7M4L6 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.88□□□□□ -1.95
SHFQ7M4L6 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.88□□□□□ -1.95
SHFQ7M4L6 MIR4276-201ENST00000584832 70 ntBASIC2.88□□□□□ -1.95
SHFQ7M4L6 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.88□□□□□ -1.95
SHFQ7M4L6 AC243960.4-201ENST00000600532 288 ntBASIC2.88□□□□□ -1.95
SHFQ7M4L6 AL022345.1-201ENST00000607292 135 ntBASIC2.88□□□□□ -1.95
SHFQ7M4L6 AL132765.2-201ENST00000610812 351 ntBASIC2.88□□□□□ -1.95
SHFQ7M4L6 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.88□□□□□ -1.95
SHFQ7M4L6 RMST_7.1-201ENST00000621935 268 ntBASIC2.88□□□□□ -1.95
SHFQ7M4L6 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
SHFQ7M4L6 Z83843.1-201ENST00000604070 3685 ntBASIC2.88□□□□□ -1.95
SHFQ7M4L6 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.87□□□□□ -1.95
SHFQ7M4L6 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.87□□□□□ -1.95
SHFQ7M4L6 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
SHFQ7M4L6 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.87□□□□□ -1.95
SHFQ7M4L6 Y_RNA.212-201ENST00000364177 102 ntBASIC2.87□□□□□ -1.95
SHFQ7M4L6 Y_RNA.356-201ENST00000365475 113 ntBASIC2.87□□□□□ -1.95
SHFQ7M4L6 U8.9-201ENST00000365667 134 ntBASIC2.87□□□□□ -1.95
SHFQ7M4L6 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SHFQ7M4L6 MIR887-201ENST00000401258 79 ntBASIC2.87□□□□□ -1.95
SHFQ7M4L6 RPL5P18-201ENST00000406671 891 ntBASIC2.87□□□□□ -1.95
SHFQ7M4L6 RNU6-1077P-201ENST00000410506 102 ntBASIC2.87□□□□□ -1.95
SHFQ7M4L6 RN7SKP58-201ENST00000411010 305 ntBASIC2.87□□□□□ -1.95
SHFQ7M4L6 NDUFS5P4-201ENST00000412983 318 ntBASIC2.87□□□□□ -1.95
SHFQ7M4L6 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.87□□□□□ -1.95
SHFQ7M4L6 RPL7P37-201ENST00000425095 738 ntBASIC2.87□□□□□ -1.95
SHFQ7M4L6 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.87□□□□□ -1.95
SHFQ7M4L6 AL714022.1-201ENST00000439897 151 ntBASIC2.87□□□□□ -1.95
SHFQ7M4L6 CYCSP32-201ENST00000440548 321 ntBASIC2.87□□□□□ -1.95
SHFQ7M4L6 AC098831.1-201ENST00000440661 216 ntBASIC2.87□□□□□ -1.95
SHFQ7M4L6 AL133547.1-201ENST00000448546 220 ntBASIC2.87□□□□□ -1.95
SHFQ7M4L6 RPL37P4-201ENST00000448908 268 ntBASIC2.87□□□□□ -1.95
SHFQ7M4L6 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC2.87□□□□□ -1.95
SHFQ7M4L6 RPL26P9-201ENST00000457466 433 ntBASIC2.87□□□□□ -1.95
SHFQ7M4L6 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.87□□□□□ -1.95
SHFQ7M4L6 AC034236.1-201ENST00000469891 373 ntBASIC2.87□□□□□ -1.95
SHFQ7M4L6 AC006483.1-201ENST00000487308 313 ntBASIC2.87□□□□□ -1.95
SHFQ7M4L6 FGF7P4-201ENST00000509595 295 ntBASIC2.87□□□□□ -1.95
SHFQ7M4L6 Y_RNA.682-201ENST00000516457 100 ntBASIC2.87□□□□□ -1.95
SHFQ7M4L6 RNU6-566P-201ENST00000516790 107 ntBASIC2.87□□□□□ -1.95
SHFQ7M4L6 AC069113.1-201ENST00000517763 267 ntBASIC2.87□□□□□ -1.95
SHFQ7M4L6 IGKV3OR22-2-201ENST00000517943 313 ntBASIC2.87□□□□□ -1.95
SHFQ7M4L6 TRMT10BP1-201ENST00000519377 943 ntBASIC2.87□□□□□ -1.95
SHFQ7M4L6 AC025423.5-201ENST00000550230 219 ntBASIC2.87□□□□□ -1.95
SHFQ7M4L6 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.87□□□□□ -1.95
SHFQ7M4L6 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.87□□□□□ -1.95
SHFQ7M4L6 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.87□□□□□ -1.95
SHFQ7M4L6 HMGN2P15-201ENST00000585707 270 ntBASIC2.87□□□□□ -1.95
SHFQ7M4L6 AC024220.1-201ENST00000603675 484 ntBASIC2.87□□□□□ -1.95
SHFQ7M4L6 AC073657.2-201ENST00000605661 303 ntBASIC2.87□□□□□ -1.95
SHFQ7M4L6 RNU6-85P-201ENST00000605989 107 ntBASIC2.87□□□□□ -1.95
SHFQ7M4L6 uc_338.15-201ENST00000615470 191 ntBASIC2.87□□□□□ -1.95
SHFQ7M4L6 AC009233.1-201ENST00000616477 371 ntBASIC2.87□□□□□ -1.95
SHFQ7M4L6 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.87□□□□□ -1.95
SHFQ7M4L6 AC006111.3-201ENST00000622137 383 ntBASIC2.87□□□□□ -1.95
SHFQ7M4L6 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.87□□□□□ -1.95
SHFQ7M4L6 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.87□□□□□ -1.95
SHFQ7M4L6 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SHFQ7M4L6 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.86□□□□□ -1.95
SHFQ7M4L6 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SHFQ7M4L6 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.86□□□□□ -1.95
SHFQ7M4L6 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SHFQ7M4L6 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
SHFQ7M4L6 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
SHFQ7M4L6 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
SHFQ7M4L6 RNU1-64P-201ENST00000365443 163 ntBASIC2.86□□□□□ -1.95
SHFQ7M4L6 MIR518D-201ENST00000385014 87 ntBASIC2.86□□□□□ -1.95
SHFQ7M4L6 MT-TD-201ENST00000387419 68 ntBASIC2.86□□□□□ -1.95
SHFQ7M4L6 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms