Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC034114.1-201ENST00000520293 285 ntBASIC0.01□□□□□ -2.41
VPS13DQ5THJ4 AC105224.1-201ENST00000587055 421 ntBASIC0.01□□□□□ -2.41
VPS13DQ5THJ4 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.01□□□□□ -2.41
VPS13DQ5THJ4 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.01□□□□□ -2.41
VPS13DQ5THJ4 U1.36-201ENST00000620684 176 ntBASIC0.01□□□□□ -2.41
VPS13DQ5THJ4 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC0.01□□□□□ -2.41
VPS13DQ5THJ4 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC0.01□□□□□ -2.41
VPS13DQ5THJ4 MIR424-201ENST00000362227 98 ntBASIC0.01□□□□□ -2.41
VPS13DQ5THJ4 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC0.01□□□□□ -2.41
VPS13DQ5THJ4 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC0.01□□□□□ -2.41
VPS13DQ5THJ4 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC0.01□□□□□ -2.41
VPS13DQ5THJ4 HNRNPDLP3-201ENST00000456745 380 ntBASIC0.01□□□□□ -2.41
VPS13DQ5THJ4 AC093677.1-201ENST00000514414 678 ntBASIC0.01□□□□□ -2.41
VPS13DQ5THJ4 AL713866.2-201ENST00000603579 219 ntBASIC0.01□□□□□ -2.41
VPS13DQ5THJ4 AC012557.2-201ENST00000605919 418 ntBASIC0.01□□□□□ -2.41
VPS13DQ5THJ4 AL132822.1-201ENST00000617063 513 ntBASIC0.01□□□□□ -2.41
VPS13DQ5THJ4 RNU6-39P-201ENST00000384344 107 ntBASIC0.01□□□□□ -2.41
VPS13DQ5THJ4 MIR493-201ENST00000385254 89 ntBASIC0.01□□□□□ -2.41
VPS13DQ5THJ4 OR51AB1P-201ENST00000429046 620 ntBASIC0.01□□□□□ -2.41
VPS13DQ5THJ4 AL359385.1-201ENST00000456509 365 ntBASIC0.01□□□□□ -2.41
VPS13DQ5THJ4 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.01□□□□□ -2.41
VPS13DQ5THJ4 RNU6-1004P-201ENST00000516584 111 ntBASIC0.01□□□□□ -2.41
VPS13DQ5THJ4 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.01□□□□□ -2.41
VPS13DQ5THJ4 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC0.01□□□□□ -2.41
VPS13DQ5THJ4 AC022254.1-201ENST00000567857 235 ntBASIC0.01□□□□□ -2.41
VPS13DQ5THJ4 MIR198-201ENST00000637333 62 ntBASIC0.01□□□□□ -2.41
VPS13DQ5THJ4 MTND5P30-201ENST00000452896 1731 ntBASIC0.01□□□□□ -2.41
VPS13DQ5THJ4 SNORA40.19-201ENST00000390846 128 ntBASIC0.01□□□□□ -2.41
VPS13DQ5THJ4 AL034374.1-201ENST00000406329 351 ntBASIC0.01□□□□□ -2.41
VPS13DQ5THJ4 AC010099.3-201ENST00000423896 409 ntBASIC0.01□□□□□ -2.41
VPS13DQ5THJ4 UBE2D3P2-201ENST00000424409 445 ntBASIC0.01□□□□□ -2.41
VPS13DQ5THJ4 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC0.01□□□□□ -2.41
VPS13DQ5THJ4 RN7SKP12-201ENST00000516275 143 ntBASIC0.01□□□□□ -2.41
VPS13DQ5THJ4 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.01□□□□□ -2.41
VPS13DQ5THJ4 AL355810.1-201ENST00000614629 552 ntBASIC0.01□□□□□ -2.41
VPS13DQ5THJ4 U4atac.1-201ENST00000618345 95 ntBASIC0.01□□□□□ -2.41
VPS13DQ5THJ4 RNU5D-1-201ENST00000363299 116 ntBASIC0□□□□□ -2.41
VPS13DQ5THJ4 RNU4-9P-201ENST00000364951 139 ntBASIC0□□□□□ -2.41
VPS13DQ5THJ4 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0□□□□□ -2.41
VPS13DQ5THJ4 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC0□□□□□ -2.41
VPS13DQ5THJ4 SCARNA16.5-201ENST00000517114 183 ntBASIC0□□□□□ -2.41
VPS13DQ5THJ4 AC073410.2-201ENST00000603240 332 ntBASIC0□□□□□ -2.41
VPS13DQ5THJ4 AL359314.1-201ENST00000616913 261 ntBASIC0□□□□□ -2.41
VPS13DQ5THJ4 AC116563.2-201ENST00000624751 535 ntBASIC0□□□□□ -2.41
VPS13DQ5THJ4 Y_RNA.552-201ENST00000384665 112 ntBASIC0□□□□□ -2.41
VPS13DQ5THJ4 MIR153-2-201ENST00000385225 87 ntBASIC0□□□□□ -2.41
VPS13DQ5THJ4 AC096649.2-201ENST00000416186 393 ntBASIC0□□□□□ -2.41
VPS13DQ5THJ4 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0□□□□□ -2.41
VPS13DQ5THJ4 MED14P1-201ENST00000430517 648 ntBASIC0□□□□□ -2.41
VPS13DQ5THJ4 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC0□□□□□ -2.41
VPS13DQ5THJ4 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC0□□□□□ -2.41
VPS13DQ5THJ4 MTATP6P9-201ENST00000515039 680 ntBASIC0□□□□□ -2.41
VPS13DQ5THJ4 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0□□□□□ -2.41
VPS13DQ5THJ4 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC-0□□□□□ -2.41
VPS13DQ5THJ4 RNA5SP368-201ENST00000364298 116 ntBASIC-0□□□□□ -2.41
VPS13DQ5THJ4 RNU6-629P-201ENST00000384061 103 ntBASIC-0□□□□□ -2.41
VPS13DQ5THJ4 RPS26P5-201ENST00000418544 335 ntBASIC-0□□□□□ -2.41
VPS13DQ5THJ4 RPS29P8-201ENST00000445109 171 ntBASIC-0□□□□□ -2.41
VPS13DQ5THJ4 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC-0□□□□□ -2.41
VPS13DQ5THJ4 RPL21P47-201ENST00000483696 477 ntBASIC-0□□□□□ -2.41
VPS13DQ5THJ4 AP004371.1-201ENST00000525240 214 ntBASIC-0□□□□□ -2.41
VPS13DQ5THJ4 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC-0□□□□□ -2.41
VPS13DQ5THJ4 RNA5SP125-201ENST00000364843 120 ntBASIC-0.01□□□□□ -2.41
VPS13DQ5THJ4 RNU6-546P-201ENST00000383991 107 ntBASIC-0.01□□□□□ -2.41
VPS13DQ5THJ4 HMGB1P17-201ENST00000403495 628 ntBASIC-0.01□□□□□ -2.41
VPS13DQ5THJ4 RNU2-36P-201ENST00000410361 191 ntBASIC-0.01□□□□□ -2.41
VPS13DQ5THJ4 NCOR1P3-201ENST00000420479 303 ntBASIC-0.01□□□□□ -2.41
VPS13DQ5THJ4 BET1P1-201ENST00000482276 359 ntBASIC-0.01□□□□□ -2.41
VPS13DQ5THJ4 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC-0.01□□□□□ -2.41
VPS13DQ5THJ4 MIR5739-201ENST00000619803 80 ntBASIC-0.01□□□□□ -2.41
VPS13DQ5THJ4 RNU6-197P-201ENST00000516680 100 ntBASIC-0.01□□□□□ -2.41
VPS13DQ5THJ4 AC068276.1-201ENST00000605793 379 ntBASIC-0.01□□□□□ -2.41
VPS13DQ5THJ4 AC018638.7-201ENST00000605836 1114 ntBASIC-0.01□□□□□ -2.41
VPS13DQ5THJ4 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC-0.01□□□□□ -2.41
VPS13DQ5THJ4 AC096656.1-201ENST00000623826 1364 ntBASIC-0.01□□□□□ -2.41
VPS13DQ5THJ4 SNORD114-31-201ENST00000363219 75 ntBASIC-0.01□□□□□ -2.41
VPS13DQ5THJ4 U3.13-201ENST00000364804 214 ntBASIC-0.01□□□□□ -2.41
VPS13DQ5THJ4 RPS24P7-201ENST00000416921 246 ntBASIC-0.01□□□□□ -2.41
VPS13DQ5THJ4 FGF7P5-201ENST00000441829 291 ntBASIC-0.01□□□□□ -2.41
VPS13DQ5THJ4 snoU13.9-201ENST00000458927 103 ntBASIC-0.01□□□□□ -2.41
VPS13DQ5THJ4 AC069114.2-201ENST00000604699 304 ntBASIC-0.01□□□□□ -2.41
VPS13DQ5THJ4 AC093838.1-201ENST00000613014 469 ntBASIC-0.01□□□□□ -2.41
VPS13DQ5THJ4 AC009950.2-201ENST00000636548 183 ntBASIC-0.01□□□□□ -2.41
VPS13DQ5THJ4 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC-0.01□□□□□ -2.41
VPS13DQ5THJ4 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC-0.01□□□□□ -2.41
VPS13DQ5THJ4 RNU6-1305P-201ENST00000364353 104 ntBASIC-0.01□□□□□ -2.41
VPS13DQ5THJ4 MIR1302-8-201ENST00000408342 128 ntBASIC-0.01□□□□□ -2.41
VPS13DQ5THJ4 AC069282.1-201ENST00000411911 526 ntBASIC-0.01□□□□□ -2.41
VPS13DQ5THJ4 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC-0.01□□□□□ -2.41
VPS13DQ5THJ4 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC-0.01□□□□□ -2.41
VPS13DQ5THJ4 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC-0.01□□□□□ -2.41
VPS13DQ5THJ4 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC-0.01□□□□□ -2.41
VPS13DQ5THJ4 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC-0.01□□□□□ -2.41
VPS13DQ5THJ4 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC-0.01□□□□□ -2.41
VPS13DQ5THJ4 AC004923.2-201ENST00000529649 369 ntBASIC-0.01□□□□□ -2.41
VPS13DQ5THJ4 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC-0.01□□□□□ -2.41
VPS13DQ5THJ4 AL159152.1-201ENST00000635019 2587 ntBASIC-0.02□□□□□ -2.41
VPS13DQ5THJ4 RNU6-48P-201ENST00000384161 107 ntBASIC-0.02□□□□□ -2.41
VPS13DQ5THJ4 MIR506-201ENST00000384998 124 ntBASIC-0.02□□□□□ -2.41
VPS13DQ5THJ4 RNA5SP451-201ENST00000410588 110 ntBASIC-0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms