Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 MIR1295A-201ENST00000408463 79 ntBASIC0.1□□□□□ -2.39
UBR4Q5T4S7 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.1□□□□□ -2.39
UBR4Q5T4S7 BPY2DP-201ENST00000422208 265 ntBASIC0.1□□□□□ -2.39
UBR4Q5T4S7 AC013410.2-201ENST00000422627 201 ntBASIC0.1□□□□□ -2.39
UBR4Q5T4S7 MRPS36P4-201ENST00000534436 298 ntBASIC0.1□□□□□ -2.39
UBR4Q5T4S7 AK6-205ENST00000618980 483 ntTSL 2 BASIC0.1□□□□□ -2.39
UBR4Q5T4S7 AL512506.2-201ENST00000624472 458 ntBASIC0.1□□□□□ -2.39
UBR4Q5T4S7 SNORA25.8-201ENST00000364831 128 ntBASIC0.09□□□□□ -2.39
UBR4Q5T4S7 SNORD75.1-201ENST00000408373 60 ntBASIC0.09□□□□□ -2.39
UBR4Q5T4S7 MTND4LP21-201ENST00000415303 295 ntBASIC0.09□□□□□ -2.39
UBR4Q5T4S7 RPL30P13-201ENST00000418873 348 ntBASIC0.09□□□□□ -2.39
UBR4Q5T4S7 MIR3690-201ENST00000580266 75 ntBASIC0.09□□□□□ -2.39
UBR4Q5T4S7 MIR4422-201ENST00000581938 83 ntBASIC0.09□□□□□ -2.39
UBR4Q5T4S7 AC098614.4-201ENST00000607601 462 ntBASIC0.09□□□□□ -2.39
UBR4Q5T4S7 Y_RNA.313-201ENST00000365095 103 ntBASIC0.09□□□□□ -2.39
UBR4Q5T4S7 MIR124-2-201ENST00000385081 109 ntBASIC0.09□□□□□ -2.39
UBR4Q5T4S7 PRELID3BP11-201ENST00000414230 479 ntBASIC0.09□□□□□ -2.39
UBR4Q5T4S7 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC0.09□□□□□ -2.39
UBR4Q5T4S7 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.09□□□□□ -2.39
UBR4Q5T4S7 RPL31P3-201ENST00000458430 332 ntBASIC0.09□□□□□ -2.39
UBR4Q5T4S7 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.09□□□□□ -2.39
UBR4Q5T4S7 AC093770.1-201ENST00000511559 571 ntBASIC0.09□□□□□ -2.39
UBR4Q5T4S7 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC0.09□□□□□ -2.39
UBR4Q5T4S7 RNU6-322P-201ENST00000516010 103 ntBASIC0.09□□□□□ -2.39
UBR4Q5T4S7 MIR4667-201ENST00000578933 66 ntBASIC0.09□□□□□ -2.39
UBR4Q5T4S7 OR1M4P-201ENST00000589199 287 ntBASIC0.09□□□□□ -2.39
UBR4Q5T4S7 AC018618.2-201ENST00000604770 446 ntBASIC0.09□□□□□ -2.39
UBR4Q5T4S7 MIR411-201ENST00000362239 96 ntBASIC0.09□□□□□ -2.4
UBR4Q5T4S7 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.09□□□□□ -2.4
UBR4Q5T4S7 HMGN2P30-201ENST00000423237 256 ntBASIC0.09□□□□□ -2.4
UBR4Q5T4S7 FAM60BP-201ENST00000578364 658 ntBASIC0.09□□□□□ -2.4
UBR4Q5T4S7 SNORA38-201ENST00000363946 132 ntBASIC0.09□□□□□ -2.4
UBR4Q5T4S7 SNORA3A-201ENST00000364113 130 ntBASIC0.09□□□□□ -2.4
UBR4Q5T4S7 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC0.09□□□□□ -2.4
UBR4Q5T4S7 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC0.09□□□□□ -2.4
UBR4Q5T4S7 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC0.09□□□□□ -2.4
UBR4Q5T4S7 RNU6-84P-201ENST00000607737 102 ntBASIC0.09□□□□□ -2.4
UBR4Q5T4S7 DHFRP6-201ENST00000401776 268 ntBASIC0.08□□□□□ -2.4
UBR4Q5T4S7 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC0.08□□□□□ -2.4
UBR4Q5T4S7 AL669831.1-202ENST00000428504 417 ntBASIC0.08□□□□□ -2.4
UBR4Q5T4S7 GTF2IP13-201ENST00000438487 386 ntBASIC0.08□□□□□ -2.4
UBR4Q5T4S7 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC0.08□□□□□ -2.4
UBR4Q5T4S7 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC0.08□□□□□ -2.4
UBR4Q5T4S7 AC133963.2-201ENST00000513686 578 ntBASIC0.08□□□□□ -2.4
UBR4Q5T4S7 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC0.08□□□□□ -2.4
UBR4Q5T4S7 MIR3678-201ENST00000578455 94 ntBASIC0.08□□□□□ -2.4
UBR4Q5T4S7 RNU4-5P-201ENST00000607255 135 ntBASIC0.08□□□□□ -2.4
UBR4Q5T4S7 AC022202.1-201ENST00000613515 211 ntBASIC0.08□□□□□ -2.4
UBR4Q5T4S7 Y_RNA.245-201ENST00000364493 95 ntBASIC0.08□□□□□ -2.4
UBR4Q5T4S7 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC0.08□□□□□ -2.4
UBR4Q5T4S7 AC243772.1-201ENST00000451620 410 ntBASIC0.08□□□□□ -2.4
UBR4Q5T4S7 AL513343.1-201ENST00000451818 792 ntBASIC0.08□□□□□ -2.4
UBR4Q5T4S7 PSMC1P5-201ENST00000512850 177 ntBASIC0.08□□□□□ -2.4
UBR4Q5T4S7 AC017083.3-201ENST00000609955 700 ntBASIC0.08□□□□□ -2.4
UBR4Q5T4S7 RNA5SP214-201ENST00000363378 118 ntBASIC0.08□□□□□ -2.4
UBR4Q5T4S7 RNU6-920P-201ENST00000410926 92 ntBASIC0.08□□□□□ -2.4
UBR4Q5T4S7 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC0.08□□□□□ -2.4
UBR4Q5T4S7 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC0.08□□□□□ -2.4
UBR4Q5T4S7 MRPL42P4-201ENST00000453267 443 ntBASIC0.08□□□□□ -2.4
UBR4Q5T4S7 RPS26P45-201ENST00000471748 340 ntBASIC0.08□□□□□ -2.4
UBR4Q5T4S7 uc_338.34-201ENST00000617467 174 ntBASIC0.08□□□□□ -2.4
UBR4Q5T4S7 uc_338.36-201ENST00000622331 158 ntBASIC0.08□□□□□ -2.4
UBR4Q5T4S7 AL359704.1-201ENST00000411586 781 ntBASIC0.08□□□□□ -2.4
UBR4Q5T4S7 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC0.08□□□□□ -2.4
UBR4Q5T4S7 AC245047.7-201ENST00000440265 293 ntBASIC0.08□□□□□ -2.4
UBR4Q5T4S7 AC008834.1-201ENST00000511612 175 ntBASIC0.08□□□□□ -2.4
UBR4Q5T4S7 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC0.08□□□□□ -2.4
UBR4Q5T4S7 AC090132.2-201ENST00000615881 347 ntBASIC0.08□□□□□ -2.4
UBR4Q5T4S7 RNU6-24P-201ENST00000384440 107 ntBASIC0.07□□□□□ -2.4
UBR4Q5T4S7 SNORA1.3-201ENST00000384676 136 ntBASIC0.07□□□□□ -2.4
UBR4Q5T4S7 SNORA16.2-201ENST00000390991 127 ntBASIC0.07□□□□□ -2.4
UBR4Q5T4S7 RAP1BP3-201ENST00000407180 549 ntBASIC0.07□□□□□ -2.4
UBR4Q5T4S7 AC096920.1-201ENST00000423991 241 ntBASIC0.07□□□□□ -2.4
UBR4Q5T4S7 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.07□□□□□ -2.4
UBR4Q5T4S7 AC092685.1-201ENST00000447960 1243 ntBASIC0.07□□□□□ -2.4
UBR4Q5T4S7 AL589880.1-201ENST00000448271 287 ntBASIC0.07□□□□□ -2.4
UBR4Q5T4S7 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
UBR4Q5T4S7 RNA5SP404-201ENST00000517118 132 ntBASIC0.07□□□□□ -2.4
UBR4Q5T4S7 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC0.07□□□□□ -2.4
UBR4Q5T4S7 MIR3117-201ENST00000584034 78 ntBASIC0.07□□□□□ -2.4
UBR4Q5T4S7 LLPHP1-201ENST00000603571 367 ntBASIC0.07□□□□□ -2.4
UBR4Q5T4S7 AL773524.1-201ENST00000614065 229 ntBASIC0.07□□□□□ -2.4
UBR4Q5T4S7 RNU4-42P-201ENST00000364738 142 ntBASIC0.07□□□□□ -2.4
UBR4Q5T4S7 RNU1-36P-201ENST00000365130 165 ntBASIC0.07□□□□□ -2.4
UBR4Q5T4S7 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC0.07□□□□□ -2.4
UBR4Q5T4S7 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC0.07□□□□□ -2.4
UBR4Q5T4S7 AC244505.3-201ENST00000454598 187 ntBASIC0.07□□□□□ -2.4
UBR4Q5T4S7 AC107953.1-201ENST00000522216 297 ntBASIC0.07□□□□□ -2.4
UBR4Q5T4S7 NAP1L1P1-201ENST00000524793 1063 ntBASIC0.07□□□□□ -2.4
UBR4Q5T4S7 HSBP1P1-201ENST00000555205 166 ntBASIC0.07□□□□□ -2.4
UBR4Q5T4S7 AC074051.3-201ENST00000570238 358 ntBASIC0.07□□□□□ -2.4
UBR4Q5T4S7 AC012254.4-201ENST00000588843 273 ntBASIC0.07□□□□□ -2.4
UBR4Q5T4S7 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC0.07□□□□□ -2.4
UBR4Q5T4S7 VN1R81P-201ENST00000602085 372 ntBASIC0.07□□□□□ -2.4
UBR4Q5T4S7 AL513534.2-201ENST00000603836 250 ntBASIC0.07□□□□□ -2.4
UBR4Q5T4S7 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC0.07□□□□□ -2.4
UBR4Q5T4S7 MIR100-201ENST00000385259 80 ntBASIC0.07□□□□□ -2.4
UBR4Q5T4S7 AC245047.4-201ENST00000433189 144 ntBASIC0.07□□□□□ -2.4
UBR4Q5T4S7 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC0.07□□□□□ -2.4
UBR4Q5T4S7 SNORD126-201ENST00000459475 77 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms