Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 RNU6-76P-201ENST00000384060 104 ntBASIC3.13□□□□□ -1.91
ZNF549Q6P9A3 RNU6-190P-201ENST00000384154 102 ntBASIC3.13□□□□□ -1.91
ZNF549Q6P9A3 RNU6-574P-201ENST00000384265 107 ntBASIC3.13□□□□□ -1.91
ZNF549Q6P9A3 SNORA36C-201ENST00000384289 132 ntBASIC3.13□□□□□ -1.91
ZNF549Q6P9A3 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.13□□□□□ -1.91
ZNF549Q6P9A3 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.13□□□□□ -1.91
ZNF549Q6P9A3 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.13□□□□□ -1.91
ZNF549Q6P9A3 AL160275.3-201ENST00000423876 471 ntBASIC3.13□□□□□ -1.91
ZNF549Q6P9A3 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.13□□□□□ -1.91
ZNF549Q6P9A3 AC006946.1-201ENST00000429106 328 ntBASIC3.13□□□□□ -1.91
ZNF549Q6P9A3 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.13□□□□□ -1.91
ZNF549Q6P9A3 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.13□□□□□ -1.91
ZNF549Q6P9A3 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.13□□□□□ -1.91
ZNF549Q6P9A3 HIGD1AP11-201ENST00000438361 280 ntBASIC3.13□□□□□ -1.91
ZNF549Q6P9A3 AL035666.1-201ENST00000446195 348 ntBASIC3.13□□□□□ -1.91
ZNF549Q6P9A3 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.13□□□□□ -1.91
ZNF549Q6P9A3 RPL31P13-201ENST00000484151 370 ntBASIC3.13□□□□□ -1.91
ZNF549Q6P9A3 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.13□□□□□ -1.91
ZNF549Q6P9A3 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.13□□□□□ -1.91
ZNF549Q6P9A3 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
ZNF549Q6P9A3 AC097473.1-201ENST00000508142 408 ntBASIC3.13□□□□□ -1.91
ZNF549Q6P9A3 AC116337.1-201ENST00000509680 687 ntBASIC3.13□□□□□ -1.91
ZNF549Q6P9A3 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
ZNF549Q6P9A3 RNU6-976P-201ENST00000516086 111 ntBASIC3.13□□□□□ -1.91
ZNF549Q6P9A3 RNU6-390P-201ENST00000516259 103 ntBASIC3.13□□□□□ -1.91
ZNF549Q6P9A3 RNU6-1016P-201ENST00000516689 94 ntBASIC3.13□□□□□ -1.91
ZNF549Q6P9A3 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.13□□□□□ -1.91
ZNF549Q6P9A3 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.13□□□□□ -1.91
ZNF549Q6P9A3 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.13□□□□□ -1.91
ZNF549Q6P9A3 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.13□□□□□ -1.91
ZNF549Q6P9A3 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.13□□□□□ -1.91
ZNF549Q6P9A3 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.13□□□□□ -1.91
ZNF549Q6P9A3 MIR4680-201ENST00000580906 66 ntBASIC3.13□□□□□ -1.91
ZNF549Q6P9A3 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.13□□□□□ -1.91
ZNF549Q6P9A3 AC069200.1-201ENST00000609511 323 ntBASIC3.13□□□□□ -1.91
ZNF549Q6P9A3 SDR42E1P2-201ENST00000614861 481 ntBASIC3.13□□□□□ -1.91
ZNF549Q6P9A3 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.13□□□□□ -1.91
ZNF549Q6P9A3 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
ZNF549Q6P9A3 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.13□□□□□ -1.91
ZNF549Q6P9A3 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.13□□□□□ -1.91
ZNF549Q6P9A3 AC093908.1-201ENST00000623125 8092 ntBASIC3.13□□□□□ -1.91
ZNF549Q6P9A3 AL133383.2-201ENST00000622958 2336 ntBASIC3.13□□□□□ -1.91
ZNF549Q6P9A3 MTND5P1-201ENST00000445440 1375 ntBASIC3.12□□□□□ -1.91
ZNF549Q6P9A3 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
ZNF549Q6P9A3 SNORA7.2-201ENST00000364446 145 ntBASIC3.12□□□□□ -1.91
ZNF549Q6P9A3 RNU6-128P-201ENST00000383976 107 ntBASIC3.12□□□□□ -1.91
ZNF549Q6P9A3 RNU6-890P-201ENST00000384121 107 ntBASIC3.12□□□□□ -1.91
ZNF549Q6P9A3 Y_RNA.473-201ENST00000384333 102 ntBASIC3.12□□□□□ -1.91
ZNF549Q6P9A3 RNU6-95P-201ENST00000384697 107 ntBASIC3.12□□□□□ -1.91
ZNF549Q6P9A3 RNU6-817P-201ENST00000391083 104 ntBASIC3.12□□□□□ -1.91
ZNF549Q6P9A3 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
ZNF549Q6P9A3 MIR548F4-201ENST00000408515 105 ntBASIC3.12□□□□□ -1.91
ZNF549Q6P9A3 RNA5SP111-201ENST00000411386 101 ntBASIC3.12□□□□□ -1.91
ZNF549Q6P9A3 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.12□□□□□ -1.91
ZNF549Q6P9A3 RPS12P24-201ENST00000412619 387 ntBASIC3.12□□□□□ -1.91
ZNF549Q6P9A3 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.12□□□□□ -1.91
ZNF549Q6P9A3 MTATP6P4-201ENST00000427725 675 ntBASIC3.12□□□□□ -1.91
ZNF549Q6P9A3 AC005326.1-201ENST00000429197 123 ntBASIC3.12□□□□□ -1.91
ZNF549Q6P9A3 RPL23AP69-201ENST00000431134 458 ntBASIC3.12□□□□□ -1.91
ZNF549Q6P9A3 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.12□□□□□ -1.91
ZNF549Q6P9A3 RPL26P6-201ENST00000440913 438 ntBASIC3.12□□□□□ -1.91
ZNF549Q6P9A3 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.12□□□□□ -1.91
ZNF549Q6P9A3 RPL7P42-201ENST00000481005 679 ntBASIC3.12□□□□□ -1.91
ZNF549Q6P9A3 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.12□□□□□ -1.91
ZNF549Q6P9A3 PHBP14-201ENST00000512887 367 ntBASIC3.12□□□□□ -1.91
ZNF549Q6P9A3 Y_RNA.670-201ENST00000516255 105 ntBASIC3.12□□□□□ -1.91
ZNF549Q6P9A3 RNU6-1332P-201ENST00000516666 104 ntBASIC3.12□□□□□ -1.91
ZNF549Q6P9A3 RNU6-988P-201ENST00000519081 107 ntBASIC3.12□□□□□ -1.91
ZNF549Q6P9A3 OR5D17P-201ENST00000531492 978 ntBASIC3.12□□□□□ -1.91
ZNF549Q6P9A3 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.12□□□□□ -1.91
ZNF549Q6P9A3 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.12□□□□□ -1.91
ZNF549Q6P9A3 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.12□□□□□ -1.91
ZNF549Q6P9A3 AC100830.2-201ENST00000581636 240 ntBASIC3.12□□□□□ -1.91
ZNF549Q6P9A3 AC018462.2-201ENST00000605375 395 ntBASIC3.12□□□□□ -1.91
ZNF549Q6P9A3 AC107294.3-201ENST00000609211 526 ntBASIC3.12□□□□□ -1.91
ZNF549Q6P9A3 AC010378.1-201ENST00000619270 362 ntBASIC3.12□□□□□ -1.91
ZNF549Q6P9A3 AC091925.1-201ENST00000623204 462 ntBASIC3.12□□□□□ -1.91
ZNF549Q6P9A3 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
ZNF549Q6P9A3 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
ZNF549Q6P9A3 AC009812.4-201ENST00000569134 1805 ntBASIC3.12□□□□□ -1.91
ZNF549Q6P9A3 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ZNF549Q6P9A3 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
ZNF549Q6P9A3 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.11□□□□□ -1.91
ZNF549Q6P9A3 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
ZNF549Q6P9A3 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
ZNF549Q6P9A3 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
ZNF549Q6P9A3 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ZNF549Q6P9A3 SNORD3E-201ENST00000362899 217 ntBASIC3.11□□□□□ -1.91
ZNF549Q6P9A3 RNU6-1309P-201ENST00000363305 108 ntBASIC3.11□□□□□ -1.91
ZNF549Q6P9A3 SNORD46.1-201ENST00000364139 104 ntBASIC3.11□□□□□ -1.91
ZNF549Q6P9A3 RNU6-1303P-201ENST00000364841 107 ntBASIC3.11□□□□□ -1.91
ZNF549Q6P9A3 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
ZNF549Q6P9A3 RNU6-1032P-201ENST00000384100 107 ntBASIC3.11□□□□□ -1.91
ZNF549Q6P9A3 Y_RNA.463-201ENST00000384271 102 ntBASIC3.11□□□□□ -1.91
ZNF549Q6P9A3 Y_RNA.496-201ENST00000384444 101 ntBASIC3.11□□□□□ -1.91
ZNF549Q6P9A3 MIR607-201ENST00000385241 96 ntBASIC3.11□□□□□ -1.91
ZNF549Q6P9A3 RPS4XP7-201ENST00000406274 780 ntBASIC3.11□□□□□ -1.91
ZNF549Q6P9A3 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ZNF549Q6P9A3 Y_RNA.605-201ENST00000410577 105 ntBASIC3.11□□□□□ -1.91
ZNF549Q6P9A3 MCFD2P1-201ENST00000417812 300 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms