| CDKL4 | Q5MAI5 | AC126365.2-201 | ENST00000580630 | 379 nt | BASIC | 1.34 | □□□□□ -2.19 | | |
| CDKL4 | Q5MAI5 | ZNF72P-201 | ENST00000425869 | 1908 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | RNU6-1010P-201 | ENST00000362757 | 107 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | RNU6-546P-201 | ENST00000383991 | 107 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | BTF3L4P2-201 | ENST00000392798 | 346 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | AL133475.1-201 | ENST00000404414 | 305 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | MIR1262-201 | ENST00000408276 | 93 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | RNU2-32P-201 | ENST00000411193 | 191 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | AL645937.4-201 | ENST00000419702 | 389 nt | TSL 2 BASIC | 1.33 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | SNRPEP7-201 | ENST00000438350 | 220 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | AC006458.1-201 | ENST00000445093 | 653 nt | TSL 3 BASIC | 1.33 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | AL360091.2-201 | ENST00000446847 | 650 nt | TSL 5 BASIC | 1.33 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | MEMO1P3-201 | ENST00000459811 | 302 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | AC106821.1-201 | ENST00000502861 | 572 nt | TSL 5 BASIC | 1.33 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | AC010387.1-201 | ENST00000507526 | 487 nt | TSL 2 BASIC | 1.33 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | LINC02514-201 | ENST00000509058 | 498 nt | TSL 3 BASIC | 1.33 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | RNA5SP61-201 | ENST00000516453 | 100 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | AC015712.3-201 | ENST00000559380 | 164 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | AC025754.2-201 | ENST00000606491 | 432 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | MIR8074-201 | ENST00000615081 | 81 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | ZNF209P-201 | ENST00000593450 | 2304 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | ATP11C-202 | ENST00000361648 | 6010 nt | APPRIS ALT2 TSL 1 (best) BASIC | 1.32 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | RNU6-529P-201 | ENST00000363383 | 104 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | MIR518D-201 | ENST00000385014 | 87 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | MIR764-201 | ENST00000390811 | 85 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | RNU6-174P-201 | ENST00000410406 | 106 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | RPL30P13-201 | ENST00000418873 | 348 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | TIMM9P2-201 | ENST00000419324 | 266 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | AL590705.2-201 | ENST00000420204 | 281 nt | TSL 5 BASIC | 1.32 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | AC008267.5-201 | ENST00000424928 | 265 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | AC003084.1-201 | ENST00000427030 | 435 nt | TSL 5 BASIC | 1.32 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | SDAD1P3-201 | ENST00000427380 | 333 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | LINC00446-202 | ENST00000438327 | 357 nt | TSL 3 BASIC | 1.32 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | AC007879.4-201 | ENST00000440545 | 361 nt | TSL 3 BASIC | 1.32 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | AC073325.1-201 | ENST00000443714 | 542 nt | TSL 4 BASIC | 1.32 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | AL356272.1-201 | ENST00000454538 | 832 nt | TSL 2 BASIC | 1.32 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | RNU7-59P-201 | ENST00000459101 | 61 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | MTCYBP35-201 | ENST00000503630 | 1137 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | AC117532.1-201 | ENST00000514638 | 323 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | AC026991.1-201 | ENST00000520815 | 463 nt | TSL 3 BASIC | 1.32 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | NARSP2-202 | ENST00000522022 | 349 nt | TSL 3 BASIC | 1.32 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | MTERF3-203 | ENST00000522822 | 1148 nt | TSL 2 BASIC | 1.32 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | AP005660.1-201 | ENST00000522972 | 293 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | AC021451.1-201 | ENST00000523498 | 1129 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | DEFB130C-202 | ENST00000530001 | 230 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | LINC00301-204 | ENST00000532591 | 470 nt | TSL 2 BASIC | 1.32 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | AL160236.1-201 | ENST00000556317 | 195 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | AC009754.1-201 | ENST00000566282 | 540 nt | TSL 4 BASIC | 1.32 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | AC091588.1-201 | ENST00000578504 | 359 nt | TSL 3 BASIC | 1.32 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | DLGAP1-AS4-201 | ENST00000582054 | 757 nt | TSL 5 BASIC | 1.32 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | SLC25A46-206 | ENST00000509432 | 1596 nt | TSL 2 BASIC | 1.32 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | JMJD1C-212 | ENST00000639129 | 7901 nt | APPRIS ALT2 TSL 5 BASIC | 1.32 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | C9orf84-204 | ENST00000394777 | 4955 nt | APPRIS ALT2 TSL 1 (best) BASIC | 1.31 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | AC233981.2-201 | ENST00000611524 | 1614 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | ZNF29P-201 | ENST00000225587 | 168 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | HTN1-201 | ENST00000246896 | 580 nt | APPRIS P1 TSL 1 (best) BASIC | 1.31 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | RNU1-17P-201 | ENST00000363022 | 152 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | RNU6-203P-201 | ENST00000384038 | 104 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | SNORD26-201 | ENST00000384147 | 75 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | MIR597-201 | ENST00000384968 | 97 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | SNORA48.1-201 | ENST00000390879 | 135 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | AC079150.1-201 | ENST00000413043 | 383 nt | TSL 3 BASIC | 1.31 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | LINC00459-201 | ENST00000431656 | 376 nt | TSL 2 BASIC | 1.31 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | RPL23AP76-201 | ENST00000441860 | 458 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | AC017099.1-201 | ENST00000448261 | 1028 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | AL135787.1-201 | ENST00000450154 | 302 nt | TSL 3 BASIC | 1.31 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | AL590365.1-201 | ENST00000450788 | 243 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | HESX1-202 | ENST00000473921 | 757 nt | TSL 5 BASIC | 1.31 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | RPF2P2-201 | ENST00000504693 | 896 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | RNU2-53P-201 | ENST00000516257 | 147 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | SUB1P3-201 | ENST00000564581 | 315 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | RBBP8-210 | ENST00000581687 | 617 nt | TSL 2 BASIC | 1.31 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | AC060771.1-201 | ENST00000582031 | 164 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | AC009977.1-201 | ENST00000586015 | 570 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | WISP1-OT1-201 | ENST00000602893 | 642 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | AL670379.6-201 | ENST00000603753 | 252 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | AL670379.11-201 | ENST00000604059 | 253 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | AC008162.1-201 | ENST00000604718 | 254 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | AL670379.1-201 | ENST00000604752 | 252 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | AL670379.2-201 | ENST00000604983 | 252 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | AL670379.5-201 | ENST00000605253 | 252 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | AL670379.4-201 | ENST00000605279 | 254 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | AL670379.12-201 | ENST00000605291 | 253 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | AL670379.8-201 | ENST00000605353 | 252 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | AC123912.5-201 | ENST00000605470 | 343 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | AL670379.7-201 | ENST00000605823 | 252 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | AC090970.3-201 | ENST00000612566 | 866 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | GNAS-AS1_4.1-201 | ENST00000616546 | 112 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | AL132822.1-201 | ENST00000617063 | 513 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | AL353997.5-201 | ENST00000618886 | 171 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | PRPSAP2-229 | ENST00000628609 | 192 nt | TSL 5 BASIC | 1.31 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | AL807742.1-203 | ENST00000637444 | 759 nt | TSL 5 BASIC | 1.31 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | MGAT4C-209 | ENST00000611864 | 25116 nt | APPRIS P1 TSL 5 BASIC | 1.31 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | DDX43P2-201 | ENST00000604753 | 1354 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | FKTN-204 | ENST00000448551 | 1700 nt | TSL 2 BASIC | 1.3 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | RNU6-1164P-201 | ENST00000364428 | 107 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | RNU6-898P-201 | ENST00000365627 | 104 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | FAM206A-202 | ENST00000374624 | 499 nt | TSL 3 BASIC | 1.3 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | CD80-202 | ENST00000383669 | 771 nt | TSL 1 (best) BASIC | 1.3 | □□□□□ -2.2 | | |
| CDKL4 | Q5MAI5 | TRAJ39-201 | ENST00000390498 | 63 nt | APPRIS P1 BASIC | 1.3 | □□□□□ -2.2 | | |