Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 RNA5SP197-201ENST00000363357 119 ntBASIC3.91□□□□□ -1.78
CCDC178Q5BJE1 Y_RNA.128-201ENST00000363391 112 ntBASIC3.91□□□□□ -1.78
CCDC178Q5BJE1 Y_RNA.245-201ENST00000364493 95 ntBASIC3.91□□□□□ -1.78
CCDC178Q5BJE1 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CCDC178Q5BJE1 Y_RNA.480-201ENST00000384364 102 ntBASIC3.91□□□□□ -1.78
CCDC178Q5BJE1 MIR559-201ENST00000385188 96 ntBASIC3.91□□□□□ -1.78
CCDC178Q5BJE1 RNU6-308P-201ENST00000390957 107 ntBASIC3.91□□□□□ -1.78
CCDC178Q5BJE1 SNORA75.4-201ENST00000391278 119 ntBASIC3.91□□□□□ -1.78
CCDC178Q5BJE1 AL360182.1-201ENST00000397433 468 ntBASIC3.91□□□□□ -1.78
CCDC178Q5BJE1 AL356968.1-201ENST00000416622 474 ntBASIC3.91□□□□□ -1.78
CCDC178Q5BJE1 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC178Q5BJE1 AL359672.1-201ENST00000442302 409 ntBASIC3.91□□□□□ -1.78
CCDC178Q5BJE1 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC178Q5BJE1 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.91□□□□□ -1.78
CCDC178Q5BJE1 MTCO3P10-201ENST00000455912 772 ntBASIC3.91□□□□□ -1.78
CCDC178Q5BJE1 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.91□□□□□ -1.78
CCDC178Q5BJE1 KC877373.1-201ENST00000479066 408 ntBASIC3.91□□□□□ -1.78
CCDC178Q5BJE1 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.91□□□□□ -1.78
CCDC178Q5BJE1 AL157871.3-201ENST00000557231 293 ntBASIC3.91□□□□□ -1.78
CCDC178Q5BJE1 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC178Q5BJE1 MIR4425-201ENST00000580572 84 ntBASIC3.91□□□□□ -1.78
CCDC178Q5BJE1 AL360085.1-201ENST00000604713 532 ntBASIC3.91□□□□□ -1.78
CCDC178Q5BJE1 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.91□□□□□ -1.78
CCDC178Q5BJE1 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC178Q5BJE1 AC048347.1-201ENST00000624621 427 ntBASIC3.91□□□□□ -1.78
CCDC178Q5BJE1 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC178Q5BJE1 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.9□□□□□ -1.78
CCDC178Q5BJE1 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
CCDC178Q5BJE1 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
CCDC178Q5BJE1 AC093908.1-201ENST00000623125 8092 ntBASIC3.9□□□□□ -1.78
CCDC178Q5BJE1 Y_RNA.33-201ENST00000362591 102 ntBASIC3.9□□□□□ -1.79
CCDC178Q5BJE1 SNORD46.1-201ENST00000364139 104 ntBASIC3.9□□□□□ -1.79
CCDC178Q5BJE1 SNORD42.2-201ENST00000365570 69 ntBASIC3.9□□□□□ -1.79
CCDC178Q5BJE1 RNVU1-14-201ENST00000384770 164 ntBASIC3.9□□□□□ -1.79
CCDC178Q5BJE1 SNORD73A-201ENST00000386062 65 ntBASIC3.9□□□□□ -1.79
CCDC178Q5BJE1 MIR1290-201ENST00000408735 78 ntBASIC3.9□□□□□ -1.79
CCDC178Q5BJE1 RNU6-1025P-201ENST00000410629 104 ntBASIC3.9□□□□□ -1.79
CCDC178Q5BJE1 Z85995.1-201ENST00000415547 335 ntBASIC3.9□□□□□ -1.79
CCDC178Q5BJE1 AC245054.2-201ENST00000415639 319 ntBASIC3.9□□□□□ -1.79
CCDC178Q5BJE1 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.9□□□□□ -1.79
CCDC178Q5BJE1 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC178Q5BJE1 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.9□□□□□ -1.79
CCDC178Q5BJE1 MTND4P19-201ENST00000446659 478 ntBASIC3.9□□□□□ -1.79
CCDC178Q5BJE1 MIR2053-201ENST00000459295 91 ntBASIC3.9□□□□□ -1.79
CCDC178Q5BJE1 Y_RNA.631-201ENST00000459607 101 ntBASIC3.9□□□□□ -1.79
CCDC178Q5BJE1 AC091153.1-201ENST00000466297 402 ntBASIC3.9□□□□□ -1.79
CCDC178Q5BJE1 AC096576.1-201ENST00000489014 359 ntBASIC3.9□□□□□ -1.79
CCDC178Q5BJE1 AL160314.1-201ENST00000490836 438 ntBASIC3.9□□□□□ -1.79
CCDC178Q5BJE1 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC178Q5BJE1 AC096745.1-201ENST00000509945 370 ntBASIC3.9□□□□□ -1.79
CCDC178Q5BJE1 AC010265.1-201ENST00000513509 211 ntBASIC3.9□□□□□ -1.79
CCDC178Q5BJE1 RNU6-1016P-201ENST00000516689 94 ntBASIC3.9□□□□□ -1.79
CCDC178Q5BJE1 AC069113.1-201ENST00000517763 267 ntBASIC3.9□□□□□ -1.79
CCDC178Q5BJE1 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.9□□□□□ -1.79
CCDC178Q5BJE1 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.9□□□□□ -1.79
CCDC178Q5BJE1 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.9□□□□□ -1.79
CCDC178Q5BJE1 AC090132.2-201ENST00000615881 347 ntBASIC3.9□□□□□ -1.79
CCDC178Q5BJE1 PISRT1.1-201ENST00000616930 107 ntBASIC3.9□□□□□ -1.79
CCDC178Q5BJE1 AL669831.3-213ENST00000636676 183 ntBASIC3.9□□□□□ -1.79
CCDC178Q5BJE1 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.9□□□□□ -1.79
CCDC178Q5BJE1 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC178Q5BJE1 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.9□□□□□ -1.79
CCDC178Q5BJE1 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC178Q5BJE1 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC178Q5BJE1 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
CCDC178Q5BJE1 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
CCDC178Q5BJE1 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC178Q5BJE1 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC178Q5BJE1 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC178Q5BJE1 RNU6-95P-201ENST00000384697 107 ntBASIC3.89□□□□□ -1.79
CCDC178Q5BJE1 RPL5P18-201ENST00000406671 891 ntBASIC3.89□□□□□ -1.79
CCDC178Q5BJE1 RPS15AP6-201ENST00000420703 385 ntBASIC3.89□□□□□ -1.79
CCDC178Q5BJE1 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC178Q5BJE1 RPL31P12-201ENST00000422587 358 ntBASIC3.89□□□□□ -1.79
CCDC178Q5BJE1 MTND2P23-201ENST00000422990 651 ntBASIC3.89□□□□□ -1.79
CCDC178Q5BJE1 AL590383.1-201ENST00000428602 75 ntBASIC3.89□□□□□ -1.79
CCDC178Q5BJE1 NIPA2P5-201ENST00000452282 464 ntBASIC3.89□□□□□ -1.79
CCDC178Q5BJE1 CECR9-201ENST00000453421 199 ntBASIC3.89□□□□□ -1.79
CCDC178Q5BJE1 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC178Q5BJE1 RNU7-138P-201ENST00000459479 64 ntBASIC3.89□□□□□ -1.79
CCDC178Q5BJE1 RPS20P22-201ENST00000473700 357 ntBASIC3.89□□□□□ -1.79
CCDC178Q5BJE1 AC022493.1-201ENST00000492984 337 ntBASIC3.89□□□□□ -1.79
CCDC178Q5BJE1 AC026801.1-201ENST00000497178 464 ntBASIC3.89□□□□□ -1.79
CCDC178Q5BJE1 MTCYBP40-201ENST00000509390 1135 ntBASIC3.89□□□□□ -1.79
CCDC178Q5BJE1 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC178Q5BJE1 RNA5SP291-201ENST00000517222 105 ntBASIC3.89□□□□□ -1.79
CCDC178Q5BJE1 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC178Q5BJE1 MTCO3P13-201ENST00000577757 781 ntBASIC3.89□□□□□ -1.79
CCDC178Q5BJE1 MIR1273C-201ENST00000578669 77 ntBASIC3.89□□□□□ -1.79
CCDC178Q5BJE1 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC178Q5BJE1 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC178Q5BJE1 ELOCP5-201ENST00000604924 333 ntBASIC3.89□□□□□ -1.79
CCDC178Q5BJE1 uc_338.1-201ENST00000612113 180 ntBASIC3.89□□□□□ -1.79
CCDC178Q5BJE1 AL157817.1-201ENST00000614264 790 ntBASIC3.89□□□□□ -1.79
CCDC178Q5BJE1 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC178Q5BJE1 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
CCDC178Q5BJE1 KPNA2P1-201ENST00000458289 1591 ntBASIC3.89□□□□□ -1.79
CCDC178Q5BJE1 SNORD3E-201ENST00000362899 217 ntBASIC3.88□□□□□ -1.79
CCDC178Q5BJE1 Y_RNA.187-201ENST00000363918 113 ntBASIC3.88□□□□□ -1.79
CCDC178Q5BJE1 RNU6-310P-201ENST00000384655 107 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms